RNA–Protein interactions for RNA: ENST00000549549.1

PRIM1-204, Transcript of DNA primase subunit 1, humanhuman

TSL 3

Gene PRIM1, Length 456 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1-204ENST00000549549 ABTB2Q8N961 1025 aa14.11□□□□□ -0.15
PRIM1-204ENST00000549549 TMC1Q8TDI8 760 aa14.11□□□□□ -0.15
PRIM1-204ENST00000549549 IL2RAP01589 272 aa14.1□□□□□ -0.15
PRIM1-204ENST00000549549 LDHBP07195 334 aaKnown RBP14.1□□□□□ -0.15
PRIM1-204ENST00000549549 HIRAP54198 1017 aaPredicted RBP14.1□□□□□ -0.15
PRIM1-204ENST00000549549 TLL2Q9Y6L7 1015 aa14.1□□□□□ -0.15
PRIM1-204ENST00000549549 ZBTB39O15060 712 aa14.09□□□□□ -0.15
PRIM1-204ENST00000549549 AAMPQ13685 434 aa14.09□□□□□ -0.15
PRIM1-204ENST00000549549 PARP2Q9UGN5 583 aa14.09□□□□□ -0.15
PRIM1-204ENST00000549549 GPR182O15218 404 aa14.08□□□□□ -0.16
PRIM1-204ENST00000549549 BRD2P25440 801 aaKnown RBP14.08□□□□□ -0.16
PRIM1-204ENST00000549549 HDLBPQ00341 1268 aaKnown RBP14.08□□□□□ -0.16
PRIM1-204ENST00000549549 FAM26DQ5JW98 314 aa14.08□□□□□ -0.16
PRIM1-204ENST00000549549 TMC4Q7Z404 712 aa14.08□□□□□ -0.16
PRIM1-204ENST00000549549 USP3Q9Y6I4 520 aa14.08□□□□□ -0.16
PRIM1-204ENST00000549549 XPCQ01831 940 aaPredicted RBP14.07□□□□□ -0.16
PRIM1-204ENST00000549549 NAALADL2Q58DX5 795 aa14.07□□□□□ -0.16
PRIM1-204ENST00000549549 ESYT1Q9BSJ8 1104 aa14.07□□□□□ -0.16
PRIM1-204ENST00000549549 ARHGEF10LQ9HCE6 1279 aa14.07□□□□□ -0.16
PRIM1-204ENST00000549549 RAB6BQ9NRW1 208 aa14.07□□□□□ -0.16
PRIM1-204ENST00000549549 PGPEP1Q9NXJ5 209 aa14.07□□□□□ -0.16
PRIM1-204ENST00000549549 NR3C2P08235 984 aa14.06□□□□□ -0.16
PRIM1-204ENST00000549549 ITGAEP38570 1179 aa14.06□□□□□ -0.16
PRIM1-204ENST00000549549 MAPK8P45983 427 aa14.06□□□□□ -0.16
PRIM1-204ENST00000549549 TEAD4Q15561 434 aa14.06□□□□□ -0.16
PRIM1-204ENST00000549549 DUSP9Q99956 384 aaKnown RBP14.06□□□□□ -0.16
PRIM1-204ENST00000549549 CHMP3Q9Y3E7 222 aa14.06□□□□□ -0.16
PRIM1-204ENST00000549549 EML1O00423 815 aa14.05□□□□□ -0.16
PRIM1-204ENST00000549549 ERCC5P28715 1186 aaPredicted RBP14.05□□□□□ -0.16
PRIM1-204ENST00000549549 DAB2P98082 770 aa14.05□□□□□ -0.16
PRIM1-204ENST00000549549 ZNF295-AS1Q8N0V1 137 aa14.05□□□□□ -0.16
PRIM1-204ENST00000549549 GJD3Q8N144 294 aa14.05□□□□□ -0.16
PRIM1-204ENST00000549549 CNKSR1Q969H4 720 aa14.05□□□□□ -0.16
PRIM1-204ENST00000549549 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.05□□□□□ -0.16
PRIM1-204ENST00000549549 EMILIN1Q9Y6C2 1016 aa14.05□□□□□ -0.16
PRIM1-204ENST00000549549 SERTM1A2A2V5 107 aa14.03□□□□□ -0.16
PRIM1-204ENST00000549549 TLR1Q15399 786 aa14.03□□□□□ -0.16
PRIM1-204ENST00000549549 PPP1R18Q6NYC8 613 aa14.03□□□□□ -0.16
PRIM1-204ENST00000549549 NBPF15Q8N660 670 aa14.03□□□□□ -0.16
PRIM1-204ENST00000549549 KDF1Q8NAX2 398 aaPredicted RBP14.03□□□□□ -0.16
PRIM1-204ENST00000549549 MZF1P28698 734 aaPredicted RBP14.02□□□□□ -0.17
PRIM1-204ENST00000549549 ENOX2Q16206 610 aaKnown RBP14.02□□□□□ -0.17
PRIM1-204ENST00000549549 ATCAYQ86WG3 371 aa14.02□□□□□ -0.17
PRIM1-204ENST00000549549 ZDHHC1Q8WTX9 485 aa14.02□□□□□ -0.17
PRIM1-204ENST00000549549 WWC3Q9ULE0 1092 aa14.02□□□□□ -0.17
PRIM1-204ENST00000549549 NOS2P35228 1153 aa14.01□□□□□ -0.17
PRIM1-204ENST00000549549 USP5P45974 858 aa14.01□□□□□ -0.17
PRIM1-204ENST00000549549 CLN3Q13286 438 aa14.01□□□□□ -0.17
PRIM1-204ENST00000549549 C11orf91Q3C1V1 193 aa14.01□□□□□ -0.17
PRIM1-204ENST00000549549 LIAT1Q6ZQX7 453 aa14.01□□□□□ -0.17
PRIM1-204ENST00000549549 METTL16Q86W50 562 aaKnown RBP14.01□□□□□ -0.17
PRIM1-204ENST00000549549 FAM161BQ96MY7 647 aa14.01□□□□□ -0.17
PRIM1-204ENST00000549549 FHDC1Q9C0D6 1143 aaPredicted RBP14.01□□□□□ -0.17
PRIM1-204ENST00000549549 RNF19AQ9NV58 838 aa14.01□□□□□ -0.17
PRIM1-204ENST00000549549 POLIQ9UNA4 740 aa14.01□□□□□ -0.17
PRIM1-204ENST00000549549 WNT7AO00755 349 aa14□□□□□ -0.17
PRIM1-204ENST00000549549 SORBS3O60504 671 aa14□□□□□ -0.17
PRIM1-204ENST00000549549 ADH1AP07327 375 aa14□□□□□ -0.17
PRIM1-204ENST00000549549 RAD51AP2Q09MP3 1159 aa14□□□□□ -0.17
PRIM1-204ENST00000549549 RTN1Q16799 776 aa14□□□□□ -0.17
PRIM1-204ENST00000549549 ETFBKMTQ8IXQ9 262 aa14□□□□□ -0.17
PRIM1-204ENST00000549549 ALDH16A1Q8IZ83 802 aa14□□□□□ -0.17
PRIM1-204ENST00000549549 NIF3L1Q9GZT8 377 aa14□□□□□ -0.17
PRIM1-204ENST00000549549 ATP2B2Q01814 1243 aa13.99□□□□□ -0.17
PRIM1-204ENST00000549549 SF3A1Q15459 793 aaKnown RBP13.99□□□□□ -0.17
PRIM1-204ENST00000549549 SH3PXD2AQ5TCZ1 1133 aa13.99□□□□□ -0.17
PRIM1-204ENST00000549549 TMEM87AQ8NBN3 555 aa13.99□□□□□ -0.17
PRIM1-204ENST00000549549 EMID1Q96A84 441 aaPredicted RBP13.99□□□□□ -0.17
PRIM1-204ENST00000549549 MRS2Q9HD23 443 aa13.99□□□□□ -0.17
PRIM1-204ENST00000549549 METTL5Q9NRN9 209 aaKnown RBP13.99□□□□□ -0.17
PRIM1-204ENST00000549549 C9orf131Q5VYM1 1079 aa13.98□□□□□ -0.17
PRIM1-204ENST00000549549 ALG1LQ6GMV1 187 aa13.98□□□□□ -0.17
PRIM1-204ENST00000549549 PIK3R5Q8WYR1 880 aa13.98□□□□□ -0.17
PRIM1-204ENST00000549549 NGLY1Q96IV0 654 aa13.98□□□□□ -0.17
PRIM1-204ENST00000549549 CENPCQ03188 943 aa13.97□□□□□ -0.17
PRIM1-204ENST00000549549 PSMD2Q13200 908 aa13.97□□□□□ -0.17
PRIM1-204ENST00000549549 UBXN4Q92575 508 aa13.97□□□□□ -0.17
PRIM1-204ENST00000549549 L3MBTL2Q969R5 705 aa13.97□□□□□ -0.17
PRIM1-204ENST00000549549 PDGFAP04085 211 aa13.96□□□□□ -0.17
PRIM1-204ENST00000549549 MRGPRX2Q96LB1 330 aa13.96□□□□□ -0.17
PRIM1-204ENST00000549549 SETDB2Q96T68 719 aa13.96□□□□□ -0.17
PRIM1-204ENST00000549549 HCN4Q9Y3Q4 1203 aa13.96□□□□□ -0.17
PRIM1-204ENST00000549549 ZAP70P43403 619 aa13.95□□□□□ -0.18
PRIM1-204ENST00000549549 DGKZQ13574 1117 aa13.95□□□□□ -0.18
PRIM1-204ENST00000549549 PPARGC1BQ86YN6 1023 aaKnown RBP13.95□□□□□ -0.18
PRIM1-204ENST00000549549 EDEM1Q92611 657 aa13.95□□□□□ -0.18
PRIM1-204ENST00000549549 IFT43Q96FT9 208 aa13.95□□□□□ -0.18
PRIM1-204ENST00000549549 HCSTQ9UBK5 93 aa13.95□□□□□ -0.18
PRIM1-204ENST00000549549 FANCCQ00597 558 aa13.94□□□□□ -0.18
PRIM1-204ENST00000549549 DNM1Q05193 864 aaKnown RBP13.94□□□□□ -0.18
PRIM1-204ENST00000549549 C1orf53Q5VUE5 145 aa13.94□□□□□ -0.18
PRIM1-204ENST00000549549 Q6ZVU0 165 aa13.94□□□□□ -0.18
PRIM1-204ENST00000549549 CABP1Q9NZU7 370 aa13.94□□□□□ -0.18
PRIM1-204ENST00000549549 ZNF232Q9UNY5 417 aa13.94□□□□□ -0.18
PRIM1-204ENST00000549549 PNMA6FA0A0J9YX94 578 aa13.93□□□□□ -0.18
PRIM1-204ENST00000549549 PTGIRP43119 386 aa13.93□□□□□ -0.18
PRIM1-204ENST00000549549 NT5DC4Q86YG4 428 aa13.93□□□□□ -0.18
PRIM1-204ENST00000549549 FBF1Q8TES7 1133 aa13.93□□□□□ -0.18
PRIM1-204ENST00000549549 CFHR5Q9BXR6 569 aa13.93□□□□□ -0.18
PRIM1-204ENST00000549549 PHACTR1Q9C0D0 580 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms