RNA–Protein interactions for RNA: ENST00000549559.2

SYT1-207, Transcript of synaptotagmin 1, humanhuman

TSL 4

Gene SYT1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYT1-207ENST00000549559 ZBED9Q6R2W3 1325 aa16.08■□□□□ 0.16
SYT1-207ENST00000549559 NUP188Q5SRE5 1749 aa16.08■□□□□ 0.16
SYT1-207ENST00000549559 SLC4A9Q96Q91 983 aa16.07■□□□□ 0.16
SYT1-207ENST00000549559 LRRC4BQ9NT99 713 aa16.07■□□□□ 0.16
SYT1-207ENST00000549559 C5P01031 1676 aa16.07■□□□□ 0.16
SYT1-207ENST00000549559 TJP1Q07157 1748 aa16.07■□□□□ 0.16
SYT1-207ENST00000549559 TAF1LQ8IZX4 1826 aa16.06■□□□□ 0.16
SYT1-207ENST00000549559 E9PSI1 815 aa16.06■□□□□ 0.16
SYT1-207ENST00000549559 SNRPA1P09661 255 aaKnown RBP16.06■□□□□ 0.16
SYT1-207ENST00000549559 TEX13AQ9BXU3 409 aaPredicted RBP16.06■□□□□ 0.16
SYT1-207ENST00000549559 FANCIQ9NVI1 1328 aa16.05■□□□□ 0.16
SYT1-207ENST00000549559 KCNQ4P56696 695 aa16.05■□□□□ 0.16
SYT1-207ENST00000549559 ITPK1Q13572 414 aa16.05■□□□□ 0.16
SYT1-207ENST00000549559 REM2Q8IYK8 340 aaPredicted RBP16.05■□□□□ 0.16
SYT1-207ENST00000549559 TSR2Q969E8 191 aaKnown RBP16.05■□□□□ 0.16
SYT1-207ENST00000549559 COL5A3P25940 1745 aaPredicted RBP16.05■□□□□ 0.16
SYT1-207ENST00000549559 DNAJC10Q8IXB1 793 aa16.04■□□□□ 0.16
SYT1-207ENST00000549559 LAMB4A4D0S4 1761 aa16.04■□□□□ 0.16
SYT1-207ENST00000549559 C4BP0C0L5 1744 aa16.03■□□□□ 0.16
SYT1-207ENST00000549559 GIGYF1O75420 1035 aaPredicted RBP16.03■□□□□ 0.16
SYT1-207ENST00000549559 STARD3NLO95772 234 aa16.03■□□□□ 0.16
SYT1-207ENST00000549559 HOXB7P09629 217 aa16.03■□□□□ 0.16
SYT1-207ENST00000549559 SLFN5Q08AF3 891 aa16.03■□□□□ 0.16
SYT1-207ENST00000549559 LINC00116Q8NCU8 138 aa16.03■□□□□ 0.16
SYT1-207ENST00000549559 SOS1Q07889 1333 aaPredicted RBP16.02■□□□□ 0.16
SYT1-207ENST00000549559 CNTNAP4Q9C0A0 1308 aa16.02■□□□□ 0.16
SYT1-207ENST00000549559 NBPF14Q5TI25 921 aa16.02■□□□□ 0.16
SYT1-207ENST00000549559 CYP19A1P11511 503 aaPredicted RBP16.01■□□□□ 0.15
SYT1-207ENST00000549559 RC3H1Q5TC82 1133 aaKnown RBP16.01■□□□□ 0.15
SYT1-207ENST00000549559 CDCA7LQ96GN5 454 aa16.01■□□□□ 0.15
SYT1-207ENST00000549559 AK7Q96M32 723 aa16.01■□□□□ 0.15
SYT1-207ENST00000549559 STK32BQ9NY57 414 aa16.01■□□□□ 0.15
SYT1-207ENST00000549559 PRAMEF22A3QJZ6 481 aa16■□□□□ 0.15
SYT1-207ENST00000549559 CRKLP46109 303 aaKnown RBP16■□□□□ 0.15
SYT1-207ENST00000549559 KRT24Q2M2I5 525 aa16■□□□□ 0.15
SYT1-207ENST00000549559 DUSP27Q5VZP5 1158 aa16■□□□□ 0.15
SYT1-207ENST00000549559 CHMP4AQ9BY43 222 aa16■□□□□ 0.15
SYT1-207ENST00000549559 CCDC87Q9NVE4 849 aa16■□□□□ 0.15
SYT1-207ENST00000549559 TRMT2AQ8IZ69 625 aaKnown RBP15.99■□□□□ 0.15
SYT1-207ENST00000549559 C8orf58Q8NAV2 365 aa15.99■□□□□ 0.15
SYT1-207ENST00000549559 YTHDC1Q96MU7 727 aaKnown RBP15.99■□□□□ 0.15
SYT1-207ENST00000549559 ANO8Q9HCE9 1232 aaPredicted RBP15.99■□□□□ 0.15
SYT1-207ENST00000549559 USP16Q9Y5T5 823 aa15.99■□□□□ 0.15
SYT1-207ENST00000549559 GNPATO15228 680 aa15.98■□□□□ 0.15
SYT1-207ENST00000549559 EXOSC9Q06265 439 aaKnown RBP15.98■□□□□ 0.15
SYT1-207ENST00000549559 SLC15A2Q16348 729 aa15.98■□□□□ 0.15
SYT1-207ENST00000549559 ZNF827Q17R98 1081 aa15.98■□□□□ 0.15
SYT1-207ENST00000549559 TWISTNBQ3B726 338 aaPredicted RBP15.98■□□□□ 0.15
SYT1-207ENST00000549559 MYH14Q7Z406 1995 aaKnown RBP15.98■□□□□ 0.15
SYT1-207ENST00000549559 ERBB4Q15303 1308 aa15.97■□□□□ 0.15
SYT1-207ENST00000549559 ELL2O00472 640 aaPredicted RBP15.97■□□□□ 0.15
SYT1-207ENST00000549559 HDGFL1Q5TGJ6 251 aa15.97■□□□□ 0.15
SYT1-207ENST00000549559 UBR3Q6ZT12 1888 aa15.97■□□□□ 0.15
SYT1-207ENST00000549559 QSER1Q2KHR3 1735 aa15.97■□□□□ 0.15
SYT1-207ENST00000549559 EIF2S2P20042 333 aaKnown RBP15.96■□□□□ 0.15
SYT1-207ENST00000549559 MKRN4PQ13434 485 aaPredicted RBP15.96■□□□□ 0.15
SYT1-207ENST00000549559 INTS5Q6P9B9 1019 aaKnown RBP15.96■□□□□ 0.15
SYT1-207ENST00000549559 TSPYL6Q8N831 410 aa15.96■□□□□ 0.15
SYT1-207ENST00000549559 TFCP2L1Q9NZI6 479 aa15.96■□□□□ 0.15
SYT1-207ENST00000549559 ZBTB1Q9Y2K1 713 aa15.96■□□□□ 0.15
SYT1-207ENST00000549559 TUBGCP6Q96RT7 1819 aa15.96■□□□□ 0.14
SYT1-207ENST00000549559 RPS6KA4O75676 772 aa15.95■□□□□ 0.14
SYT1-207ENST00000549559 A1BGP04217 495 aa15.95■□□□□ 0.14
SYT1-207ENST00000549559 SSFA2P28290 1259 aa15.95■□□□□ 0.14
SYT1-207ENST00000549559 RTCBQ9Y3I0 505 aaKnown RBP15.95■□□□□ 0.14
SYT1-207ENST00000549559 CANXP27824 592 aaKnown RBP15.94■□□□□ 0.14
SYT1-207ENST00000549559 CCDC30Q5VVM6 783 aa15.94■□□□□ 0.14
SYT1-207ENST00000549559 FLAD1Q8NFF5 587 aa15.94■□□□□ 0.14
SYT1-207ENST00000549559 VAMP4O75379 141 aa15.93■□□□□ 0.14
SYT1-207ENST00000549559 CT47B1P0C2W7 299 aaPredicted RBP15.93■□□□□ 0.14
SYT1-207ENST00000549559 IL6STP40189 918 aaPredicted RBP15.93■□□□□ 0.14
SYT1-207ENST00000549559 NPM2Q86SE8 214 aaKnown RBP15.93■□□□□ 0.14
SYT1-207ENST00000549559 NECTIN2Q92692 538 aa15.93■□□□□ 0.14
SYT1-207ENST00000549559 COL15A1P39059 1388 aa15.92■□□□□ 0.14
SYT1-207ENST00000549559 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.92■□□□□ 0.14
SYT1-207ENST00000549559 NBPF26B4DH59 902 aa15.92■□□□□ 0.14
SYT1-207ENST00000549559 PHF14O94880 888 aa15.92■□□□□ 0.14
SYT1-207ENST00000549559 EIF5P55010 431 aaKnown RBP15.92■□□□□ 0.14
SYT1-207ENST00000549559 NBPF10Q6P3W6 841 aaKnown RBP15.92■□□□□ 0.14
SYT1-207ENST00000549559 NBPF15Q8N660 670 aa15.92■□□□□ 0.14
SYT1-207ENST00000549559 ZNF428Q96B54 188 aa15.92■□□□□ 0.14
SYT1-207ENST00000549559 STK31Q9BXU1 1019 aa15.92■□□□□ 0.14
SYT1-207ENST00000549559 DDX21Q9NR30 783 aaKnown RBP eCLIP15.92■□□□□ 0.14
SYT1-207ENST00000549559 DBF4Q9UBU7 674 aaPredicted RBP15.92■□□□□ 0.14
SYT1-207ENST00000549559 PNPLA7Q6ZV29 1317 aa15.92■□□□□ 0.14
SYT1-207ENST00000549559 A0A087WZG4 1122 aa15.91■□□□□ 0.14
SYT1-207ENST00000549559 PIP4K2AP48426 406 aaPredicted RBP15.91■□□□□ 0.14
SYT1-207ENST00000549559 R3HDM1Q15032 1099 aaKnown RBP15.91■□□□□ 0.14
SYT1-207ENST00000549559 CHPF2Q9P2E5 772 aa15.91■□□□□ 0.14
SYT1-207ENST00000549559 ZNF330Q9Y3S2 320 aaPredicted RBP15.91■□□□□ 0.14
SYT1-207ENST00000549559 MYL6BP14649 208 aa15.9■□□□□ 0.14
SYT1-207ENST00000549559 PDIA6Q15084 440 aa15.9■□□□□ 0.14
SYT1-207ENST00000549559 TRAPPC3LQ5T215 181 aa15.9■□□□□ 0.14
SYT1-207ENST00000549559 AMIGO3Q86WK7 504 aa15.9■□□□□ 0.14
SYT1-207ENST00000549559 CACNA1FO60840 1977 aa15.89■□□□□ 0.13
SYT1-207ENST00000549559 C4AP0C0L4 1744 aa15.89■□□□□ 0.13
SYT1-207ENST00000549559 PROSER3Q2NL68 480 aa15.89■□□□□ 0.13
SYT1-207ENST00000549559 HYPKQ9NX55 129 aa15.89■□□□□ 0.13
SYT1-207ENST00000549559 PSDA5PKW4 1024 aaPredicted RBP15.88■□□□□ 0.13
SYT1-207ENST00000549559 RFC4P35249 363 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms