RNA–Protein interactions for RNA: ENST00000551787.5

BRF1-219, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 824 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-219ENST00000551787 COL24A1Q17RW2 1714 aa22.11■■□□□ 1.13
BRF1-219ENST00000551787 ADAMTS8Q9UP79 889 aa22.1■■□□□ 1.13
BRF1-219ENST00000551787 RRP7AQ9Y3A4 280 aaKnown RBP22.1■■□□□ 1.13
BRF1-219ENST00000551787 SOS1Q07889 1333 aaPredicted RBP22.09■■□□□ 1.13
BRF1-219ENST00000551787 RIPK4P57078 832 aa22.09■■□□□ 1.13
BRF1-219ENST00000551787 FKBP8Q14318 412 aa22.09■■□□□ 1.13
BRF1-219ENST00000551787 PRAMEF22A3QJZ6 481 aa22.08■■□□□ 1.13
BRF1-219ENST00000551787 A1BGP04217 495 aa22.08■■□□□ 1.13
BRF1-219ENST00000551787 NEUROD2Q15784 382 aa22.08■■□□□ 1.13
BRF1-219ENST00000551787 GPR162Q16538 588 aa22.08■■□□□ 1.13
BRF1-219ENST00000551787 CD2APQ9Y5K6 639 aa22.08■■□□□ 1.13
BRF1-219ENST00000551787 TEX13AQ9BXU3 409 aaPredicted RBP22.07■■□□□ 1.12
BRF1-219ENST00000551787 ZNF330Q9Y3S2 320 aaPredicted RBP22.07■■□□□ 1.12
BRF1-219ENST00000551787 SIPA1L3O60292 1781 aaPredicted RBP22.07■■□□□ 1.12
BRF1-219ENST00000551787 USP42Q9H9J4 1324 aaKnown RBP22.06■■□□□ 1.12
BRF1-219ENST00000551787 ZPR1O75312 459 aa22.06■■□□□ 1.12
BRF1-219ENST00000551787 TMPOP42166 694 aaKnown RBP22.06■■□□□ 1.12
BRF1-219ENST00000551787 USP16Q9Y5T5 823 aa22.06■■□□□ 1.12
BRF1-219ENST00000551787 PIP4K2AP48426 406 aaPredicted RBP22.05■■□□□ 1.12
BRF1-219ENST00000551787 CCDC184Q52MB2 194 aa22.05■■□□□ 1.12
BRF1-219ENST00000551787 USPL1Q5W0Q7 1092 aa22.05■■□□□ 1.12
BRF1-219ENST00000551787 WWC3Q9ULE0 1092 aa22.05■■□□□ 1.12
BRF1-219ENST00000551787 UBR2Q8IWV8 1755 aa22.04■■□□□ 1.12
BRF1-219ENST00000551787 SNRPA1P09661 255 aaKnown RBP22.04■■□□□ 1.12
BRF1-219ENST00000551787 COL15A1P39059 1388 aa22.03■■□□□ 1.12
BRF1-219ENST00000551787 EIF5P55010 431 aaKnown RBP22.03■■□□□ 1.12
BRF1-219ENST00000551787 RUNDC1Q96C34 613 aa22.03■■□□□ 1.12
BRF1-219ENST00000551787 NARFQ9UHQ1 456 aa22.03■■□□□ 1.12
BRF1-219ENST00000551787 PARP3Q9Y6F1 533 aa22.03■■□□□ 1.12
BRF1-219ENST00000551787 CICQ96RK0 1608 aaPredicted RBP22.02■■□□□ 1.12
BRF1-219ENST00000551787 DDR1Q08345 913 aa22.01■■□□□ 1.11
BRF1-219ENST00000551787 TBC1D2BQ9UPU7 963 aa22.01■■□□□ 1.11
BRF1-219ENST00000551787 DLG5Q8TDM6 1919 aa22■■□□□ 1.11
BRF1-219ENST00000551787 YBX3P16989 372 aaKnown RBP eCLIP22■■□□□ 1.11
BRF1-219ENST00000551787 YY1P25490 414 aa22■■□□□ 1.11
BRF1-219ENST00000551787 PNISRQ8TF01 805 aaKnown RBP22■■□□□ 1.11
BRF1-219ENST00000551787 BCL2L12Q9HB09 334 aa22■■□□□ 1.11
BRF1-219ENST00000551787 TM4SF1P30408 202 aa21.99■■□□□ 1.11
BRF1-219ENST00000551787 IL6STP40189 918 aaPredicted RBP21.99■■□□□ 1.11
BRF1-219ENST00000551787 C4AP0C0L4 1744 aa21.99■■□□□ 1.11
BRF1-219ENST00000551787 A0A087WZG4 1122 aa21.98■■□□□ 1.11
BRF1-219ENST00000551787 EIF4A1P60842 406 aaKnown RBP21.98■■□□□ 1.11
BRF1-219ENST00000551787 ANP32CO43423 234 aa21.97■■□□□ 1.11
BRF1-219ENST00000551787 NFIXQ14938 502 aa21.97■■□□□ 1.11
BRF1-219ENST00000551787 BICDL1Q6ZP65 573 aa21.97■■□□□ 1.11
BRF1-219ENST00000551787 NPM2Q86SE8 214 aaKnown RBP21.97■■□□□ 1.11
BRF1-219ENST00000551787 TSPYL4Q9UJ04 414 aa21.97■■□□□ 1.11
BRF1-219ENST00000551787 TRIM35Q9UPQ4 493 aa21.97■■□□□ 1.11
BRF1-219ENST00000551787 A0A0G2JLW4 131 aa21.96■■□□□ 1.11
BRF1-219ENST00000551787 LMOD3Q0VAK6 560 aa21.96■■□□□ 1.11
BRF1-219ENST00000551787 SENP3-EIF4A1A0A087X0R7 540 aa21.95■■□□□ 1.1
BRF1-219ENST00000551787 NBPF26B4DH59 902 aa21.95■■□□□ 1.1
BRF1-219ENST00000551787 POLRMTO00411 1230 aaKnown RBP21.95■■□□□ 1.1
BRF1-219ENST00000551787 APAF1O14727 1248 aa21.95■■□□□ 1.1
BRF1-219ENST00000551787 GIGYF1O75420 1035 aaPredicted RBP21.95■■□□□ 1.1
BRF1-219ENST00000551787 NBPF10Q6P3W6 841 aaKnown RBP21.95■■□□□ 1.1
BRF1-219ENST00000551787 NBPF15Q8N660 670 aa21.95■■□□□ 1.1
BRF1-219ENST00000551787 LAS1LQ9Y4W2 734 aaKnown RBP21.95■■□□□ 1.1
BRF1-219ENST00000551787 DPEP1P16444 411 aa21.93■■□□□ 1.1
BRF1-219ENST00000551787 TBC1D9BQ66K14 1250 aa21.92■■□□□ 1.1
BRF1-219ENST00000551787 DZIP3Q86Y13 1208 aaKnown RBP21.92■■□□□ 1.1
BRF1-219ENST00000551787 NGEFQ8N5V2 710 aa21.92■■□□□ 1.1
BRF1-219ENST00000551787 CAMTA2O94983 1202 aa21.91■■□□□ 1.1
BRF1-219ENST00000551787 SERPINB2P05120 415 aa21.91■■□□□ 1.1
BRF1-219ENST00000551787 TGFB2P61812 414 aa21.91■■□□□ 1.1
BRF1-219ENST00000551787 MRS2Q9HD23 443 aa21.91■■□□□ 1.1
BRF1-219ENST00000551787 C10orf71Q711Q0 1435 aa21.9■■□□□ 1.1
BRF1-219ENST00000551787 GRIN3BO60391 1043 aa21.9■■□□□ 1.1
BRF1-219ENST00000551787 PXDNLA1KZ92 1463 aa21.89■■□□□ 1.09
BRF1-219ENST00000551787 CHL1O00533 1208 aa21.88■■□□□ 1.09
BRF1-219ENST00000551787 EIF2S2P20042 333 aaKnown RBP21.88■■□□□ 1.09
BRF1-219ENST00000551787 CHRNA5P30532 468 aa21.88■■□□□ 1.09
BRF1-219ENST00000551787 CCDC24Q8N4L8 307 aa21.88■■□□□ 1.09
BRF1-219ENST00000551787 MYL6BP14649 208 aa21.87■■□□□ 1.09
BRF1-219ENST00000551787 KCNA3P22001 575 aa21.87■■□□□ 1.09
BRF1-219ENST00000551787 KRT24Q2M2I5 525 aa21.87■■□□□ 1.09
BRF1-219ENST00000551787 BABAM1Q9NWV8 329 aa21.87■■□□□ 1.09
BRF1-219ENST00000551787 BCS1LQ9Y276 419 aa21.87■■□□□ 1.09
BRF1-219ENST00000551787 KDM3BQ7LBC6 1761 aa21.87■■□□□ 1.09
BRF1-219ENST00000551787 NECTIN2Q92692 538 aa21.86■■□□□ 1.09
BRF1-219ENST00000551787 SETDB2Q96T68 719 aa21.85■■□□□ 1.09
BRF1-219ENST00000551787 TTLL7Q6ZT98 887 aa21.84■■□□□ 1.09
BRF1-219ENST00000551787 ANXA1P04083 346 aa21.83■■□□□ 1.09
BRF1-219ENST00000551787 HLFQ16534 295 aa21.83■■□□□ 1.09
BRF1-219ENST00000551787 PIM2Q9P1W9 311 aa21.83■■□□□ 1.09
BRF1-219ENST00000551787 N4BP2Q86UW6 1770 aaPredicted RBP21.82■■□□□ 1.08
BRF1-219ENST00000551787 NPHP1O15259 732 aa21.81■■□□□ 1.08
BRF1-219ENST00000551787 PROSER3Q2NL68 480 aa21.81■■□□□ 1.08
BRF1-219ENST00000551787 CFAP44Q96MT7 982 aa21.81■■□□□ 1.08
BRF1-219ENST00000551787 ZNF652Q9Y2D9 606 aa21.81■■□□□ 1.08
BRF1-219ENST00000551787 CARMIL3Q8ND23 1372 aa21.81■■□□□ 1.08
BRF1-219ENST00000551787 KIF13BQ9NQT8 1826 aa21.8■■□□□ 1.08
BRF1-219ENST00000551787 FAM177BA6PVY3 158 aa21.8■■□□□ 1.08
BRF1-219ENST00000551787 PDIA6Q15084 440 aa21.8■■□□□ 1.08
BRF1-219ENST00000551787 DALRD3Q5D0E6 543 aaKnown RBP21.8■■□□□ 1.08
BRF1-219ENST00000551787 PRR5LQ6MZQ0 368 aa21.8■■□□□ 1.08
BRF1-219ENST00000551787 CLEC4GQ6UXB4 293 aa21.8■■□□□ 1.08
BRF1-219ENST00000551787 C2CD5Q86YS7 1000 aa21.8■■□□□ 1.08
BRF1-219ENST00000551787 MBIPQ9NS73 344 aa21.8■■□□□ 1.08
BRF1-219ENST00000551787 NIP7Q9Y221 180 aaKnown RBP eCLIP21.8■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms