RNA–Protein interactions for RNA: ENST00000547752.5

PTPRR-206, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

TSL 2

Gene PTPRR, Length 1,729 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-206ENST00000547752 C8orf58Q8NAV2 365 aa12.52□□□□□ -0.41
PTPRR-206ENST00000547752 USP16Q9Y5T5 823 aa12.52□□□□□ -0.41
PTPRR-206ENST00000547752 NUP188Q5SRE5 1749 aa12.52□□□□□ -0.41
PTPRR-206ENST00000547752 CICQ96RK0 1608 aaPredicted RBP12.52□□□□□ -0.41
PTPRR-206ENST00000547752 E9PSI1 815 aa12.51□□□□□ -0.41
PTPRR-206ENST00000547752 CYP19A1P11511 503 aaPredicted RBP12.51□□□□□ -0.41
PTPRR-206ENST00000547752 ANO8Q9HCE9 1232 aaPredicted RBP12.51□□□□□ -0.41
PTPRR-206ENST00000547752 ZNF827Q17R98 1081 aa12.51□□□□□ -0.41
PTPRR-206ENST00000547752 TSPYL6Q8N831 410 aa12.51□□□□□ -0.41
PTPRR-206ENST00000547752 AKT1S1Q96B36 256 aa12.51□□□□□ -0.41
PTPRR-206ENST00000547752 MYH16Q9H6N6 1097 aa12.51□□□□□ -0.41
PTPRR-206ENST00000547752 TAF1LQ8IZX4 1826 aa12.5□□□□□ -0.41
PTPRR-206ENST00000547752 C5P01031 1676 aa12.5□□□□□ -0.41
PTPRR-206ENST00000547752 EXOSC9Q06265 439 aaKnown RBP12.5□□□□□ -0.41
PTPRR-206ENST00000547752 DUSP27Q5VZP5 1158 aa12.5□□□□□ -0.41
PTPRR-206ENST00000547752 INTS5Q6P9B9 1019 aaKnown RBP12.5□□□□□ -0.41
PTPRR-206ENST00000547752 YTHDC1Q96MU7 727 aaKnown RBP12.5□□□□□ -0.41
PTPRR-206ENST00000547752 CRKLP46109 303 aaKnown RBP12.49□□□□□ -0.41
PTPRR-206ENST00000547752 TEX13AQ9BXU3 409 aaPredicted RBP12.49□□□□□ -0.41
PTPRR-206ENST00000547752 CNTNAP4Q9C0A0 1308 aa12.49□□□□□ -0.41
PTPRR-206ENST00000547752 COL5A3P25940 1745 aaPredicted RBP12.49□□□□□ -0.41
PTPRR-206ENST00000547752 ELL2O00472 640 aaPredicted RBP12.48□□□□□ -0.41
PTPRR-206ENST00000547752 A1BGP04217 495 aa12.48□□□□□ -0.41
PTPRR-206ENST00000547752 RC3H1Q5TC82 1133 aaKnown RBP12.48□□□□□ -0.41
PTPRR-206ENST00000547752 CHRDL2Q6WN34 429 aa12.48□□□□□ -0.41
PTPRR-206ENST00000547752 SMIM5Q71RC9 77 aa12.48□□□□□ -0.41
PTPRR-206ENST00000547752 AMIGO3Q86WK7 504 aa12.48□□□□□ -0.41
PTPRR-206ENST00000547752 C4BP0C0L5 1744 aa12.48□□□□□ -0.41
PTPRR-206ENST00000547752 MYH14Q7Z406 1995 aaKnown RBP12.47□□□□□ -0.41
PTPRR-206ENST00000547752 NBPF26B4DH59 902 aa12.47□□□□□ -0.41
PTPRR-206ENST00000547752 VAMP4O75379 141 aa12.47□□□□□ -0.41
PTPRR-206ENST00000547752 STARD3NLO95772 234 aa12.47□□□□□ -0.41
PTPRR-206ENST00000547752 HOXB7P09629 217 aa12.47□□□□□ -0.41
PTPRR-206ENST00000547752 SLC15A2Q16348 729 aa12.47□□□□□ -0.41
PTPRR-206ENST00000547752 NBPF14Q5TI25 921 aa12.47□□□□□ -0.41
PTPRR-206ENST00000547752 NBPF10Q6P3W6 841 aaKnown RBP12.47□□□□□ -0.41
PTPRR-206ENST00000547752 NBPF15Q8N660 670 aa12.47□□□□□ -0.41
PTPRR-206ENST00000547752 CCDC87Q9NVE4 849 aa12.47□□□□□ -0.41
PTPRR-206ENST00000547752 ZBTB1Q9Y2K1 713 aa12.47□□□□□ -0.41
PTPRR-206ENST00000547752 EIF2S2P20042 333 aaKnown RBP12.46□□□□□ -0.41
PTPRR-206ENST00000547752 PIP4K2AP48426 406 aaPredicted RBP12.46□□□□□ -0.41
PTPRR-206ENST00000547752 PDIA6Q15084 440 aa12.46□□□□□ -0.41
PTPRR-206ENST00000547752 TWISTNBQ3B726 338 aaPredicted RBP12.46□□□□□ -0.41
PTPRR-206ENST00000547752 STK32BQ9NY57 414 aa12.46□□□□□ -0.41
PTPRR-206ENST00000547752 LAMB4A4D0S4 1761 aa12.46□□□□□ -0.42
PTPRR-206ENST00000547752 RPS6KA4O75676 772 aa12.45□□□□□ -0.42
PTPRR-206ENST00000547752 NECTIN2Q92692 538 aa12.45□□□□□ -0.42
PTPRR-206ENST00000547752 GNPATO15228 680 aa12.45□□□□□ -0.42
PTPRR-206ENST00000547752 CANXP27824 592 aaKnown RBP12.45□□□□□ -0.42
PTPRR-206ENST00000547752 AK7Q96M32 723 aa12.45□□□□□ -0.42
PTPRR-206ENST00000547752 SOS1Q07889 1333 aaPredicted RBP12.45□□□□□ -0.42
PTPRR-206ENST00000547752 HMGB2P26583 209 aaKnown RBP12.44□□□□□ -0.42
PTPRR-206ENST00000547752 PROSER3Q2NL68 480 aa12.44□□□□□ -0.42
PTPRR-206ENST00000547752 HDGFL1Q5TGJ6 251 aa12.44□□□□□ -0.42
PTPRR-206ENST00000547752 PNPLA7Q6ZV29 1317 aa12.44□□□□□ -0.42
PTPRR-206ENST00000547752 LRP10Q7Z4F1 713 aa12.44□□□□□ -0.42
PTPRR-206ENST00000547752 TCERG1O14776 1098 aaKnown RBP12.43□□□□□ -0.42
PTPRR-206ENST00000547752 ANXA1P04083 346 aa12.43□□□□□ -0.42
PTPRR-206ENST00000547752 EIF5P55010 431 aaKnown RBP12.43□□□□□ -0.42
PTPRR-206ENST00000547752 TFCP2L1Q9NZI6 479 aa12.43□□□□□ -0.42
PTPRR-206ENST00000547752 UBR3Q6ZT12 1888 aa12.43□□□□□ -0.42
PTPRR-206ENST00000547752 TUBGCP6Q96RT7 1819 aa12.43□□□□□ -0.42
PTPRR-206ENST00000547752 ERBB4Q15303 1308 aa12.43□□□□□ -0.42
PTPRR-206ENST00000547752 R3HDM1Q15032 1099 aaKnown RBP12.42□□□□□ -0.42
PTPRR-206ENST00000547752 COL23A1Q86Y22 540 aaPredicted RBP12.42□□□□□ -0.42
PTPRR-206ENST00000547752 PDGFDQ9GZP0 370 aaPredicted RBP12.42□□□□□ -0.42
PTPRR-206ENST00000547752 PLSCR2Q9NRY7 297 aa12.42□□□□□ -0.42
PTPRR-206ENST00000547752 CHPF2Q9P2E5 772 aa12.42□□□□□ -0.42
PTPRR-206ENST00000547752 RTCBQ9Y3I0 505 aaKnown RBP12.42□□□□□ -0.42
PTPRR-206ENST00000547752 PHF14O94880 888 aa12.42□□□□□ -0.42
PTPRR-206ENST00000547752 IL6STP40189 918 aaPredicted RBP12.42□□□□□ -0.42
PTPRR-206ENST00000547752 ARHGEF1Q92888 912 aaKnown RBP12.42□□□□□ -0.42
PTPRR-206ENST00000547752 DDX21Q9NR30 783 aaKnown RBP eCLIP12.42□□□□□ -0.42
PTPRR-206ENST00000547752 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.41□□□□□ -0.42
PTPRR-206ENST00000547752 PSDA5PKW4 1024 aaPredicted RBP12.41□□□□□ -0.42
PTPRR-206ENST00000547752 MYL6BP14649 208 aa12.41□□□□□ -0.42
PTPRR-206ENST00000547752 SSFA2P28290 1259 aa12.41□□□□□ -0.42
PTPRR-206ENST00000547752 CCDC30Q5VVM6 783 aa12.41□□□□□ -0.42
PTPRR-206ENST00000547752 TRAPPC3LQ5T215 181 aa12.4□□□□□ -0.42
PTPRR-206ENST00000547752 COL15A1P39059 1388 aa12.4□□□□□ -0.42
PTPRR-206ENST00000547752 QSER1Q2KHR3 1735 aa12.4□□□□□ -0.43
PTPRR-206ENST00000547752 TTLL7Q6ZT98 887 aa12.4□□□□□ -0.43
PTPRR-206ENST00000547752 DBF4Q9UBU7 674 aaPredicted RBP12.4□□□□□ -0.43
PTPRR-206ENST00000547752 CT47B1P0C2W7 299 aaPredicted RBP12.39□□□□□ -0.43
PTPRR-206ENST00000547752 G2E3Q7L622 706 aa12.39□□□□□ -0.43
PTPRR-206ENST00000547752 FLAD1Q8NFF5 587 aa12.39□□□□□ -0.43
PTPRR-206ENST00000547752 PHAXQ9H814 394 aaKnown RBP12.39□□□□□ -0.43
PTPRR-206ENST00000547752 SRP68Q9UHB9 627 aaKnown RBP12.39□□□□□ -0.43
PTPRR-206ENST00000547752 ZNF330Q9Y3S2 320 aaPredicted RBP12.39□□□□□ -0.43
PTPRR-206ENST00000547752 MRPL50Q8N5N7 158 aaKnown RBP12.38□□□□□ -0.43
PTPRR-206ENST00000547752 XAGE3Q8WTP9 111 aa12.38□□□□□ -0.43
PTPRR-206ENST00000547752 SSH1Q8WYL5 1049 aa12.38□□□□□ -0.43
PTPRR-206ENST00000547752 BCL2L12Q9HB09 334 aa12.38□□□□□ -0.43
PTPRR-206ENST00000547752 HYPKQ9NX55 129 aa12.38□□□□□ -0.43
PTPRR-206ENST00000547752 TBC1D2BQ9UPU7 963 aa12.38□□□□□ -0.43
PTPRR-206ENST00000547752 A0A087WZG4 1122 aa12.37□□□□□ -0.43
PTPRR-206ENST00000547752 CAMTA2O94983 1202 aa12.37□□□□□ -0.43
PTPRR-206ENST00000547752 SLC4A2P04920 1241 aa12.37□□□□□ -0.43
PTPRR-206ENST00000547752 RARSP54136 660 aaKnown RBP12.37□□□□□ -0.43
PTPRR-206ENST00000547752 COPS6Q7L5N1 327 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms