RNA–Protein interactions for RNA: ENST00000549034.1

RAB5B-205, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5B, Length 558 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-205ENST00000549034 PDGFDQ9GZP0 370 aaPredicted RBP12.52□□□□□ -0.41
RAB5B-205ENST00000549034 RTCBQ9Y3I0 505 aaKnown RBP12.52□□□□□ -0.41
RAB5B-205ENST00000549034 USP16Q9Y5T5 823 aa12.52□□□□□ -0.41
RAB5B-205ENST00000549034 HEG1Q9ULI3 1381 aa12.52□□□□□ -0.41
RAB5B-205ENST00000549034 C5P01031 1676 aa12.51□□□□□ -0.41
RAB5B-205ENST00000549034 PRAMEF22A3QJZ6 481 aa12.51□□□□□ -0.41
RAB5B-205ENST00000549034 RPS6KA4O75676 772 aa12.51□□□□□ -0.41
RAB5B-205ENST00000549034 CANXP27824 592 aaKnown RBP12.51□□□□□ -0.41
RAB5B-205ENST00000549034 GNAI1P63096 354 aa12.51□□□□□ -0.41
RAB5B-205ENST00000549034 TRAPPC3LQ5T215 181 aa12.51□□□□□ -0.41
RAB5B-205ENST00000549034 INTS5Q6P9B9 1019 aaKnown RBP12.51□□□□□ -0.41
RAB5B-205ENST00000549034 FLAD1Q8NFF5 587 aa12.51□□□□□ -0.41
RAB5B-205ENST00000549034 CFAP44Q96MT7 982 aa12.51□□□□□ -0.41
RAB5B-205ENST00000549034 A1BGP04217 495 aa12.5□□□□□ -0.41
RAB5B-205ENST00000549034 CCDC87Q9NVE4 849 aa12.5□□□□□ -0.41
RAB5B-205ENST00000549034 PNPLA7Q6ZV29 1317 aa12.5□□□□□ -0.41
RAB5B-205ENST00000549034 KCPQ6ZWJ8 1503 aa12.5□□□□□ -0.41
RAB5B-205ENST00000549034 C4BP0C0L5 1744 aa12.49□□□□□ -0.41
RAB5B-205ENST00000549034 PAPPAQ13219 1627 aa12.49□□□□□ -0.41
RAB5B-205ENST00000549034 CNTNAP4Q9C0A0 1308 aa12.49□□□□□ -0.41
RAB5B-205ENST00000549034 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.49□□□□□ -0.41
RAB5B-205ENST00000549034 GIGYF1O75420 1035 aaPredicted RBP12.49□□□□□ -0.41
RAB5B-205ENST00000549034 CAPN15O75808 1086 aa12.49□□□□□ -0.41
RAB5B-205ENST00000549034 ZBTB7AO95365 584 aa12.49□□□□□ -0.41
RAB5B-205ENST00000549034 ZNF853P0CG23 659 aa12.49□□□□□ -0.41
RAB5B-205ENST00000549034 AMIGO3Q86WK7 504 aa12.49□□□□□ -0.41
RAB5B-205ENST00000549034 WDR63Q8IWG1 891 aa12.49□□□□□ -0.41
RAB5B-205ENST00000549034 NGEFQ8N5V2 710 aa12.49□□□□□ -0.41
RAB5B-205ENST00000549034 ARHGEF1Q92888 912 aaKnown RBP12.49□□□□□ -0.41
RAB5B-205ENST00000549034 MBIPQ9NS73 344 aa12.49□□□□□ -0.41
RAB5B-205ENST00000549034 IFT57Q9NWB7 429 aa12.49□□□□□ -0.41
RAB5B-205ENST00000549034 MYH14Q7Z406 1995 aaKnown RBP12.49□□□□□ -0.41
RAB5B-205ENST00000549034 EIF2S2P20042 333 aaKnown RBP12.48□□□□□ -0.41
RAB5B-205ENST00000549034 SSFA2P28290 1259 aa12.48□□□□□ -0.41
RAB5B-205ENST00000549034 RFC4P35249 363 aa12.48□□□□□ -0.41
RAB5B-205ENST00000549034 ARXQ96QS3 562 aa12.48□□□□□ -0.41
RAB5B-205ENST00000549034 ZNF330Q9Y3S2 320 aaPredicted RBP12.48□□□□□ -0.41
RAB5B-205ENST00000549034 UBR2Q8IWV8 1755 aa12.48□□□□□ -0.41
RAB5B-205ENST00000549034 ZNF831Q5JPB2 1677 aa12.48□□□□□ -0.41
RAB5B-205ENST00000549034 ELL2O00472 640 aaPredicted RBP12.47□□□□□ -0.41
RAB5B-205ENST00000549034 PIP4K2AP48426 406 aaPredicted RBP12.47□□□□□ -0.41
RAB5B-205ENST00000549034 KRT24Q2M2I5 525 aa12.47□□□□□ -0.41
RAB5B-205ENST00000549034 NPM2Q86SE8 214 aaKnown RBP12.47□□□□□ -0.41
RAB5B-205ENST00000549034 SLC16A10Q8TF71 515 aa12.47□□□□□ -0.41
RAB5B-205ENST00000549034 SPON1Q9HCB6 807 aa12.47□□□□□ -0.41
RAB5B-205ENST00000549034 ZBTB1Q9Y2K1 713 aa12.47□□□□□ -0.41
RAB5B-205ENST00000549034 KDM3BQ7LBC6 1761 aa12.46□□□□□ -0.41
RAB5B-205ENST00000549034 TJP1Q07157 1748 aa12.46□□□□□ -0.41
RAB5B-205ENST00000549034 NECTIN2Q92692 538 aa12.46□□□□□ -0.41
RAB5B-205ENST00000549034 ZNF219Q9P2Y4 722 aaPredicted RBP12.46□□□□□ -0.41
RAB5B-205ENST00000549034 COL5A3P25940 1745 aaPredicted RBP12.45□□□□□ -0.42
RAB5B-205ENST00000549034 IL16Q14005 1332 aa12.45□□□□□ -0.42
RAB5B-205ENST00000549034 DUSP27Q5VZP5 1158 aa12.45□□□□□ -0.42
RAB5B-205ENST00000549034 TSR2Q969E8 191 aaKnown RBP12.45□□□□□ -0.42
RAB5B-205ENST00000549034 MTFR1LQ9H019 292 aa12.45□□□□□ -0.42
RAB5B-205ENST00000549034 TUBGCP6Q96RT7 1819 aa12.45□□□□□ -0.42
RAB5B-205ENST00000549034 UBR3Q6ZT12 1888 aa12.44□□□□□ -0.42
RAB5B-205ENST00000549034 A0A087WZG4 1122 aa12.44□□□□□ -0.42
RAB5B-205ENST00000549034 ZPR1O75312 459 aa12.44□□□□□ -0.42
RAB5B-205ENST00000549034 MYL6BP14649 208 aa12.44□□□□□ -0.42
RAB5B-205ENST00000549034 IL6STP40189 918 aaPredicted RBP12.44□□□□□ -0.42
RAB5B-205ENST00000549034 EIF5P55010 431 aaKnown RBP12.44□□□□□ -0.42
RAB5B-205ENST00000549034 GOLGA2Q08379 1002 aa12.44□□□□□ -0.42
RAB5B-205ENST00000549034 MSL1Q68DK7 614 aa12.44□□□□□ -0.42
RAB5B-205ENST00000549034 TBC1D2BQ9UPU7 963 aa12.44□□□□□ -0.42
RAB5B-205ENST00000549034 SOS1Q07889 1333 aaPredicted RBP12.43□□□□□ -0.42
RAB5B-205ENST00000549034 NBPF26B4DH59 902 aa12.43□□□□□ -0.42
RAB5B-205ENST00000549034 NBPF10Q6P3W6 841 aaKnown RBP12.43□□□□□ -0.42
RAB5B-205ENST00000549034 NBPF15Q8N660 670 aa12.43□□□□□ -0.42
RAB5B-205ENST00000549034 C8orf58Q8NAV2 365 aa12.43□□□□□ -0.42
RAB5B-205ENST00000549034 SRP68Q9UHB9 627 aaKnown RBP12.43□□□□□ -0.42
RAB5B-205ENST00000549034 QSER1Q2KHR3 1735 aa12.42□□□□□ -0.42
RAB5B-205ENST00000549034 POLD1P28340 1107 aa12.42□□□□□ -0.42
RAB5B-205ENST00000549034 HNRNPUQ00839 825 aaKnown RBP eCLIP12.42□□□□□ -0.42
RAB5B-205ENST00000549034 USPL1Q5W0Q7 1092 aa12.42□□□□□ -0.42
RAB5B-205ENST00000549034 NLGN1Q8N2Q7 840 aa12.42□□□□□ -0.42
RAB5B-205ENST00000549034 MYH16Q9H6N6 1097 aa12.42□□□□□ -0.42
RAB5B-205ENST00000549034 PPP1R1BQ9UD71 204 aaPredicted RBP12.42□□□□□ -0.42
RAB5B-205ENST00000549034 GYS1P13807 737 aa12.41□□□□□ -0.42
RAB5B-205ENST00000549034 HDGFL1Q5TGJ6 251 aa12.41□□□□□ -0.42
RAB5B-205ENST00000549034 DZIP3Q86Y13 1208 aaKnown RBP12.41□□□□□ -0.42
RAB5B-205ENST00000549034 TSPYL6Q8N831 410 aa12.41□□□□□ -0.42
RAB5B-205ENST00000549034 NARFQ9UHQ1 456 aa12.41□□□□□ -0.42
RAB5B-205ENST00000549034 CASZ1Q86V15 1759 aa12.41□□□□□ -0.42
RAB5B-205ENST00000549034 CICQ96RK0 1608 aaPredicted RBP12.4□□□□□ -0.42
RAB5B-205ENST00000549034 ZNF521Q96K83 1311 aa12.4□□□□□ -0.42
RAB5B-205ENST00000549034 ANXA1P04083 346 aa12.4□□□□□ -0.42
RAB5B-205ENST00000549034 HOXB7P09629 217 aa12.4□□□□□ -0.42
RAB5B-205ENST00000549034 EXOSC9Q06265 439 aaKnown RBP12.4□□□□□ -0.42
RAB5B-205ENST00000549034 CDCA7LQ96GN5 454 aa12.4□□□□□ -0.42
RAB5B-205ENST00000549034 COL15A1P39059 1388 aa12.4□□□□□ -0.42
RAB5B-205ENST00000549034 USP42Q9H9J4 1324 aaKnown RBP12.39□□□□□ -0.43
RAB5B-205ENST00000549034 FANCIQ9NVI1 1328 aa12.39□□□□□ -0.43
RAB5B-205ENST00000549034 E9PSI1 815 aa12.39□□□□□ -0.43
RAB5B-205ENST00000549034 PTGER2P43116 358 aa12.39□□□□□ -0.43
RAB5B-205ENST00000549034 SLFN5Q08AF3 891 aa12.39□□□□□ -0.43
RAB5B-205ENST00000549034 AIMP1Q12904 312 aaKnown RBP12.39□□□□□ -0.43
RAB5B-205ENST00000549034 FKBP8Q14318 412 aa12.39□□□□□ -0.43
RAB5B-205ENST00000549034 PDIA6Q15084 440 aa12.39□□□□□ -0.43
RAB5B-205ENST00000549034 TWISTNBQ3B726 338 aaPredicted RBP12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms