RNA–Protein interactions for RNA: ENST00000552890.5

TRAFD1-208, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 1,043 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-208ENST00000552890 TAF1LQ8IZX4 1826 aa13.32□□□□□ -0.28
TRAFD1-208ENST00000552890 UBR2Q8IWV8 1755 aa13.31□□□□□ -0.28
TRAFD1-208ENST00000552890 KCPQ6ZWJ8 1503 aa13.31□□□□□ -0.28
TRAFD1-208ENST00000552890 EIF4A1P60842 406 aaKnown RBP13.31□□□□□ -0.28
TRAFD1-208ENST00000552890 CCDC184Q52MB2 194 aa13.31□□□□□ -0.28
TRAFD1-208ENST00000552890 WWC1Q8IX03 1113 aa13.31□□□□□ -0.28
TRAFD1-208ENST00000552890 PNPLA7Q6ZV29 1317 aa13.31□□□□□ -0.28
TRAFD1-208ENST00000552890 DCAF8L1A6NGE4 600 aa13.3□□□□□ -0.28
TRAFD1-208ENST00000552890 GIGYF1O75420 1035 aaPredicted RBP13.3□□□□□ -0.28
TRAFD1-208ENST00000552890 KCNQ4P56696 695 aa13.3□□□□□ -0.28
TRAFD1-208ENST00000552890 SLC4A9Q96Q91 983 aa13.3□□□□□ -0.28
TRAFD1-208ENST00000552890 ZNF652Q9Y2D9 606 aa13.3□□□□□ -0.28
TRAFD1-208ENST00000552890 LAS1LQ9Y4W2 734 aaKnown RBP13.3□□□□□ -0.28
TRAFD1-208ENST00000552890 PHF14O94880 888 aa13.28□□□□□ -0.28
TRAFD1-208ENST00000552890 ZNF853P0CG23 659 aa13.28□□□□□ -0.28
TRAFD1-208ENST00000552890 INTS5Q6P9B9 1019 aaKnown RBP13.28□□□□□ -0.28
TRAFD1-208ENST00000552890 CLEC4GQ6UXB4 293 aa13.28□□□□□ -0.28
TRAFD1-208ENST00000552890 COL23A1Q86Y22 540 aaPredicted RBP13.28□□□□□ -0.28
TRAFD1-208ENST00000552890 THUMPD2Q9BTF0 503 aaKnown RBP13.28□□□□□ -0.28
TRAFD1-208ENST00000552890 EIF5P55010 431 aaKnown RBP13.27□□□□□ -0.29
TRAFD1-208ENST00000552890 GOLGA2Q08379 1002 aa13.27□□□□□ -0.29
TRAFD1-208ENST00000552890 ARHGEF1Q92888 912 aaKnown RBP13.27□□□□□ -0.29
TRAFD1-208ENST00000552890 NARFQ9UHQ1 456 aa13.27□□□□□ -0.29
TRAFD1-208ENST00000552890 LRP5O75197 1615 aa13.27□□□□□ -0.29
TRAFD1-208ENST00000552890 COL5A3P25940 1745 aaPredicted RBP13.27□□□□□ -0.29
TRAFD1-208ENST00000552890 ZBTB7AO95365 584 aa13.26□□□□□ -0.29
TRAFD1-208ENST00000552890 CANXP27824 592 aaKnown RBP13.26□□□□□ -0.29
TRAFD1-208ENST00000552890 COL15A1P39059 1388 aa13.26□□□□□ -0.29
TRAFD1-208ENST00000552890 MIS18AQ9NYP9 233 aa13.26□□□□□ -0.29
TRAFD1-208ENST00000552890 UBR3Q6ZT12 1888 aa13.25□□□□□ -0.29
TRAFD1-208ENST00000552890 USP42Q9H9J4 1324 aaKnown RBP13.25□□□□□ -0.29
TRAFD1-208ENST00000552890 E9PSI1 815 aa13.25□□□□□ -0.29
TRAFD1-208ENST00000552890 CCDC30Q5VVM6 783 aa13.25□□□□□ -0.29
TRAFD1-208ENST00000552890 KIF6Q6ZMV9 814 aa13.25□□□□□ -0.29
TRAFD1-208ENST00000552890 MIER1Q8N108 512 aa13.25□□□□□ -0.29
TRAFD1-208ENST00000552890 ARXQ96QS3 562 aa13.25□□□□□ -0.29
TRAFD1-208ENST00000552890 MBIPQ9NS73 344 aa13.25□□□□□ -0.29
TRAFD1-208ENST00000552890 HYPKQ9NX55 129 aa13.25□□□□□ -0.29
TRAFD1-208ENST00000552890 DBF4Q9UBU7 674 aaPredicted RBP13.25□□□□□ -0.29
TRAFD1-208ENST00000552890 ZBTB1Q9Y2K1 713 aa13.25□□□□□ -0.29
TRAFD1-208ENST00000552890 USP16Q9Y5T5 823 aa13.25□□□□□ -0.29
TRAFD1-208ENST00000552890 KDM3BQ7LBC6 1761 aa13.25□□□□□ -0.29
TRAFD1-208ENST00000552890 CASZ1Q86V15 1759 aa13.25□□□□□ -0.29
TRAFD1-208ENST00000552890 ERVV-1B6SEH8 477 aa13.24□□□□□ -0.29
TRAFD1-208ENST00000552890 KCNQ3O43525 872 aa13.24□□□□□ -0.29
TRAFD1-208ENST00000552890 HDGFL1Q5TGJ6 251 aa13.24□□□□□ -0.29
TRAFD1-208ENST00000552890 ZNF428Q96B54 188 aa13.24□□□□□ -0.29
TRAFD1-208ENST00000552890 STK31Q9BXU1 1019 aa13.24□□□□□ -0.29
TRAFD1-208ENST00000552890 PDZRN3Q9UPQ7 1066 aa13.24□□□□□ -0.29
TRAFD1-208ENST00000552890 ATF5Q9Y2D1 282 aaPredicted RBP13.24□□□□□ -0.29
TRAFD1-208ENST00000552890 PARP3Q9Y6F1 533 aa13.24□□□□□ -0.29
TRAFD1-208ENST00000552890 TJP1Q07157 1748 aa13.24□□□□□ -0.29
TRAFD1-208ENST00000552890 DUSP27Q5VZP5 1158 aa13.23□□□□□ -0.29
TRAFD1-208ENST00000552890 DDX21Q9NR30 783 aaKnown RBP eCLIP13.23□□□□□ -0.29
TRAFD1-208ENST00000552890 CD2APQ9Y5K6 639 aa13.23□□□□□ -0.29
TRAFD1-208ENST00000552890 DDX58O95786 925 aaKnown RBP13.22□□□□□ -0.29
TRAFD1-208ENST00000552890 A1BGP04217 495 aa13.22□□□□□ -0.29
TRAFD1-208ENST00000552890 CT47B1P0C2W7 299 aaPredicted RBP13.22□□□□□ -0.29
TRAFD1-208ENST00000552890 HSP90AB3PQ58FF7 597 aa13.22□□□□□ -0.29
TRAFD1-208ENST00000552890 DZIP3Q86Y13 1208 aaKnown RBP13.22□□□□□ -0.29
TRAFD1-208ENST00000552890 ZNF330Q9Y3S2 320 aaPredicted RBP13.22□□□□□ -0.29
TRAFD1-208ENST00000552890 GYS1P13807 737 aa13.21□□□□□ -0.29
TRAFD1-208ENST00000552890 HSP90B1P14625 803 aaKnown RBP13.21□□□□□ -0.29
TRAFD1-208ENST00000552890 EIF2S2P20042 333 aaKnown RBP13.21□□□□□ -0.29
TRAFD1-208ENST00000552890 PTGER2P43116 358 aa13.21□□□□□ -0.29
TRAFD1-208ENST00000552890 SETDB2Q96T68 719 aa13.21□□□□□ -0.29
TRAFD1-208ENST00000552890 MYH14Q7Z406 1995 aaKnown RBP13.21□□□□□ -0.29
TRAFD1-208ENST00000552890 LAMB4A4D0S4 1761 aa13.2□□□□□ -0.3
TRAFD1-208ENST00000552890 SGIP1Q9BQI5 828 aa13.2□□□□□ -0.3
TRAFD1-208ENST00000552890 NPHP1O15259 732 aa13.19□□□□□ -0.3
TRAFD1-208ENST00000552890 MMP10P09238 476 aa13.19□□□□□ -0.3
TRAFD1-208ENST00000552890 TWISTNBQ3B726 338 aaPredicted RBP13.19□□□□□ -0.3
TRAFD1-208ENST00000552890 USPL1Q5W0Q7 1092 aa13.19□□□□□ -0.3
TRAFD1-208ENST00000552890 NYXQ9GZU5 481 aa13.19□□□□□ -0.3
TRAFD1-208ENST00000552890 SALL2Q9Y467 1007 aaPredicted RBP13.19□□□□□ -0.3
TRAFD1-208ENST00000552890 CARMIL3Q8ND23 1372 aa13.19□□□□□ -0.3
TRAFD1-208ENST00000552890 TGFB2P61812 414 aa13.18□□□□□ -0.3
TRAFD1-208ENST00000552890 TUBGCP6Q96RT7 1819 aa13.18□□□□□ -0.3
TRAFD1-208ENST00000552890 RNF123Q5XPI4 1314 aa13.17□□□□□ -0.3
TRAFD1-208ENST00000552890 MAP3K15Q6ZN16 1313 aa13.17□□□□□ -0.3
TRAFD1-208ENST00000552890 ZNF521Q96K83 1311 aa13.17□□□□□ -0.3
TRAFD1-208ENST00000552890 FANCIQ9NVI1 1328 aa13.17□□□□□ -0.3
TRAFD1-208ENST00000552890 CAMTA2O94983 1202 aa13.17□□□□□ -0.3
TRAFD1-208ENST00000552890 MYL6BP14649 208 aa13.17□□□□□ -0.3
TRAFD1-208ENST00000552890 PARP10Q53GL7 1025 aa13.17□□□□□ -0.3
TRAFD1-208ENST00000552890 TPTE2Q6XPS3 522 aa13.17□□□□□ -0.3
TRAFD1-208ENST00000552890 PDGFDQ9GZP0 370 aaPredicted RBP13.17□□□□□ -0.3
TRAFD1-208ENST00000552890 COL24A1Q17RW2 1714 aa13.16□□□□□ -0.3
TRAFD1-208ENST00000552890 NBPF26B4DH59 902 aa13.16□□□□□ -0.3
TRAFD1-208ENST00000552890 TM4SF1P30408 202 aa13.16□□□□□ -0.3
TRAFD1-208ENST00000552890 ST5P78524 1137 aa13.16□□□□□ -0.3
TRAFD1-208ENST00000552890 MSL1Q68DK7 614 aa13.16□□□□□ -0.3
TRAFD1-208ENST00000552890 NBPF10Q6P3W6 841 aaKnown RBP13.16□□□□□ -0.3
TRAFD1-208ENST00000552890 GIGYF2Q6Y7W6 1299 aaKnown RBP13.16□□□□□ -0.3
TRAFD1-208ENST00000552890 PPP1R42Q7Z4L9 355 aa13.16□□□□□ -0.3
TRAFD1-208ENST00000552890 NBPF15Q8N660 670 aa13.16□□□□□ -0.3
TRAFD1-208ENST00000552890 TBC1D2BQ9UPU7 963 aa13.16□□□□□ -0.3
TRAFD1-208ENST00000552890 PRAMEF22A3QJZ6 481 aa13.15□□□□□ -0.3
TRAFD1-208ENST00000552890 GTF2E1P29083 439 aaPredicted RBP13.15□□□□□ -0.3
TRAFD1-208ENST00000552890 HNRNPUQ00839 825 aaKnown RBP eCLIP13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms