RNA–Protein interactions for RNA: ENST00000551969.5

SP1-204, Transcript of Sp1 transcription factor, humanhuman

TSL 3

Gene SP1, Length 602 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP1-204ENST00000551969 PLEKHF1Q96S99 279 aa15.48■□□□□ 0.07
SP1-204ENST00000551969 RNF39Q9H2S5 420 aa15.48■□□□□ 0.07
SP1-204ENST00000551969 CEMIPQ8WUJ3 1361 aa15.48■□□□□ 0.07
SP1-204ENST00000551969 SMIM5Q71RC9 77 aa15.47■□□□□ 0.07
SP1-204ENST00000551969 RUNDC1Q96C34 613 aa15.47■□□□□ 0.07
SP1-204ENST00000551969 ZNF330Q9Y3S2 320 aaPredicted RBP15.47■□□□□ 0.07
SP1-204ENST00000551969 DCTN1Q14203 1278 aa15.46■□□□□ 0.07
SP1-204ENST00000551969 HEG1Q9ULI3 1381 aa15.46■□□□□ 0.07
SP1-204ENST00000551969 LY75O60449 1722 aa15.46■□□□□ 0.06
SP1-204ENST00000551969 GYS1P13807 737 aa15.45■□□□□ 0.06
SP1-204ENST00000551969 YY1P25490 414 aa15.45■□□□□ 0.06
SP1-204ENST00000551969 IL6STP40189 918 aaPredicted RBP15.45■□□□□ 0.06
SP1-204ENST00000551969 AMIGO3Q86WK7 504 aa15.45■□□□□ 0.06
SP1-204ENST00000551969 NARFQ9UHQ1 456 aa15.45■□□□□ 0.06
SP1-204ENST00000551969 TGFB2P61812 414 aa15.44■□□□□ 0.06
SP1-204ENST00000551969 NEUROD2Q15784 382 aa15.44■□□□□ 0.06
SP1-204ENST00000551969 BABAM1Q9NWV8 329 aa15.44■□□□□ 0.06
SP1-204ENST00000551969 USP42Q9H9J4 1324 aaKnown RBP15.43■□□□□ 0.06
SP1-204ENST00000551969 C4BP0C0L5 1744 aa15.43■□□□□ 0.06
SP1-204ENST00000551969 NPHP1O15259 732 aa15.43■□□□□ 0.06
SP1-204ENST00000551969 TMPOP42166 694 aaKnown RBP15.43■□□□□ 0.06
SP1-204ENST00000551969 CALD1Q05682 793 aaKnown RBP15.43■□□□□ 0.06
SP1-204ENST00000551969 USPL1Q5W0Q7 1092 aa15.43■□□□□ 0.06
SP1-204ENST00000551969 ADAMTS8Q9UP79 889 aa15.43■□□□□ 0.06
SP1-204ENST00000551969 ZBTB1Q9Y2K1 713 aa15.43■□□□□ 0.06
SP1-204ENST00000551969 CASZ1Q86V15 1759 aa15.43■□□□□ 0.06
SP1-204ENST00000551969 TOGARAM1Q9Y4F4 1720 aa15.43■□□□□ 0.06
SP1-204ENST00000551969 SOS1Q07889 1333 aaPredicted RBP15.43■□□□□ 0.06
SP1-204ENST00000551969 POLA2Q14181 598 aa15.42■□□□□ 0.06
SP1-204ENST00000551969 TSPYL4Q9UJ04 414 aa15.42■□□□□ 0.06
SP1-204ENST00000551969 FBXO3Q9UK99 471 aa15.42■□□□□ 0.06
SP1-204ENST00000551969 EIF5P55010 431 aaKnown RBP15.41■□□□□ 0.06
SP1-204ENST00000551969 CCDC146Q8IYE0 955 aa15.41■□□□□ 0.06
SP1-204ENST00000551969 MIS18AQ9NYP9 233 aa15.41■□□□□ 0.06
SP1-204ENST00000551969 SRP68Q9UHB9 627 aaKnown RBP15.41■□□□□ 0.06
SP1-204ENST00000551969 ZNF652Q9Y2D9 606 aa15.41■□□□□ 0.06
SP1-204ENST00000551969 ITGB4P16144 1822 aa15.4■□□□□ 0.06
SP1-204ENST00000551969 MRC1P22897 1456 aa15.4■□□□□ 0.06
SP1-204ENST00000551969 KCNQ3O43525 872 aa15.4■□□□□ 0.06
SP1-204ENST00000551969 NLGN2Q8NFZ4 835 aa15.4■□□□□ 0.06
SP1-204ENST00000551969 C5P01031 1676 aa15.4■□□□□ 0.06
SP1-204ENST00000551969 COL15A1P39059 1388 aa15.39■□□□□ 0.05
SP1-204ENST00000551969 CAPN15O75808 1086 aa15.39■□□□□ 0.05
SP1-204ENST00000551969 A1BGP04217 495 aa15.39■□□□□ 0.05
SP1-204ENST00000551969 CHMP4AQ9BY43 222 aa15.39■□□□□ 0.05
SP1-204ENST00000551969 USP16Q9Y5T5 823 aa15.39■□□□□ 0.05
SP1-204ENST00000551969 SETDB2Q96T68 719 aa15.38■□□□□ 0.05
SP1-204ENST00000551969 TBC1D2BQ9UPU7 963 aa15.38■□□□□ 0.05
SP1-204ENST00000551969 LAS1LQ9Y4W2 734 aaKnown RBP15.38■□□□□ 0.05
SP1-204ENST00000551969 TM4SF1P30408 202 aa15.37■□□□□ 0.05
SP1-204ENST00000551969 CLEC4GQ6UXB4 293 aa15.37■□□□□ 0.05
SP1-204ENST00000551969 DZIP3Q86Y13 1208 aaKnown RBP15.37■□□□□ 0.05
SP1-204ENST00000551969 PDZRN3Q9UPQ7 1066 aa15.37■□□□□ 0.05
SP1-204ENST00000551969 RRP7AQ9Y3A4 280 aaKnown RBP15.37■□□□□ 0.05
SP1-204ENST00000551969 GIGYF1O75420 1035 aaPredicted RBP15.36■□□□□ 0.05
SP1-204ENST00000551969 SERPINB2P05120 415 aa15.36■□□□□ 0.05
SP1-204ENST00000551969 EIF4A1P60842 406 aaKnown RBP15.36■□□□□ 0.05
SP1-204ENST00000551969 BICDL1Q6ZP65 573 aa15.36■□□□□ 0.05
SP1-204ENST00000551969 THUMPD2Q9BTF0 503 aaKnown RBP15.36■□□□□ 0.05
SP1-204ENST00000551969 MRS2Q9HD23 443 aa15.36■□□□□ 0.05
SP1-204ENST00000551969 PIM2Q9P1W9 311 aa15.36■□□□□ 0.05
SP1-204ENST00000551969 NFIXQ14938 502 aa15.35■□□□□ 0.05
SP1-204ENST00000551969 KIF6Q6ZMV9 814 aa15.35■□□□□ 0.05
SP1-204ENST00000551969 ZNF831Q5JPB2 1677 aa15.35■□□□□ 0.05
SP1-204ENST00000551969 QSER1Q2KHR3 1735 aa15.34■□□□□ 0.05
SP1-204ENST00000551969 A0A0G2JLW4 131 aa15.34■□□□□ 0.05
SP1-204ENST00000551969 POLRMTO00411 1230 aaKnown RBP15.34■□□□□ 0.05
SP1-204ENST00000551969 RGL2O15211 777 aa15.34■□□□□ 0.05
SP1-204ENST00000551969 GTF2E1P29083 439 aaPredicted RBP15.34■□□□□ 0.05
SP1-204ENST00000551969 BCS1LQ9Y276 419 aa15.34■□□□□ 0.05
SP1-204ENST00000551969 KCPQ6ZWJ8 1503 aa15.33■□□□□ 0.05
SP1-204ENST00000551969 H0YIN7 160 aa15.33■□□□□ 0.04
SP1-204ENST00000551969 APAF1O14727 1248 aa15.33■□□□□ 0.04
SP1-204ENST00000551969 PDE6BP35913 854 aa15.33■□□□□ 0.04
SP1-204ENST00000551969 ST5P78524 1137 aa15.33■□□□□ 0.04
SP1-204ENST00000551969 DALRD3Q5D0E6 543 aaKnown RBP15.33■□□□□ 0.04
SP1-204ENST00000551969 TPTE2Q6XPS3 522 aa15.33■□□□□ 0.04
SP1-204ENST00000551969 NGEFQ8N5V2 710 aa15.33■□□□□ 0.04
SP1-204ENST00000551969 SCN11AQ9UI33 1791 aa15.33■□□□□ 0.04
SP1-204ENST00000551969 DPEP1P16444 411 aa15.32■□□□□ 0.04
SP1-204ENST00000551969 EIF2S2P20042 333 aaKnown RBP15.32■□□□□ 0.04
SP1-204ENST00000551969 GNAI1P63096 354 aa15.32■□□□□ 0.04
SP1-204ENST00000551969 C1QBPQ07021 282 aaKnown RBP15.32■□□□□ 0.04
SP1-204ENST00000551969 CFAP44Q96MT7 982 aa15.32■□□□□ 0.04
SP1-204ENST00000551969 ERBB4Q15303 1308 aa15.32■□□□□ 0.04
SP1-204ENST00000551969 PRAMEF22A3QJZ6 481 aa15.31■□□□□ 0.04
SP1-204ENST00000551969 CHL1O00533 1208 aa15.31■□□□□ 0.04
SP1-204ENST00000551969 MYL6BP14649 208 aa15.31■□□□□ 0.04
SP1-204ENST00000551969 DDR1Q08345 913 aa15.31■□□□□ 0.04
SP1-204ENST00000551969 NBPF5PQ86XG9 351 aaPredicted RBP15.31■□□□□ 0.04
SP1-204ENST00000551969 ERVV-1B6SEH8 477 aa15.3■□□□□ 0.04
SP1-204ENST00000551969 YBX3P16989 372 aaKnown RBP eCLIP15.3■□□□□ 0.04
SP1-204ENST00000551969 TBC1D9BQ66K14 1250 aa15.3■□□□□ 0.04
SP1-204ENST00000551969 ARHGAP27Q6ZUM4 889 aa15.3■□□□□ 0.04
SP1-204ENST00000551969 CNBD1Q8NA66 436 aa15.3■□□□□ 0.04
SP1-204ENST00000551969 BRIP1Q9BX63 1249 aa15.3■□□□□ 0.04
SP1-204ENST00000551969 TRIM35Q9UPQ4 493 aa15.3■□□□□ 0.04
SP1-204ENST00000551969 CARMIL3Q8ND23 1372 aa15.29■□□□□ 0.04
SP1-204ENST00000551969 CAMTA2O94983 1202 aa15.29■□□□□ 0.04
SP1-204ENST00000551969 PIP4K2AP48426 406 aaPredicted RBP15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 95.3 ms