RNA–Protein interactions for RNA: ENST00000548296.1

RPAP3-206, Transcript of RNA polymerase II associated protein 3, humanhuman

TSL 3

Gene RPAP3, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP3-206ENST00000548296 NDFIP2Q9NV92 336 aa8.14□□□□□ -1.11
RPAP3-206ENST00000548296 NOD1Q9Y239 953 aa8.14□□□□□ -1.11
RPAP3-206ENST00000548296 PCDHGC4Q9Y5F7 938 aa8.14□□□□□ -1.11
RPAP3-206ENST00000548296 A6NJY4 79 aa8.13□□□□□ -1.11
RPAP3-206ENST00000548296 MTFR1Q15390 333 aa8.13□□□□□ -1.11
RPAP3-206ENST00000548296 ALYREFQ86V81 257 aaKnown RBP8.13□□□□□ -1.11
RPAP3-206ENST00000548296 EDARADDQ8WWZ3 215 aa8.13□□□□□ -1.11
RPAP3-206ENST00000548296 ABHD17AQ96GS6 310 aa8.13□□□□□ -1.11
RPAP3-206ENST00000548296 DCAF5Q96JK2 942 aa8.13□□□□□ -1.11
RPAP3-206ENST00000548296 SERTAD1Q9UHV2 236 aa8.13□□□□□ -1.11
RPAP3-206ENST00000548296 MKL2Q9ULH7 1088 aa8.13□□□□□ -1.11
RPAP3-206ENST00000548296 ARID3CA6NKF2 412 aa8.12□□□□□ -1.11
RPAP3-206ENST00000548296 PIK3R2O00459 728 aa8.12□□□□□ -1.11
RPAP3-206ENST00000548296 TATP17735 454 aaPredicted RBP8.12□□□□□ -1.11
RPAP3-206ENST00000548296 ZCCHC2Q9C0B9 1178 aaKnown RBP8.12□□□□□ -1.11
RPAP3-206ENST00000548296 ALG2Q9H553 416 aa8.12□□□□□ -1.11
RPAP3-206ENST00000548296 ZDHHC3Q9NYG2 299 aa8.12□□□□□ -1.11
RPAP3-206ENST00000548296 PCDHGA11Q9Y5H2 935 aa8.12□□□□□ -1.11
RPAP3-206ENST00000548296 TMEM229AB2RXF0 380 aa8.11□□□□□ -1.11
RPAP3-206ENST00000548296 MSTNO14793 375 aa8.11□□□□□ -1.11
RPAP3-206ENST00000548296 SKIP12755 728 aa8.11□□□□□ -1.11
RPAP3-206ENST00000548296 ARSJQ5FYB0 599 aaPredicted RBP8.11□□□□□ -1.11
RPAP3-206ENST00000548296 ATXN7O15265 892 aaPredicted RBP8.1□□□□□ -1.11
RPAP3-206ENST00000548296 ARAFP10398 606 aa8.1□□□□□ -1.11
RPAP3-206ENST00000548296 ATP4AP20648 1035 aa8.1□□□□□ -1.11
RPAP3-206ENST00000548296 CTBSQ01459 385 aa8.1□□□□□ -1.11
RPAP3-206ENST00000548296 SLCO4C1Q6ZQN7 724 aa8.1□□□□□ -1.11
RPAP3-206ENST00000548296 RRAGCQ9HB90 399 aa8.1□□□□□ -1.11
RPAP3-206ENST00000548296 CABP1Q9NZU7 370 aa8.1□□□□□ -1.11
RPAP3-206ENST00000548296 A0A1W2PNR3 127 aa8.09□□□□□ -1.11
RPAP3-206ENST00000548296 SHISA8B8ZZ34 492 aa8.09□□□□□ -1.11
RPAP3-206ENST00000548296 C2CD2LO14523 706 aa8.09□□□□□ -1.11
RPAP3-206ENST00000548296 AMPD1P23109 780 aa8.09□□□□□ -1.11
RPAP3-206ENST00000548296 GTF2IP78347 998 aa8.09□□□□□ -1.11
RPAP3-206ENST00000548296 PLA2G4EQ3MJ16 856 aa8.09□□□□□ -1.11
RPAP3-206ENST00000548296 FAM182BQ5T319 152 aa8.09□□□□□ -1.11
RPAP3-206ENST00000548296 DNAAF2Q9NVR5 837 aaKnown RBP8.09□□□□□ -1.11
RPAP3-206ENST00000548296 GGA1Q9UJY5 639 aa8.09□□□□□ -1.11
RPAP3-206ENST00000548296 IQSEC3Q9UPP2 1182 aaPredicted RBP8.09□□□□□ -1.11
RPAP3-206ENST00000548296 GJA3Q9Y6H8 435 aa8.09□□□□□ -1.11
RPAP3-206ENST00000548296 PIK3CDO00329 1044 aa8.08□□□□□ -1.12
RPAP3-206ENST00000548296 SNRPNP63162 240 aaKnown RBP8.08□□□□□ -1.12
RPAP3-206ENST00000548296 PSME1Q06323 249 aa8.08□□□□□ -1.12
RPAP3-206ENST00000548296 C1orf229Q6ZS94 237 aaPredicted RBP8.08□□□□□ -1.12
RPAP3-206ENST00000548296 TRIM50Q86XT4 487 aa8.07□□□□□ -1.12
RPAP3-206ENST00000548296 ZNF295-AS1Q8N0V1 137 aa8.07□□□□□ -1.12
RPAP3-206ENST00000548296 CCDC82Q8N4S0 544 aa8.07□□□□□ -1.12
RPAP3-206ENST00000548296 AVENQ9NQS1 362 aaPredicted RBP8.07□□□□□ -1.12
RPAP3-206ENST00000548296 MAPTP10636 758 aaKnown RBP8.06□□□□□ -1.12
RPAP3-206ENST00000548296 EPXP11678 715 aa8.06□□□□□ -1.12
RPAP3-206ENST00000548296 TNP2Q05952 138 aa8.06□□□□□ -1.12
RPAP3-206ENST00000548296 NCOA4Q13772 614 aa8.06□□□□□ -1.12
RPAP3-206ENST00000548296 BICDL1Q6ZP65 573 aa8.06□□□□□ -1.12
RPAP3-206ENST00000548296 ZIC5Q96T25 663 aa8.06□□□□□ -1.12
RPAP3-206ENST00000548296 USP17L5A8MUK1 530 aa8.05□□□□□ -1.12
RPAP3-206ENST00000548296 ADH6P28332 368 aa8.05□□□□□ -1.12
RPAP3-206ENST00000548296 ATP1A2P50993 1020 aa8.05□□□□□ -1.12
RPAP3-206ENST00000548296 LAMC2Q13753 1193 aa8.05□□□□□ -1.12
RPAP3-206ENST00000548296 BTBD6Q96KE9 485 aa8.05□□□□□ -1.12
RPAP3-206ENST00000548296 SPOCK3Q9BQ16 436 aa8.05□□□□□ -1.12
RPAP3-206ENST00000548296 SCHIP1Q9P0W5 487 aaPredicted RBP8.05□□□□□ -1.12
RPAP3-206ENST00000548296 ZNF777Q9ULD5 760 aaPredicted RBP8.05□□□□□ -1.12
RPAP3-206ENST00000548296 NEURL1BA8MQ27 555 aa8.04□□□□□ -1.12
RPAP3-206ENST00000548296 GNB5O14775 395 aa8.04□□□□□ -1.12
RPAP3-206ENST00000548296 KHNYNO15037 678 aaKnown RBP8.04□□□□□ -1.12
RPAP3-206ENST00000548296 FAM157BP0CG42 384 aa8.04□□□□□ -1.12
RPAP3-206ENST00000548296 TEAD4Q15561 434 aa8.04□□□□□ -1.12
RPAP3-206ENST00000548296 SAMD5Q5TGI4 173 aa8.04□□□□□ -1.12
RPAP3-206ENST00000548296 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.04□□□□□ -1.12
RPAP3-206ENST00000548296 ARID3AQ99856 593 aa8.04□□□□□ -1.12
RPAP3-206ENST00000548296 NEUROD4Q9HD90 331 aa8.04□□□□□ -1.12
RPAP3-206ENST00000548296 ZNF358Q9NW07 568 aa8.04□□□□□ -1.12
RPAP3-206ENST00000548296 SERPINA10Q9UK55 444 aa8.04□□□□□ -1.12
RPAP3-206ENST00000548296 GPC6Q9Y625 555 aaPredicted RBP8.04□□□□□ -1.12
RPAP3-206ENST00000548296 DCDC2BA2VCK2 349 aa8.03□□□□□ -1.12
RPAP3-206ENST00000548296 PLEKHM2Q8IWE5 1019 aa8.03□□□□□ -1.12
RPAP3-206ENST00000548296 L3MBTL2Q969R5 705 aa8.03□□□□□ -1.12
RPAP3-206ENST00000548296 PRR12Q9ULL5 1215 aa8.03□□□□□ -1.12
RPAP3-206ENST00000548296 NOS2P35228 1153 aa8.02□□□□□ -1.13
RPAP3-206ENST00000548296 LINC00114Q6XXX2 140 aa8.02□□□□□ -1.13
RPAP3-206ENST00000548296 NOP53Q9NZM5 478 aaKnown RBP8.02□□□□□ -1.13
RPAP3-206ENST00000548296 MARK1Q9P0L2 795 aa8.02□□□□□ -1.13
RPAP3-206ENST00000548296 USP3Q9Y6I4 520 aa8.02□□□□□ -1.13
RPAP3-206ENST00000548296 CD33P20138 364 aa8.01□□□□□ -1.13
RPAP3-206ENST00000548296 DEPDC4Q8N2C3 294 aa8.01□□□□□ -1.13
RPAP3-206ENST00000548296 ZNF232Q9UNY5 417 aa8.01□□□□□ -1.13
RPAP3-206ENST00000548296 CHMP3Q9Y3E7 222 aa8.01□□□□□ -1.13
RPAP3-206ENST00000548296 PARP3Q9Y6F1 533 aa8.01□□□□□ -1.13
RPAP3-206ENST00000548296 KRBA1A5PL33 1030 aa8□□□□□ -1.13
RPAP3-206ENST00000548296 HOXB4P17483 251 aaPredicted RBP8□□□□□ -1.13
RPAP3-206ENST00000548296 HDGFL1Q5TGJ6 251 aa8□□□□□ -1.13
RPAP3-206ENST00000548296 ZNF468Q5VIY5 522 aaPredicted RBP8□□□□□ -1.13
RPAP3-206ENST00000548296 SLC9A9Q8IVB4 645 aa8□□□□□ -1.13
RPAP3-206ENST00000548296 CCDC97Q96F63 343 aaPredicted RBP8□□□□□ -1.13
RPAP3-206ENST00000548296 SERTM1A2A2V5 107 aa7.99□□□□□ -1.13
RPAP3-206ENST00000548296 EML1O00423 815 aa7.99□□□□□ -1.13
RPAP3-206ENST00000548296 EFSO43281 561 aa7.99□□□□□ -1.13
RPAP3-206ENST00000548296 PROCP04070 461 aa7.99□□□□□ -1.13
RPAP3-206ENST00000548296 ITGB2P05107 769 aa7.99□□□□□ -1.13
RPAP3-206ENST00000548296 TXLNAP40222 546 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms