RNA–Protein interactions for RNA: ENST00000547853.1

CDK4-205, Transcript of cyclin dependent kinase 4, humanhuman

TSL 3

Gene CDK4, Length 228 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-205ENST00000547853 THSD7BQ9C0I4 1608 aa12.95□□□□□ -0.34
CDK4-205ENST00000547853 ARFGEF2Q9Y6D5 1785 aa12.95□□□□□ -0.34
CDK4-205ENST00000547853 CHRNA5P30532 468 aa12.95□□□□□ -0.34
CDK4-205ENST00000547853 SCN11AQ9UI33 1791 aa12.94□□□□□ -0.34
CDK4-205ENST00000547853 RNF123Q5XPI4 1314 aa12.94□□□□□ -0.34
CDK4-205ENST00000547853 PHKG2P15735 406 aa12.94□□□□□ -0.34
CDK4-205ENST00000547853 RC3H1Q5TC82 1133 aaKnown RBP12.94□□□□□ -0.34
CDK4-205ENST00000547853 SPG7Q9UQ90 795 aa12.94□□□□□ -0.34
CDK4-205ENST00000547853 USP42Q9H9J4 1324 aaKnown RBP12.93□□□□□ -0.34
CDK4-205ENST00000547853 GLTPD2A6NH11 291 aa12.93□□□□□ -0.34
CDK4-205ENST00000547853 FOXN1O15353 648 aa12.93□□□□□ -0.34
CDK4-205ENST00000547853 VEGFAP15692 232 aaPredicted RBP12.93□□□□□ -0.34
CDK4-205ENST00000547853 RFC4P35249 363 aa12.93□□□□□ -0.34
CDK4-205ENST00000547853 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.93□□□□□ -0.34
CDK4-205ENST00000547853 ADAMTSL1Q8N6G6 1762 aa12.92□□□□□ -0.34
CDK4-205ENST00000547853 RPS6KA4O75676 772 aa12.92□□□□□ -0.34
CDK4-205ENST00000547853 FAM9BQ8IZU0 186 aa12.92□□□□□ -0.34
CDK4-205ENST00000547853 SRP68Q9UHB9 627 aaKnown RBP12.92□□□□□ -0.34
CDK4-205ENST00000547853 NUDCQ9Y266 331 aa12.92□□□□□ -0.34
CDK4-205ENST00000547853 EMILIN1Q9Y6C2 1016 aa12.92□□□□□ -0.34
CDK4-205ENST00000547853 SCN7AQ01118 1682 aa12.92□□□□□ -0.34
CDK4-205ENST00000547853 CNTNAP1P78357 1384 aa12.92□□□□□ -0.34
CDK4-205ENST00000547853 SCN4AP35499 1836 aa12.91□□□□□ -0.34
CDK4-205ENST00000547853 POTECB2RU33 542 aa12.91□□□□□ -0.34
CDK4-205ENST00000547853 LMNB1P20700 586 aa12.91□□□□□ -0.34
CDK4-205ENST00000547853 PRDM10Q9NQV6 1147 aa12.91□□□□□ -0.34
CDK4-205ENST00000547853 TNRC18O15417 2968 aaPredicted RBP12.9□□□□□ -0.34
CDK4-205ENST00000547853 POLRMTO00411 1230 aaKnown RBP12.9□□□□□ -0.34
CDK4-205ENST00000547853 IFNL2Q8IZJ0 200 aa12.9□□□□□ -0.34
CDK4-205ENST00000547853 CREBZFQ9NS37 354 aa12.9□□□□□ -0.34
CDK4-205ENST00000547853 MKRN1Q9UHC7 482 aaKnown RBP12.9□□□□□ -0.34
CDK4-205ENST00000547853 NFKBIEO00221 500 aa12.89□□□□□ -0.35
CDK4-205ENST00000547853 RALBP1Q15311 655 aa12.89□□□□□ -0.35
CDK4-205ENST00000547853 FAM161AQ3B820 660 aa12.89□□□□□ -0.35
CDK4-205ENST00000547853 PDE4DIPQ5VU43 2346 aa12.88□□□□□ -0.35
CDK4-205ENST00000547853 EYA1Q99502 592 aa12.88□□□□□ -0.35
CDK4-205ENST00000547853 RBM42Q9BTD8 480 aaKnown RBP12.88□□□□□ -0.35
CDK4-205ENST00000547853 CARMIL3Q8ND23 1372 aa12.88□□□□□ -0.35
CDK4-205ENST00000547853 UBR2Q8IWV8 1755 aa12.88□□□□□ -0.35
CDK4-205ENST00000547853 CRKLP46109 303 aaKnown RBP12.87□□□□□ -0.35
CDK4-205ENST00000547853 PCDH10Q9P2E7 1040 aa12.87□□□□□ -0.35
CDK4-205ENST00000547853 ST20-MTHFSA0A0A6YYL1 179 aa12.86□□□□□ -0.35
CDK4-205ENST00000547853 ERVV-2B6SEH9 535 aa12.86□□□□□ -0.35
CDK4-205ENST00000547853 CCDC184Q52MB2 194 aa12.86□□□□□ -0.35
CDK4-205ENST00000547853 PASKQ96RG2 1323 aa12.86□□□□□ -0.35
CDK4-205ENST00000547853 MRC1P22897 1456 aa12.85□□□□□ -0.35
CDK4-205ENST00000547853 LTBP1Q14766 1721 aa12.85□□□□□ -0.35
CDK4-205ENST00000547853 POTEIP0CG38 1075 aa12.85□□□□□ -0.35
CDK4-205ENST00000547853 POTEJP0CG39 1038 aa12.85□□□□□ -0.35
CDK4-205ENST00000547853 TM4SF1P30408 202 aa12.85□□□□□ -0.35
CDK4-205ENST00000547853 CTCFP49711 727 aaPredicted RBP12.85□□□□□ -0.35
CDK4-205ENST00000547853 SLX4Q8IY92 1834 aa12.84□□□□□ -0.35
CDK4-205ENST00000547853 CHADLQ6NUI6 762 aa12.84□□□□□ -0.35
CDK4-205ENST00000547853 ABHD8Q96I13 439 aa12.84□□□□□ -0.35
CDK4-205ENST00000547853 MYBBP1AQ9BQG0 1328 aaKnown RBP12.84□□□□□ -0.35
CDK4-205ENST00000547853 BCORQ6W2J9 1755 aa12.84□□□□□ -0.35
CDK4-205ENST00000547853 IRX6P78412 446 aaPredicted RBP12.83□□□□□ -0.36
CDK4-205ENST00000547853 SOS1Q07889 1333 aaPredicted RBP12.83□□□□□ -0.36
CDK4-205ENST00000547853 INTS5Q6P9B9 1019 aaKnown RBP12.82□□□□□ -0.36
CDK4-205ENST00000547853 PNISRQ8TF01 805 aaKnown RBP12.82□□□□□ -0.36
CDK4-205ENST00000547853 AIDAQ96BJ3 306 aa12.82□□□□□ -0.36
CDK4-205ENST00000547853 COL15A1P39059 1388 aa12.81□□□□□ -0.36
CDK4-205ENST00000547853 PPM1GO15355 546 aaPredicted RBP12.81□□□□□ -0.36
CDK4-205ENST00000547853 PTCD1O75127 700 aaKnown RBP12.81□□□□□ -0.36
CDK4-205ENST00000547853 HSPA8P11142 646 aaKnown RBP12.81□□□□□ -0.36
CDK4-205ENST00000547853 VEGFBP49765 207 aa12.81□□□□□ -0.36
CDK4-205ENST00000547853 LBX1P52954 281 aa12.81□□□□□ -0.36
CDK4-205ENST00000547853 NFIXQ14938 502 aa12.81□□□□□ -0.36
CDK4-205ENST00000547853 USPL1Q5W0Q7 1092 aa12.81□□□□□ -0.36
CDK4-205ENST00000547853 TTLL6Q8N841 843 aa12.81□□□□□ -0.36
CDK4-205ENST00000547853 CARD14Q9BXL6 1004 aa12.81□□□□□ -0.36
CDK4-205ENST00000547853 WBP1LQ9NX94 342 aa12.81□□□□□ -0.36
CDK4-205ENST00000547853 HSP90AB1P08238 724 aaKnown RBP12.8□□□□□ -0.36
CDK4-205ENST00000547853 EIF4A2Q14240 407 aaKnown RBP12.8□□□□□ -0.36
CDK4-205ENST00000547853 TRPM7Q96QT4 1865 aa12.8□□□□□ -0.36
CDK4-205ENST00000547853 B4GALNT3Q6L9W6 998 aa12.79□□□□□ -0.36
CDK4-205ENST00000547853 C2CD5Q86YS7 1000 aa12.79□□□□□ -0.36
CDK4-205ENST00000547853 CCDC136Q96JN2 1154 aa12.79□□□□□ -0.36
CDK4-205ENST00000547853 BCL11AQ9H165 835 aa12.79□□□□□ -0.36
CDK4-205ENST00000547853 LTBP3Q9NS15 1303 aa12.79□□□□□ -0.36
CDK4-205ENST00000547853 SLC24A1O60721 1099 aa12.78□□□□□ -0.36
CDK4-205ENST00000547853 ANP32AP39687 249 aaKnown RBP12.78□□□□□ -0.36
CDK4-205ENST00000547853 CABP4P57796 275 aa12.78□□□□□ -0.36
CDK4-205ENST00000547853 ERFEQ4G0M1 354 aa12.78□□□□□ -0.36
CDK4-205ENST00000547853 DPY19L2Q6NUT2 758 aa12.78□□□□□ -0.36
CDK4-205ENST00000547853 ZNF530Q6P9A1 599 aaPredicted RBP12.78□□□□□ -0.36
CDK4-205ENST00000547853 BCL2L12Q9HB09 334 aa12.78□□□□□ -0.36
CDK4-205ENST00000547853 POLKQ9UBT6 870 aa12.78□□□□□ -0.36
CDK4-205ENST00000547853 NOP58Q9Y2X3 529 aaKnown RBP12.78□□□□□ -0.36
CDK4-205ENST00000547853 ZPR1O75312 459 aa12.77□□□□□ -0.37
CDK4-205ENST00000547853 RGS19P49795 217 aa12.77□□□□□ -0.37
CDK4-205ENST00000547853 MLLT1Q03111 559 aaPredicted RBP12.77□□□□□ -0.37
CDK4-205ENST00000547853 LDHDQ86WU2 507 aa12.77□□□□□ -0.37
CDK4-205ENST00000547853 NARFQ9UHQ1 456 aa12.77□□□□□ -0.37
CDK4-205ENST00000547853 SIPA1L3O60292 1781 aaPredicted RBP12.76□□□□□ -0.37
CDK4-205ENST00000547853 TMEM88BA6NKF7 163 aa12.76□□□□□ -0.37
CDK4-205ENST00000547853 DDNO94850 711 aaPredicted RBP12.76□□□□□ -0.37
CDK4-205ENST00000547853 DNAJC10Q8IXB1 793 aa12.76□□□□□ -0.37
CDK4-205ENST00000547853 L3MBTL3Q96JM7 780 aaPredicted RBP12.76□□□□□ -0.37
CDK4-205ENST00000547853 RASSF10A6NK89 507 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms