RNA–Protein interactions for RNA: ENST00000550483.5

CACNB3-217, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 730 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-217ENST00000550483 FLIIQ13045 1269 aa15.88■□□□□ 0.13
CACNB3-217ENST00000550483 ERBB4Q15303 1308 aa15.88■□□□□ 0.13
CACNB3-217ENST00000550483 EXOC5O00471 708 aa15.87■□□□□ 0.13
CACNB3-217ENST00000550483 HDAC1Q13547 482 aaPredicted RBP15.87■□□□□ 0.13
CACNB3-217ENST00000550483 NFATC2IPQ8NCF5 419 aa15.87■□□□□ 0.13
CACNB3-217ENST00000550483 TNNQ9UQP3 1299 aa15.87■□□□□ 0.13
CACNB3-217ENST00000550483 SHANK3Q9BYB0 1731 aa15.87■□□□□ 0.13
CACNB3-217ENST00000550483 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.87■□□□□ 0.13
CACNB3-217ENST00000550483 SPATA31A5Q5VU36 1347 aa15.87■□□□□ 0.13
CACNB3-217ENST00000550483 SPATA31A7Q8IWB4 1347 aa15.87■□□□□ 0.13
CACNB3-217ENST00000550483 ZBTB7BO15156 539 aaPredicted RBP15.86■□□□□ 0.13
CACNB3-217ENST00000550483 SNRPA1P09661 255 aaKnown RBP15.86■□□□□ 0.13
CACNB3-217ENST00000550483 EZH2Q15910 746 aaKnown RBP15.86■□□□□ 0.13
CACNB3-217ENST00000550483 HYPKQ9NX55 129 aa15.86■□□□□ 0.13
CACNB3-217ENST00000550483 TCERG1O14776 1098 aaKnown RBP15.85■□□□□ 0.13
CACNB3-217ENST00000550483 FKBP5Q13451 457 aaPredicted RBP15.85■□□□□ 0.13
CACNB3-217ENST00000550483 PAPPAQ13219 1627 aa15.84■□□□□ 0.13
CACNB3-217ENST00000550483 DDX54Q8TDD1 881 aaKnown RBP15.84■□□□□ 0.13
CACNB3-217ENST00000550483 USP35Q9P2H5 1018 aa15.84■□□□□ 0.13
CACNB3-217ENST00000550483 IBTKQ9P2D0 1353 aaPredicted RBP15.84■□□□□ 0.13
CACNB3-217ENST00000550483 KCNQ3O43525 872 aa15.83■□□□□ 0.12
CACNB3-217ENST00000550483 DDX58O95786 925 aaKnown RBP15.83■□□□□ 0.12
CACNB3-217ENST00000550483 DDX21Q9NR30 783 aaKnown RBP eCLIP15.83■□□□□ 0.12
CACNB3-217ENST00000550483 TMOD3Q9NYL9 352 aa15.83■□□□□ 0.12
CACNB3-217ENST00000550483 N4BP2Q86UW6 1770 aaPredicted RBP15.82■□□□□ 0.12
CACNB3-217ENST00000550483 EIF2S2P20042 333 aaKnown RBP15.82■□□□□ 0.12
CACNB3-217ENST00000550483 VSIG10Q8N0Z9 540 aa15.82■□□□□ 0.12
CACNB3-217ENST00000550483 TEX13AQ9BXU3 409 aaPredicted RBP15.82■□□□□ 0.12
CACNB3-217ENST00000550483 HDAC5Q9UQL6 1122 aa15.82■□□□□ 0.12
CACNB3-217ENST00000550483 PCDHB15Q9Y5E8 787 aa15.82■□□□□ 0.12
CACNB3-217ENST00000550483 ATP10DQ9P241 1426 aa15.82■□□□□ 0.12
CACNB3-217ENST00000550483 GNAI3P08754 354 aa15.81■□□□□ 0.12
CACNB3-217ENST00000550483 DDB1Q16531 1140 aa15.81■□□□□ 0.12
CACNB3-217ENST00000550483 ZNF496Q96IT1 587 aaPredicted RBP15.81■□□□□ 0.12
CACNB3-217ENST00000550483 CHPF2Q9P2E5 772 aa15.81■□□□□ 0.12
CACNB3-217ENST00000550483 LAMB4A4D0S4 1761 aa15.8■□□□□ 0.12
CACNB3-217ENST00000550483 UBR2Q8IWV8 1755 aa15.8■□□□□ 0.12
CACNB3-217ENST00000550483 G2E3Q7L622 706 aa15.8■□□□□ 0.12
CACNB3-217ENST00000550483 RPAP2Q8IXW5 612 aaPredicted RBP15.8■□□□□ 0.12
CACNB3-217ENST00000550483 SLC39A6Q13433 755 aa15.79■□□□□ 0.12
CACNB3-217ENST00000550483 GCC1Q96CN9 775 aa15.79■□□□□ 0.12
CACNB3-217ENST00000550483 CAMKK2Q96RR4 588 aa15.79■□□□□ 0.12
CACNB3-217ENST00000550483 TRIM37O94972 964 aa15.78■□□□□ 0.12
CACNB3-217ENST00000550483 IGHDP01880 384 aa15.78■□□□□ 0.12
CACNB3-217ENST00000550483 DNAAF4Q8WXU2 420 aa15.78■□□□□ 0.12
CACNB3-217ENST00000550483 KCPQ6ZWJ8 1503 aa15.78■□□□□ 0.12
CACNB3-217ENST00000550483 BCL9O00512 1426 aa15.77■□□□□ 0.12
CACNB3-217ENST00000550483 HMMRO75330 724 aa15.77■□□□□ 0.12
CACNB3-217ENST00000550483 ALDH1L1O75891 902 aa15.77■□□□□ 0.12
CACNB3-217ENST00000550483 SLC4A10Q6U841 1118 aa15.77■□□□□ 0.12
CACNB3-217ENST00000550483 KSR2Q6VAB6 950 aa15.77■□□□□ 0.12
CACNB3-217ENST00000550483 SMC5Q8IY18 1101 aa15.77■□□□□ 0.12
CACNB3-217ENST00000550483 NECTIN2Q92692 538 aa15.77■□□□□ 0.12
CACNB3-217ENST00000550483 SRCIN1Q9C0H9 1055 aa15.77■□□□□ 0.12
CACNB3-217ENST00000550483 TOGARAM1Q9Y4F4 1720 aa15.77■□□□□ 0.11
CACNB3-217ENST00000550483 APBA3O96018 575 aa15.75■□□□□ 0.11
CACNB3-217ENST00000550483 GNAI2P04899 355 aa15.75■□□□□ 0.11
CACNB3-217ENST00000550483 PHAXQ9H814 394 aaKnown RBP15.75■□□□□ 0.11
CACNB3-217ENST00000550483 C5P01031 1676 aa15.75■□□□□ 0.11
CACNB3-217ENST00000550483 F6X3S4 739 aa15.74■□□□□ 0.11
CACNB3-217ENST00000550483 ANKRD44Q8N8A2 993 aa15.74■□□□□ 0.11
CACNB3-217ENST00000550483 PI4KAP2A4QPH2 592 aa15.73■□□□□ 0.11
CACNB3-217ENST00000550483 NEXNQ0ZGT2 675 aa15.73■□□□□ 0.11
CACNB3-217ENST00000550483 PDIA6Q15084 440 aa15.73■□□□□ 0.11
CACNB3-217ENST00000550483 PI4KAP1Q8N8J0 262 aa15.73■□□□□ 0.11
CACNB3-217ENST00000550483 LINS1Q8NG48 757 aa15.73■□□□□ 0.11
CACNB3-217ENST00000550483 PIGBQ92521 554 aa15.73■□□□□ 0.11
CACNB3-217ENST00000550483 ADCY9O60503 1353 aa15.73■□□□□ 0.11
CACNB3-217ENST00000550483 STARD3NLO95772 234 aa15.72■□□□□ 0.11
CACNB3-217ENST00000550483 UBTFL1P0CB47 393 aaPredicted RBP15.72■□□□□ 0.11
CACNB3-217ENST00000550483 BEND3Q5T5X7 828 aa15.72■□□□□ 0.11
CACNB3-217ENST00000550483 MEIS3Q99687 375 aa15.72■□□□□ 0.11
CACNB3-217ENST00000550483 SMARCC1Q92922 1105 aaPredicted RBP15.71■□□□□ 0.11
CACNB3-217ENST00000550483 TSHZ2Q9NRE2 1034 aa15.71■□□□□ 0.11
CACNB3-217ENST00000550483 USP16Q9Y5T5 823 aa15.71■□□□□ 0.11
CACNB3-217ENST00000550483 PRAMEF22A3QJZ6 481 aa15.7■□□□□ 0.1
CACNB3-217ENST00000550483 CEP85Q6P2H3 762 aa15.7■□□□□ 0.1
CACNB3-217ENST00000550483 RIC3Q7Z5B4 369 aa15.7■□□□□ 0.1
CACNB3-217ENST00000550483 ATG3Q9NT62 314 aa15.7■□□□□ 0.1
CACNB3-217ENST00000550483 ZBTB47Q9UFB7 747 aaPredicted RBP15.7■□□□□ 0.1
CACNB3-217ENST00000550483 MAP3K2Q9Y2U5 619 aa15.7■□□□□ 0.1
CACNB3-217ENST00000550483 THSD7AQ9UPZ6 1657 aa15.7■□□□□ 0.1
CACNB3-217ENST00000550483 CICQ96RK0 1608 aaPredicted RBP15.69■□□□□ 0.1
CACNB3-217ENST00000550483 DOT1LQ8TEK3 1739 aa15.69■□□□□ 0.1
CACNB3-217ENST00000550483 ITGB4P16144 1822 aa15.69■□□□□ 0.1
CACNB3-217ENST00000550483 PROSER3Q2NL68 480 aa15.69■□□□□ 0.1
CACNB3-217ENST00000550483 ANKRD13DQ6ZTN6 518 aa15.69■□□□□ 0.1
CACNB3-217ENST00000550483 LRP10Q7Z4F1 713 aa15.69■□□□□ 0.1
CACNB3-217ENST00000550483 MARCH10Q8NA82 808 aaPredicted RBP15.69■□□□□ 0.1
CACNB3-217ENST00000550483 PLBD2Q8NHP8 589 aa15.69■□□□□ 0.1
CACNB3-217ENST00000550483 PPP1R1BQ9UD71 204 aaPredicted RBP15.69■□□□□ 0.1
CACNB3-217ENST00000550483 PDZRN3Q9UPQ7 1066 aa15.69■□□□□ 0.1
CACNB3-217ENST00000550483 NUCB1Q02818 461 aa15.68■□□□□ 0.1
CACNB3-217ENST00000550483 FAM196AQ6ZSG2 479 aa15.68■□□□□ 0.1
CACNB3-217ENST00000550483 COPS6Q7L5N1 327 aa15.68■□□□□ 0.1
CACNB3-217ENST00000550483 XAGE3Q8WTP9 111 aa15.68■□□□□ 0.1
CACNB3-217ENST00000550483 METTL22Q9BUU2 404 aaPredicted RBP15.68■□□□□ 0.1
CACNB3-217ENST00000550483 DCTPP1Q9H773 170 aa15.68■□□□□ 0.1
CACNB3-217ENST00000550483 UTRNP46939 3433 aa15.68■□□□□ 0.1
CACNB3-217ENST00000550483 UTYO14607 1347 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms