RNA–Protein interactions for RNA: ENST00000548173.5

PRIM1-203, Transcript of DNA primase subunit 1, humanhuman

TSL 4

Gene PRIM1, Length 590 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1-203ENST00000548173 RTF1Q92541 710 aaKnown RBP10.51□□□□□ -0.73
PRIM1-203ENST00000548173 PRKRIP1Q9H875 184 aaPredicted RBP10.51□□□□□ -0.73
PRIM1-203ENST00000548173 CCDC87Q9NVE4 849 aa10.51□□□□□ -0.73
PRIM1-203ENST00000548173 HEG1Q9ULI3 1381 aa10.51□□□□□ -0.73
PRIM1-203ENST00000548173 BTBD11A6QL63 1104 aa10.5□□□□□ -0.73
PRIM1-203ENST00000548173 KCNQ3O43525 872 aa10.5□□□□□ -0.73
PRIM1-203ENST00000548173 GYS1P13807 737 aa10.5□□□□□ -0.73
PRIM1-203ENST00000548173 NLGN1Q8N2Q7 840 aa10.5□□□□□ -0.73
PRIM1-203ENST00000548173 NLGN2Q8NFZ4 835 aa10.5□□□□□ -0.73
PRIM1-203ENST00000548173 PNNQ9H307 717 aaKnown RBP10.5□□□□□ -0.73
PRIM1-203ENST00000548173 CD2APQ9Y5K6 639 aa10.5□□□□□ -0.73
PRIM1-203ENST00000548173 MMP10P09238 476 aa10.49□□□□□ -0.73
PRIM1-203ENST00000548173 NFE2L2Q16236 605 aa10.49□□□□□ -0.73
PRIM1-203ENST00000548173 ZBTB1Q9Y2K1 713 aa10.49□□□□□ -0.73
PRIM1-203ENST00000548173 SOS1Q07889 1333 aaPredicted RBP10.49□□□□□ -0.73
PRIM1-203ENST00000548173 USP42Q9H9J4 1324 aaKnown RBP10.49□□□□□ -0.73
PRIM1-203ENST00000548173 C4AP0C0L4 1744 aa10.49□□□□□ -0.73
PRIM1-203ENST00000548173 STARD3NLO95772 234 aa10.48□□□□□ -0.73
PRIM1-203ENST00000548173 TAF7Q15545 349 aaPredicted RBP10.48□□□□□ -0.73
PRIM1-203ENST00000548173 FMNL2Q96PY5 1086 aa10.48□□□□□ -0.73
PRIM1-203ENST00000548173 TEX13AQ9BXU3 409 aaPredicted RBP10.48□□□□□ -0.73
PRIM1-203ENST00000548173 SRP68Q9UHB9 627 aaKnown RBP10.48□□□□□ -0.73
PRIM1-203ENST00000548173 MAPK8IP3Q9UPT6 1336 aa10.48□□□□□ -0.73
PRIM1-203ENST00000548173 DLG5Q8TDM6 1919 aa10.48□□□□□ -0.73
PRIM1-203ENST00000548173 ZNF316A6NFI3 1004 aaPredicted RBP10.47□□□□□ -0.73
PRIM1-203ENST00000548173 CANXP27824 592 aaKnown RBP10.46□□□□□ -0.73
PRIM1-203ENST00000548173 EIF5P55010 431 aaKnown RBP10.46□□□□□ -0.73
PRIM1-203ENST00000548173 FKBP8Q14318 412 aa10.46□□□□□ -0.73
PRIM1-203ENST00000548173 GPR162Q16538 588 aa10.46□□□□□ -0.73
PRIM1-203ENST00000548173 THUMPD2Q9BTF0 503 aaKnown RBP10.46□□□□□ -0.73
PRIM1-203ENST00000548173 NARFQ9UHQ1 456 aa10.46□□□□□ -0.73
PRIM1-203ENST00000548173 COL15A1P39059 1388 aa10.46□□□□□ -0.74
PRIM1-203ENST00000548173 ZPR1O75312 459 aa10.45□□□□□ -0.74
PRIM1-203ENST00000548173 SNRPA1P09661 255 aaKnown RBP10.45□□□□□ -0.74
PRIM1-203ENST00000548173 TM4SF1P30408 202 aa10.45□□□□□ -0.74
PRIM1-203ENST00000548173 TMPOP42166 694 aaKnown RBP10.45□□□□□ -0.74
PRIM1-203ENST00000548173 WDR43Q15061 677 aaKnown RBP eCLIP10.45□□□□□ -0.74
PRIM1-203ENST00000548173 USPL1Q5W0Q7 1092 aa10.45□□□□□ -0.74
PRIM1-203ENST00000548173 MIS18AQ9NYP9 233 aa10.45□□□□□ -0.74
PRIM1-203ENST00000548173 ADAMTS8Q9UP79 889 aa10.45□□□□□ -0.74
PRIM1-203ENST00000548173 USP16Q9Y5T5 823 aa10.45□□□□□ -0.74
PRIM1-203ENST00000548173 PRAMEF22A3QJZ6 481 aa10.44□□□□□ -0.74
PRIM1-203ENST00000548173 A1BGP04217 495 aa10.44□□□□□ -0.74
PRIM1-203ENST00000548173 YBX3P16989 372 aaKnown RBP eCLIP10.44□□□□□ -0.741e-7■□□□□ 8.1
PRIM1-203ENST00000548173 YY1P25490 414 aa10.44□□□□□ -0.74
PRIM1-203ENST00000548173 IL6STP40189 918 aaPredicted RBP10.44□□□□□ -0.74
PRIM1-203ENST00000548173 RIPK4P57078 832 aa10.44□□□□□ -0.74
PRIM1-203ENST00000548173 DDR1Q08345 913 aa10.44□□□□□ -0.74
PRIM1-203ENST00000548173 PNISRQ8TF01 805 aaKnown RBP10.44□□□□□ -0.74
PRIM1-203ENST00000548173 BCL2L12Q9HB09 334 aa10.44□□□□□ -0.74
PRIM1-203ENST00000548173 PARP3Q9Y6F1 533 aa10.44□□□□□ -0.74
PRIM1-203ENST00000548173 C10orf71Q711Q0 1435 aa10.43□□□□□ -0.74
PRIM1-203ENST00000548173 KIF13BQ9NQT8 1826 aa10.43□□□□□ -0.74
PRIM1-203ENST00000548173 A0A087WZG4 1122 aa10.43□□□□□ -0.74
PRIM1-203ENST00000548173 POLA2Q14181 598 aa10.43□□□□□ -0.74
PRIM1-203ENST00000548173 CCDC146Q8IYE0 955 aa10.43□□□□□ -0.74
PRIM1-203ENST00000548173 PELP1Q8IZL8 1130 aaKnown RBP10.43□□□□□ -0.74
PRIM1-203ENST00000548173 RUNDC1Q96C34 613 aa10.43□□□□□ -0.74
PRIM1-203ENST00000548173 POLRMTO00411 1230 aaKnown RBP10.42□□□□□ -0.74
PRIM1-203ENST00000548173 EIF4A1P60842 406 aaKnown RBP10.42□□□□□ -0.74
PRIM1-203ENST00000548173 TGFB2P61812 414 aa10.42□□□□□ -0.74
PRIM1-203ENST00000548173 LMOD3Q0VAK6 560 aa10.42□□□□□ -0.74
PRIM1-203ENST00000548173 NFIXQ14938 502 aa10.42□□□□□ -0.74
PRIM1-203ENST00000548173 TBC1D2BQ9UPU7 963 aa10.42□□□□□ -0.74
PRIM1-203ENST00000548173 RRP7AQ9Y3A4 280 aaKnown RBP10.42□□□□□ -0.74
PRIM1-203ENST00000548173 PXDNLA1KZ92 1463 aa10.42□□□□□ -0.74
PRIM1-203ENST00000548173 KDM3BQ7LBC6 1761 aa10.42□□□□□ -0.74
PRIM1-203ENST00000548173 CHD4Q14839 1912 aa10.41□□□□□ -0.74
PRIM1-203ENST00000548173 NBPF26B4DH59 902 aa10.41□□□□□ -0.74
PRIM1-203ENST00000548173 GRIN3BO60391 1043 aa10.41□□□□□ -0.74
PRIM1-203ENST00000548173 GIGYF1O75420 1035 aaPredicted RBP10.41□□□□□ -0.74
PRIM1-203ENST00000548173 PIP4K2AP48426 406 aaPredicted RBP10.41□□□□□ -0.74
PRIM1-203ENST00000548173 NEUROD2Q15784 382 aa10.41□□□□□ -0.74
PRIM1-203ENST00000548173 NBPF10Q6P3W6 841 aaKnown RBP10.41□□□□□ -0.74
PRIM1-203ENST00000548173 NBPF15Q8N660 670 aa10.41□□□□□ -0.74
PRIM1-203ENST00000548173 ZNF330Q9Y3S2 320 aaPredicted RBP10.41□□□□□ -0.74
PRIM1-203ENST00000548173 KIAA1551Q9HCM1 1747 aa10.41□□□□□ -0.74
PRIM1-203ENST00000548173 A0A0G2JLW4 131 aa10.4□□□□□ -0.74
PRIM1-203ENST00000548173 CAMTA2O94983 1202 aa10.4□□□□□ -0.74
PRIM1-203ENST00000548173 CCDC184Q52MB2 194 aa10.4□□□□□ -0.74
PRIM1-203ENST00000548173 NPM2Q86SE8 214 aaKnown RBP10.4□□□□□ -0.74
PRIM1-203ENST00000548173 BABAM1Q9NWV8 329 aa10.4□□□□□ -0.74
PRIM1-203ENST00000548173 WWC3Q9ULE0 1092 aa10.4□□□□□ -0.74
PRIM1-203ENST00000548173 TRIM35Q9UPQ4 493 aa10.4□□□□□ -0.74
PRIM1-203ENST00000548173 SERPINB2P05120 415 aa10.39□□□□□ -0.75
PRIM1-203ENST00000548173 DPEP1P16444 411 aa10.39□□□□□ -0.75
PRIM1-203ENST00000548173 KCNA3P22001 575 aa10.39□□□□□ -0.75
PRIM1-203ENST00000548173 TBC1D9BQ66K14 1250 aa10.39□□□□□ -0.75
PRIM1-203ENST00000548173 DZIP3Q86Y13 1208 aaKnown RBP10.39□□□□□ -0.75
PRIM1-203ENST00000548173 TSPYL4Q9UJ04 414 aa10.39□□□□□ -0.75
PRIM1-203ENST00000548173 SCN7AQ01118 1682 aa10.38□□□□□ -0.75
PRIM1-203ENST00000548173 AFDNP55196 1824 aaKnown RBP10.38□□□□□ -0.75
PRIM1-203ENST00000548173 BICDL1Q6ZP65 573 aa10.38□□□□□ -0.75
PRIM1-203ENST00000548173 LAMB4A4D0S4 1761 aa10.38□□□□□ -0.75
PRIM1-203ENST00000548173 N4BP2Q86UW6 1770 aaPredicted RBP10.38□□□□□ -0.75
PRIM1-203ENST00000548173 NRXN2Q9P2S2 1712 aa10.38□□□□□ -0.75
PRIM1-203ENST00000548173 CHL1O00533 1208 aa10.37□□□□□ -0.75
PRIM1-203ENST00000548173 APAF1O14727 1248 aa10.37□□□□□ -0.75
PRIM1-203ENST00000548173 ANP32CO43423 234 aa10.37□□□□□ -0.75
PRIM1-203ENST00000548173 CLEC4GQ6UXB4 293 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms