RNA–Protein interactions for RNA: ENST00000550620.1

PDE1B-207, Transcript of phosphodiesterase 1B, humanhuman

TSL 1 (best) BASIC

Gene PDE1B, Length 2,150 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1B-207ENST00000550620 NOLC1Q14978 699 aaKnown RBP eCLIP18.08■□□□□ 0.48
PDE1B-207ENST00000550620 SGSM2O43147 1006 aa18.07■□□□□ 0.48
PDE1B-207ENST00000550620 STX6O43752 255 aa18.07■□□□□ 0.48
PDE1B-207ENST00000550620 SSH3Q8TE77 659 aa18.07■□□□□ 0.48
PDE1B-207ENST00000550620 CNPY2Q9Y2B0 182 aa18.07■□□□□ 0.48
PDE1B-207ENST00000550620 SMAP1Q8IYB5 467 aaPredicted RBP18.07■□□□□ 0.48
PDE1B-207ENST00000550620 CNTROBQ8N137 903 aa18.07■□□□□ 0.48
PDE1B-207ENST00000550620 LIMCH1Q9UPQ0 1083 aa18.07■□□□□ 0.48
PDE1B-207ENST00000550620 XRN1Q8IZH2 1706 aaKnown RBP18.06■□□□□ 0.48
PDE1B-207ENST00000550620 TTC21AQ8NDW8 1320 aa18.06■□□□□ 0.48
PDE1B-207ENST00000550620 TTC14Q96N46 770 aa18.06■□□□□ 0.48
PDE1B-207ENST00000550620 SMC3Q9UQE7 1217 aa18.06■□□□□ 0.48
PDE1B-207ENST00000550620 SNX14Q9Y5W7 946 aa18.06■□□□□ 0.48
PDE1B-207ENST00000550620 TOPAZ1Q8N9V7 1692 aa18.06■□□□□ 0.48
PDE1B-207ENST00000550620 FAM208AQ9UK61 1670 aaKnown RBP18.06■□□□□ 0.48
PDE1B-207ENST00000550620 ROBO2Q9HCK4 1378 aa18.06■□□□□ 0.48
PDE1B-207ENST00000550620 IGSF1Q8N6C5 1336 aa18.06■□□□□ 0.48
PDE1B-207ENST00000550620 F13A1P00488 732 aa18.06■□□□□ 0.48
PDE1B-207ENST00000550620 IL1RAPL2Q9NP60 686 aa18.06■□□□□ 0.48
PDE1B-207ENST00000550620 BABAM1Q9NWV8 329 aa18.06■□□□□ 0.48
PDE1B-207ENST00000550620 KDM4AO75164 1064 aa18.05■□□□□ 0.48
PDE1B-207ENST00000550620 TPM3P06753 285 aa18.05■□□□□ 0.48
PDE1B-207ENST00000550620 HCLS1P14317 486 aaPredicted RBP18.05■□□□□ 0.48
PDE1B-207ENST00000550620 GTF2F1P35269 517 aaKnown RBP eCLIP18.05■□□□□ 0.48
PDE1B-207ENST00000550620 USP44Q9H0E7 712 aa18.05■□□□□ 0.48
PDE1B-207ENST00000550620 IL25Q9H293 177 aa18.05■□□□□ 0.48
PDE1B-207ENST00000550620 SOX12O15370 315 aa18.04■□□□□ 0.48
PDE1B-207ENST00000550620 SYT1P21579 422 aa18.04■□□□□ 0.48
PDE1B-207ENST00000550620 AK2P54819 239 aa18.04■□□□□ 0.48
PDE1B-207ENST00000550620 NUTM1Q86Y26 1132 aa18.04■□□□□ 0.48
PDE1B-207ENST00000550620 KIF1BPQ96EK5 621 aa18.04■□□□□ 0.48
PDE1B-207ENST00000550620 GNAT3A8MTJ3 354 aa18.04■□□□□ 0.48
PDE1B-207ENST00000550620 SURF6O75683 361 aaKnown RBP18.04■□□□□ 0.48
PDE1B-207ENST00000550620 PI4K2BQ8TCG2 481 aa18.04■□□□□ 0.48
PDE1B-207ENST00000550620 CCDC94Q9BW85 323 aaPredicted RBP18.04■□□□□ 0.48
PDE1B-207ENST00000550620 LSG1Q9H089 658 aaKnown RBP18.04■□□□□ 0.48
PDE1B-207ENST00000550620 SPTLC3Q9NUV7 552 aa18.04■□□□□ 0.48
PDE1B-207ENST00000550620 LRRC37A3O60309 1634 aa18.03■□□□□ 0.48
PDE1B-207ENST00000550620 POLA2Q14181 598 aa18.03■□□□□ 0.48
PDE1B-207ENST00000550620 RHPN1Q8TCX5 695 aa18.03■□□□□ 0.48
PDE1B-207ENST00000550620 AMPHP49418 695 aa18.03■□□□□ 0.48
PDE1B-207ENST00000550620 EYA1Q99502 592 aa18.03■□□□□ 0.48
PDE1B-207ENST00000550620 TTC12Q9H892 705 aaPredicted RBP18.03■□□□□ 0.48
PDE1B-207ENST00000550620 HSP90AB4PQ58FF6 505 aa18.02■□□□□ 0.48
PDE1B-207ENST00000550620 RUFY3Q7L099 469 aa18.02■□□□□ 0.48
PDE1B-207ENST00000550620 PPP1R42Q7Z4L9 355 aa18.02■□□□□ 0.48
PDE1B-207ENST00000550620 NECTIN2Q92692 538 aa18.02■□□□□ 0.48
PDE1B-207ENST00000550620 ZNF830Q96NB3 372 aaPredicted RBP18.02■□□□□ 0.48
PDE1B-207ENST00000550620 N4BP2Q86UW6 1770 aaPredicted RBP18.02■□□□□ 0.47
PDE1B-207ENST00000550620 FIBPO43427 364 aa18.01■□□□□ 0.47
PDE1B-207ENST00000550620 MAP3K5Q99683 1374 aa18.01■□□□□ 0.47
PDE1B-207ENST00000550620 ZSCAN31Q96LW9 406 aaPredicted RBP18.01■□□□□ 0.47
PDE1B-207ENST00000550620 FUCA2Q9BTY2 467 aa18.01■□□□□ 0.47
PDE1B-207ENST00000550620 FMN2Q9NZ56 1722 aa18.01■□□□□ 0.47
PDE1B-207ENST00000550620 GOLGA6L6A8MZA4 724 aa18■□□□□ 0.47
PDE1B-207ENST00000550620 MAP4K4O95819 1239 aaPredicted RBP18■□□□□ 0.47
PDE1B-207ENST00000550620 PDIA4P13667 645 aaKnown RBP18■□□□□ 0.47
PDE1B-207ENST00000550620 RUFY2Q8WXA3 655 aa18■□□□□ 0.47
PDE1B-207ENST00000550620 SH2B1Q9NRF2 756 aaPredicted RBP18■□□□□ 0.47
PDE1B-207ENST00000550620 CEP170BQ9Y4F5 1589 aaPredicted RBP18■□□□□ 0.47
PDE1B-207ENST00000550620 MLECQ14165 292 aa18■□□□□ 0.47
PDE1B-207ENST00000550620 TAF7Q15545 349 aaPredicted RBP18■□□□□ 0.47
PDE1B-207ENST00000550620 ESF1Q9H501 851 aaKnown RBP18■□□□□ 0.47
PDE1B-207ENST00000550620 KIF3AQ9Y496 699 aa18■□□□□ 0.47
PDE1B-207ENST00000550620 RIMS1Q86UR5 1692 aaKnown RBP18■□□□□ 0.47
PDE1B-207ENST00000550620 TTC41PQ6P2S7 1318 aa17.99■□□□□ 0.47
PDE1B-207ENST00000550620 NUTM2FA1L443 756 aa17.98■□□□□ 0.47
PDE1B-207ENST00000550620 SRGAP3O43295 1099 aa17.98■□□□□ 0.47
PDE1B-207ENST00000550620 CASTP20810 708 aaKnown RBP17.98■□□□□ 0.47
PDE1B-207ENST00000550620 CHAF1AQ13111 956 aaPredicted RBP17.98■□□□□ 0.47
PDE1B-207ENST00000550620 HDGFL1Q5TGJ6 251 aa17.98■□□□□ 0.47
PDE1B-207ENST00000550620 VPS53Q5VIR6 699 aa17.98■□□□□ 0.47
PDE1B-207ENST00000550620 RASEFQ8IZ41 740 aa17.98■□□□□ 0.47
PDE1B-207ENST00000550620 DIAPH3Q9NSV4 1193 aa17.98■□□□□ 0.47
PDE1B-207ENST00000550620 PRDM4Q9UKN5 801 aa17.98■□□□□ 0.47
PDE1B-207ENST00000550620 USP42Q9H9J4 1324 aaKnown RBP17.98■□□□□ 0.47
PDE1B-207ENST00000550620 PTPRUQ92729 1446 aa17.98■□□□□ 0.47
PDE1B-207ENST00000550620 GLRX3O76003 335 aaKnown RBP17.98■□□□□ 0.47
PDE1B-207ENST00000550620 GJB2P29033 226 aa17.98■□□□□ 0.47
PDE1B-207ENST00000550620 CWC27Q6UX04 472 aaKnown RBP17.98■□□□□ 0.47
PDE1B-207ENST00000550620 MPNDQ8N594 471 aa17.98■□□□□ 0.47
PDE1B-207ENST00000550620 CHMP4AQ9BY43 222 aa17.98■□□□□ 0.47
PDE1B-207ENST00000550620 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.98■□□□□ 0.47
PDE1B-207ENST00000550620 TMEM2Q9UHN6 1383 aa17.98■□□□□ 0.47
PDE1B-207ENST00000550620 CCDC192P0DO97 292 aa17.97■□□□□ 0.47
PDE1B-207ENST00000550620 PLCB2Q00722 1185 aa17.97■□□□□ 0.47
PDE1B-207ENST00000550620 GIMAP6Q6P9H5 292 aa17.97■□□□□ 0.47
PDE1B-207ENST00000550620 TM6SF1Q9BZW5 370 aa17.97■□□□□ 0.47
PDE1B-207ENST00000550620 HYPKQ9NX55 129 aa17.97■□□□□ 0.47
PDE1B-207ENST00000550620 ARID3AQ99856 593 aa17.97■□□□□ 0.47
PDE1B-207ENST00000550620 PDRG1Q9NUG6 133 aa17.97■□□□□ 0.47
PDE1B-207ENST00000550620 ZBTB7CA1YPR0 619 aa17.96■□□□□ 0.47
PDE1B-207ENST00000550620 TPRNQ4KMQ1 711 aa17.96■□□□□ 0.47
PDE1B-207ENST00000550620 CCDC83Q8IWF9 413 aa17.96■□□□□ 0.47
PDE1B-207ENST00000550620 MTMR6Q9Y217 621 aa17.96■□□□□ 0.47
PDE1B-207ENST00000550620 ADAMTS13Q76LX8 1427 aa17.96■□□□□ 0.47
PDE1B-207ENST00000550620 DNM1Q05193 864 aaKnown RBP17.96■□□□□ 0.46
PDE1B-207ENST00000550620 CYP46A1Q9Y6A2 500 aa17.96■□□□□ 0.46
PDE1B-207ENST00000550620 KIAA1524Q8TCG1 905 aa17.95■□□□□ 0.46
PDE1B-207ENST00000550620 SPG7Q9UQ90 795 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms