RNA–Protein interactions for RNA: ENST00000551901.5

RRN3P1-204, Transcript of RRN3 homolog, RNA polymerase I transcription factor pseudogene 1, humanhuman

BASIC

Gene RRN3P1, Length 1,157 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRN3P1-204ENST00000551901 RFC4P35249 363 aa13.8□□□□□ -0.2
RRN3P1-204ENST00000551901 NLGN1Q8N2Q7 840 aa13.8□□□□□ -0.2
RRN3P1-204ENST00000551901 NLGN2Q8NFZ4 835 aa13.8□□□□□ -0.2
RRN3P1-204ENST00000551901 CD2APQ9Y5K6 639 aa13.8□□□□□ -0.2
RRN3P1-204ENST00000551901 SOS1Q07889 1333 aaPredicted RBP13.8□□□□□ -0.2
RRN3P1-204ENST00000551901 NEFMP07197 916 aa13.79□□□□□ -0.2
RRN3P1-204ENST00000551901 FKBP8Q14318 412 aa13.79□□□□□ -0.2
RRN3P1-204ENST00000551901 TAF7Q15545 349 aaPredicted RBP13.79□□□□□ -0.2
RRN3P1-204ENST00000551901 FMNL2Q96PY5 1086 aa13.79□□□□□ -0.2
RRN3P1-204ENST00000551901 TEX13AQ9BXU3 409 aaPredicted RBP13.79□□□□□ -0.2
RRN3P1-204ENST00000551901 ZBTB1Q9Y2K1 713 aa13.79□□□□□ -0.2
RRN3P1-204ENST00000551901 USP42Q9H9J4 1324 aaKnown RBP13.79□□□□□ -0.2
RRN3P1-204ENST00000551901 STARD3NLO95772 234 aa13.78□□□□□ -0.2
RRN3P1-204ENST00000551901 SRP68Q9UHB9 627 aaKnown RBP13.78□□□□□ -0.2
RRN3P1-204ENST00000551901 MMP10P09238 476 aa13.77□□□□□ -0.21
RRN3P1-204ENST00000551901 EIF5P55010 431 aaKnown RBP13.77□□□□□ -0.21
RRN3P1-204ENST00000551901 KLHL34Q8N239 644 aa13.77□□□□□ -0.21
RRN3P1-204ENST00000551901 KIF13BQ9NQT8 1826 aa13.77□□□□□ -0.21
RRN3P1-204ENST00000551901 KDM3BQ7LBC6 1761 aa13.76□□□□□ -0.21
RRN3P1-204ENST00000551901 MAPK8IP3Q9UPT6 1336 aa13.76□□□□□ -0.21
RRN3P1-204ENST00000551901 DCAF8L1A6NGE4 600 aa13.76□□□□□ -0.21
RRN3P1-204ENST00000551901 TMPOP42166 694 aaKnown RBP13.76□□□□□ -0.21
RRN3P1-204ENST00000551901 NARFQ9UHQ1 456 aa13.76□□□□□ -0.21
RRN3P1-204ENST00000551901 ADAMTS8Q9UP79 889 aa13.76□□□□□ -0.21
RRN3P1-204ENST00000551901 USP16Q9Y5T5 823 aa13.76□□□□□ -0.21
RRN3P1-204ENST00000551901 COL15A1P39059 1388 aa13.75□□□□□ -0.21
RRN3P1-204ENST00000551901 PRAMEF22A3QJZ6 481 aa13.75□□□□□ -0.21
RRN3P1-204ENST00000551901 CANXP27824 592 aaKnown RBP13.75□□□□□ -0.21
RRN3P1-204ENST00000551901 TM4SF1P30408 202 aa13.75□□□□□ -0.21
RRN3P1-204ENST00000551901 RIPK4P57078 832 aa13.75□□□□□ -0.21
RRN3P1-204ENST00000551901 THUMPD2Q9BTF0 503 aaKnown RBP13.75□□□□□ -0.21
RRN3P1-204ENST00000551901 BCL2L12Q9HB09 334 aa13.75□□□□□ -0.21
RRN3P1-204ENST00000551901 MIS18AQ9NYP9 233 aa13.75□□□□□ -0.21
RRN3P1-204ENST00000551901 KIAA1551Q9HCM1 1747 aa13.74□□□□□ -0.21
RRN3P1-204ENST00000551901 A1BGP04217 495 aa13.74□□□□□ -0.21
RRN3P1-204ENST00000551901 SNRPA1P09661 255 aaKnown RBP13.74□□□□□ -0.21
RRN3P1-204ENST00000551901 IL6STP40189 918 aaPredicted RBP13.74□□□□□ -0.21
RRN3P1-204ENST00000551901 USPL1Q5W0Q7 1092 aa13.74□□□□□ -0.21
RRN3P1-204ENST00000551901 PNISRQ8TF01 805 aaKnown RBP13.74□□□□□ -0.21
RRN3P1-204ENST00000551901 RUNDC1Q96C34 613 aa13.74□□□□□ -0.21
RRN3P1-204ENST00000551901 ZPR1O75312 459 aa13.73□□□□□ -0.21
RRN3P1-204ENST00000551901 DDR1Q08345 913 aa13.73□□□□□ -0.21
RRN3P1-204ENST00000551901 WDR43Q15061 677 aaKnown RBP eCLIP13.73□□□□□ -0.21
RRN3P1-204ENST00000551901 CCDC146Q8IYE0 955 aa13.73□□□□□ -0.21
RRN3P1-204ENST00000551901 CHD4Q14839 1912 aa13.72□□□□□ -0.21
RRN3P1-204ENST00000551901 YBX3P16989 372 aaKnown RBP eCLIP13.72□□□□□ -0.21
RRN3P1-204ENST00000551901 EIF4A1P60842 406 aaKnown RBP13.72□□□□□ -0.21
RRN3P1-204ENST00000551901 CCDC184Q52MB2 194 aa13.72□□□□□ -0.21
RRN3P1-204ENST00000551901 C10orf71Q711Q0 1435 aa13.72□□□□□ -0.21
RRN3P1-204ENST00000551901 NRXN2Q9P2S2 1712 aa13.71□□□□□ -0.21
RRN3P1-204ENST00000551901 A0A087WZG4 1122 aa13.71□□□□□ -0.21
RRN3P1-204ENST00000551901 POLRMTO00411 1230 aaKnown RBP13.71□□□□□ -0.21
RRN3P1-204ENST00000551901 GIGYF1O75420 1035 aaPredicted RBP13.71□□□□□ -0.21
RRN3P1-204ENST00000551901 GPR162Q16538 588 aa13.71□□□□□ -0.21
RRN3P1-204ENST00000551901 BABAM1Q9NWV8 329 aa13.71□□□□□ -0.21
RRN3P1-204ENST00000551901 TRIM35Q9UPQ4 493 aa13.71□□□□□ -0.21
RRN3P1-204ENST00000551901 RRP7AQ9Y3A4 280 aaKnown RBP13.71□□□□□ -0.21
RRN3P1-204ENST00000551901 PARP3Q9Y6F1 533 aa13.71□□□□□ -0.21
RRN3P1-204ENST00000551901 AFDNP55196 1824 aaKnown RBP13.71□□□□□ -0.22
RRN3P1-204ENST00000551901 NBPF26B4DH59 902 aa13.7□□□□□ -0.22
RRN3P1-204ENST00000551901 TGFB2P61812 414 aa13.7□□□□□ -0.22
RRN3P1-204ENST00000551901 NFIXQ14938 502 aa13.7□□□□□ -0.22
RRN3P1-204ENST00000551901 NBPF10Q6P3W6 841 aaKnown RBP13.7□□□□□ -0.22
RRN3P1-204ENST00000551901 NBPF15Q8N660 670 aa13.7□□□□□ -0.22
RRN3P1-204ENST00000551901 LAMB4A4D0S4 1761 aa13.7□□□□□ -0.22
RRN3P1-204ENST00000551901 N4BP2Q86UW6 1770 aaPredicted RBP13.7□□□□□ -0.22
RRN3P1-204ENST00000551901 SCN7AQ01118 1682 aa13.69□□□□□ -0.22
RRN3P1-204ENST00000551901 PXDNLA1KZ92 1463 aa13.69□□□□□ -0.22
RRN3P1-204ENST00000551901 YY1P25490 414 aa13.69□□□□□ -0.22
RRN3P1-204ENST00000551901 LMOD3Q0VAK6 560 aa13.69□□□□□ -0.22
RRN3P1-204ENST00000551901 TBC1D2BQ9UPU7 963 aa13.69□□□□□ -0.22
RRN3P1-204ENST00000551901 BRCA1P38398 1863 aaKnown RBP13.68□□□□□ -0.22
RRN3P1-204ENST00000551901 UTRNP46939 3433 aa13.68□□□□□ -0.22
RRN3P1-204ENST00000551901 CAMTA2O94983 1202 aa13.68□□□□□ -0.22
RRN3P1-204ENST00000551901 KCNA3P22001 575 aa13.68□□□□□ -0.22
RRN3P1-204ENST00000551901 PIP4K2AP48426 406 aaPredicted RBP13.68□□□□□ -0.22
RRN3P1-204ENST00000551901 NEUROD2Q15784 382 aa13.68□□□□□ -0.22
RRN3P1-204ENST00000551901 BCORQ6W2J9 1755 aa13.68□□□□□ -0.22
RRN3P1-204ENST00000551901 CHL1O00533 1208 aa13.67□□□□□ -0.22
RRN3P1-204ENST00000551901 GRIN3BO60391 1043 aa13.67□□□□□ -0.22
RRN3P1-204ENST00000551901 A0A0G2JLW4 131 aa13.66□□□□□ -0.22
RRN3P1-204ENST00000551901 SERPINB2P05120 415 aa13.66□□□□□ -0.22
RRN3P1-204ENST00000551901 TBC1D9BQ66K14 1250 aa13.66□□□□□ -0.22
RRN3P1-204ENST00000551901 DZIP3Q86Y13 1208 aaKnown RBP13.66□□□□□ -0.22
RRN3P1-204ENST00000551901 PELP1Q8IZL8 1130 aaKnown RBP13.66□□□□□ -0.22
RRN3P1-204ENST00000551901 TSPYL4Q9UJ04 414 aa13.66□□□□□ -0.22
RRN3P1-204ENST00000551901 APAF1O14727 1248 aa13.65□□□□□ -0.22
RRN3P1-204ENST00000551901 RGL2O15211 777 aa13.65□□□□□ -0.22
RRN3P1-204ENST00000551901 DPEP1P16444 411 aa13.65□□□□□ -0.22
RRN3P1-204ENST00000551901 ZNF330Q9Y3S2 320 aaPredicted RBP13.65□□□□□ -0.22
RRN3P1-204ENST00000551901 ANP32CO43423 234 aa13.64□□□□□ -0.23
RRN3P1-204ENST00000551901 CLEC4GQ6UXB4 293 aa13.64□□□□□ -0.23
RRN3P1-204ENST00000551901 ZNF853P0CG23 659 aa13.63□□□□□ -0.23
RRN3P1-204ENST00000551901 PDIA6Q15084 440 aa13.63□□□□□ -0.23
RRN3P1-204ENST00000551901 BICDL1Q6ZP65 573 aa13.63□□□□□ -0.23
RRN3P1-204ENST00000551901 LRP10Q7Z4F1 713 aa13.63□□□□□ -0.23
RRN3P1-204ENST00000551901 NPM2Q86SE8 214 aaKnown RBP13.63□□□□□ -0.23
RRN3P1-204ENST00000551901 ERBB4Q15303 1308 aa13.63□□□□□ -0.23
RRN3P1-204ENST00000551901 ANKRD31Q8N7Z5 1873 aa13.62□□□□□ -0.23
RRN3P1-204ENST00000551901 CFAP44Q96MT7 982 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms