RNA–Protein interactions for RNA: ENST00000549094.1

SMPDL3B-206, Transcript of sphingomyelin phosphodiesterase acid like 3B, humanhuman

TSL 5 BASIC

Gene SMPDL3B, Length 1,611 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3B-206ENST00000549094 AMPHP49418 695 aa16.39■□□□□ 0.21
SMPDL3B-206ENST00000549094 ARHGEF25Q86VW2 580 aa16.39■□□□□ 0.21
SMPDL3B-206ENST00000549094 PDLIM2Q96JY6 352 aa16.39■□□□□ 0.21
SMPDL3B-206ENST00000549094 N4BP2Q86UW6 1770 aaPredicted RBP16.39■□□□□ 0.21
SMPDL3B-206ENST00000549094 LTN1O94822 1766 aa16.38■□□□□ 0.21
SMPDL3B-206ENST00000549094 CSPP1Q1MSJ5 1256 aa16.38■□□□□ 0.21
SMPDL3B-206ENST00000549094 MAP7D2Q96T17 732 aa16.38■□□□□ 0.21
SMPDL3B-206ENST00000549094 OSBPL3Q9H4L5 887 aa16.38■□□□□ 0.21
SMPDL3B-206ENST00000549094 CPDO75976 1380 aa16.38■□□□□ 0.21
SMPDL3B-206ENST00000549094 ZNF500O60304 480 aaPredicted RBP16.37■□□□□ 0.21
SMPDL3B-206ENST00000549094 PDCL3Q9H2J4 239 aa16.37■□□□□ 0.21
SMPDL3B-206ENST00000549094 NOL7Q9UMY1 257 aaKnown RBP16.37■□□□□ 0.21
SMPDL3B-206ENST00000549094 SLIT2O94813 1529 aa16.37■□□□□ 0.21
SMPDL3B-206ENST00000549094 RXRBP28702 533 aa16.37■□□□□ 0.21
SMPDL3B-206ENST00000549094 LRSAM1Q6UWE0 723 aa16.37■□□□□ 0.21
SMPDL3B-206ENST00000549094 SYAP1Q96A49 352 aaPredicted RBP16.37■□□□□ 0.21
SMPDL3B-206ENST00000549094 PRDM11Q9NQV5 511 aa16.37■□□□□ 0.21
SMPDL3B-206ENST00000549094 CCDC39Q9UFE4 941 aa16.37■□□□□ 0.21
SMPDL3B-206ENST00000549094 USP21Q9UK80 565 aa16.37■□□□□ 0.21
SMPDL3B-206ENST00000549094 FLT4P35916 1363 aa16.36■□□□□ 0.21
SMPDL3B-206ENST00000549094 CHL1O00533 1208 aa16.36■□□□□ 0.21
SMPDL3B-206ENST00000549094 ATRNO75882 1429 aa16.36■□□□□ 0.21
SMPDL3B-206ENST00000549094 COL14A1Q05707 1796 aaKnown RBP16.36■□□□□ 0.21
SMPDL3B-206ENST00000549094 BCL9LQ86UU0 1499 aa16.35■□□□□ 0.21
SMPDL3B-206ENST00000549094 CCT4P50991 539 aaKnown RBP16.35■□□□□ 0.21
SMPDL3B-206ENST00000549094 RBM6P78332 1123 aaKnown RBP16.35■□□□□ 0.21
SMPDL3B-206ENST00000549094 IP6K1Q92551 441 aa16.35■□□□□ 0.21
SMPDL3B-206ENST00000549094 QTRT2Q9H974 415 aaKnown RBP16.35■□□□□ 0.21
SMPDL3B-206ENST00000549094 TRPC5Q9UL62 973 aaPredicted RBP16.35■□□□□ 0.21
SMPDL3B-206ENST00000549094 HOXC9P31274 260 aa16.34■□□□□ 0.21
SMPDL3B-206ENST00000549094 ANAPC15P60006 121 aa16.34■□□□□ 0.21
SMPDL3B-206ENST00000549094 RBSNQ9H1K0 784 aa16.34■□□□□ 0.21
SMPDL3B-206ENST00000549094 PEAK1Q9H792 1746 aa16.34■□□□□ 0.21
SMPDL3B-206ENST00000549094 FAM208AQ9UK61 1670 aaKnown RBP16.34■□□□□ 0.21
SMPDL3B-206ENST00000549094 PRPF40AO75400 957 aaKnown RBP16.34■□□□□ 0.21
SMPDL3B-206ENST00000549094 PHF14O94880 888 aa16.34■□□□□ 0.21
SMPDL3B-206ENST00000549094 CHRNA2Q15822 529 aa16.34■□□□□ 0.21
SMPDL3B-206ENST00000549094 NRAPQ86VF7 1730 aa16.33■□□□□ 0.2
SMPDL3B-206ENST00000549094 FAM83GA6ND36 823 aa16.33■□□□□ 0.2
SMPDL3B-206ENST00000549094 EPB41L2O43491 1005 aaKnown RBP16.33■□□□□ 0.2
SMPDL3B-206ENST00000549094 HSP90AB2PQ58FF8 381 aa16.33■□□□□ 0.2
SMPDL3B-206ENST00000549094 C16orf71Q8IYS4 520 aaPredicted RBP16.33■□□□□ 0.2
SMPDL3B-206ENST00000549094 INTS4Q96HW7 963 aaKnown RBP16.33■□□□□ 0.2
SMPDL3B-206ENST00000549094 ZKSCAN5Q9Y2L8 839 aa16.33■□□□□ 0.2
SMPDL3B-206ENST00000549094 ABCC6O95255 1503 aa16.32■□□□□ 0.2
SMPDL3B-206ENST00000549094 GPT2Q8TD30 523 aa16.32■□□□□ 0.2
SMPDL3B-206ENST00000549094 PRIM1P49642 420 aaKnown RBP16.31■□□□□ 0.2
SMPDL3B-206ENST00000549094 PDE1AP54750 535 aa16.31■□□□□ 0.2
SMPDL3B-206ENST00000549094 CUL4AQ13619 759 aa16.31■□□□□ 0.2
SMPDL3B-206ENST00000549094 MTERF4Q7Z6M4 381 aaKnown RBP16.31■□□□□ 0.2
SMPDL3B-206ENST00000549094 ZGPATQ8N5A5 531 aaKnown RBP16.31■□□□□ 0.2
SMPDL3B-206ENST00000549094 OTUD7AQ8TE49 926 aaPredicted RBP16.31■□□□□ 0.2
SMPDL3B-206ENST00000549094 MEIS3Q99687 375 aa16.31■□□□□ 0.2
SMPDL3B-206ENST00000549094 AOX1Q06278 1338 aa16.31■□□□□ 0.2
SMPDL3B-206ENST00000549094 CRB1P82279 1406 aa16.31■□□□□ 0.2
SMPDL3B-206ENST00000549094 LRRC37A3O60309 1634 aa16.31■□□□□ 0.2
SMPDL3B-206ENST00000549094 COL18A1P39060 1754 aa16.3■□□□□ 0.2
SMPDL3B-206ENST00000549094 PXDNLA1KZ92 1463 aa16.3■□□□□ 0.2
SMPDL3B-206ENST00000549094 IL17RAQ96F46 866 aa16.3■□□□□ 0.2
SMPDL3B-206ENST00000549094 ZDHHC9Q9Y397 364 aa16.3■□□□□ 0.2
SMPDL3B-206ENST00000549094 CACNA1FO60840 1977 aa16.3■□□□□ 0.2
SMPDL3B-206ENST00000549094 SMARCA5O60264 1052 aaPredicted RBP16.3■□□□□ 0.2
SMPDL3B-206ENST00000549094 BRD1O95696 1058 aa16.3■□□□□ 0.2
SMPDL3B-206ENST00000549094 PKP1Q13835 747 aa16.3■□□□□ 0.2
SMPDL3B-206ENST00000549094 DCTN1Q14203 1278 aa16.3■□□□□ 0.2
SMPDL3B-206ENST00000549094 EIF4A2Q14240 407 aaKnown RBP16.3■□□□□ 0.2
SMPDL3B-206ENST00000549094 UNC5CLQ8IV45 518 aa16.3■□□□□ 0.2
SMPDL3B-206ENST00000549094 SRCIN1Q9C0H9 1055 aa16.3■□□□□ 0.2
SMPDL3B-206ENST00000549094 AXIN2Q9Y2T1 843 aa16.3■□□□□ 0.2
SMPDL3B-206ENST00000549094 GNAI2P04899 355 aa16.29■□□□□ 0.2
SMPDL3B-206ENST00000549094 SULT6B1Q6IMI4 303 aa16.29■□□□□ 0.2
SMPDL3B-206ENST00000549094 VSIG10Q8N0Z9 540 aa16.29■□□□□ 0.2
SMPDL3B-206ENST00000549094 KLHL34Q8N239 644 aa16.29■□□□□ 0.2
SMPDL3B-206ENST00000549094 TMX3Q96JJ7 454 aa16.29■□□□□ 0.2
SMPDL3B-206ENST00000549094 ESYT1Q9BSJ8 1104 aa16.29■□□□□ 0.2
SMPDL3B-206ENST00000549094 TSPY26PQ9H489 355 aa16.29■□□□□ 0.2
SMPDL3B-206ENST00000549094 RGPD5Q99666 1765 aa16.29■□□□□ 0.2
SMPDL3B-206ENST00000549094 SOS1Q07889 1333 aaPredicted RBP16.29■□□□□ 0.2
SMPDL3B-206ENST00000549094 LMO7Q8WWI1 1683 aa16.28■□□□□ 0.2
SMPDL3B-206ENST00000549094 GNAI3P08754 354 aa16.28■□□□□ 0.2
SMPDL3B-206ENST00000549094 NEK4P51957 841 aa16.28■□□□□ 0.2
SMPDL3B-206ENST00000549094 LTV1Q96GA3 475 aaPredicted RBP16.28■□□□□ 0.2
SMPDL3B-206ENST00000549094 TMEM63CQ9P1W3 806 aa16.28■□□□□ 0.2
SMPDL3B-206ENST00000549094 GLI3P10071 1580 aa16.28■□□□□ 0.2
SMPDL3B-206ENST00000549094 ANKRD24Q8TF21 1146 aa16.27■□□□□ 0.2
SMPDL3B-206ENST00000549094 RBM27Q9P2N5 1060 aaKnown RBP16.27■□□□□ 0.2
SMPDL3B-206ENST00000549094 SALL3Q9BXA9 1300 aa16.27■□□□□ 0.2
SMPDL3B-206ENST00000549094 SYCE3A1L190 88 aa16.27■□□□□ 0.19
SMPDL3B-206ENST00000549094 APBB1O00213 710 aa16.27■□□□□ 0.19
SMPDL3B-206ENST00000549094 FAM184AQ8NB25 1140 aa16.27■□□□□ 0.19
SMPDL3B-206ENST00000549094 LRRCC1Q9C099 1032 aa16.27■□□□□ 0.19
SMPDL3B-206ENST00000549094 BTG4Q9NY30 223 aa16.27■□□□□ 0.19
SMPDL3B-206ENST00000549094 CAMTA1Q9Y6Y1 1673 aa16.26■□□□□ 0.19
SMPDL3B-206ENST00000549094 EVA1CP58658 441 aa16.26■□□□□ 0.19
SMPDL3B-206ENST00000549094 PKNOX2Q96KN3 472 aa16.26■□□□□ 0.19
SMPDL3B-206ENST00000549094 GJD4Q96KN9 370 aaPredicted RBP16.26■□□□□ 0.19
SMPDL3B-206ENST00000549094 R3HCC1Q9Y3T6 440 aaKnown RBP16.26■□□□□ 0.19
SMPDL3B-206ENST00000549094 ERBB3P21860 1342 aa16.26■□□□□ 0.19
SMPDL3B-206ENST00000549094 DYNC1I1O14576 645 aa16.25■□□□□ 0.19
SMPDL3B-206ENST00000549094 SLC4A2P04920 1241 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms