RNA–Protein interactions for RNA: ENST00000546849.1

NPAS3-204, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 3

Gene NPAS3, Length 464 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-204ENST00000546849 BMP1P13497 986 aa10.82□□□□□ -0.68
NPAS3-204ENST00000546849 EPHA4P54764 986 aa10.82□□□□□ -0.68
NPAS3-204ENST00000546849 MTFR1Q15390 333 aa10.82□□□□□ -0.68
NPAS3-204ENST00000546849 NIFKQ9BYG3 293 aaKnown RBP10.82□□□□□ -0.68
NPAS3-204ENST00000546849 ABL1P00519 1130 aa10.81□□□□□ -0.68
NPAS3-204ENST00000546849 FKBP5Q13451 457 aaPredicted RBP10.81□□□□□ -0.68
NPAS3-204ENST00000546849 PURBQ96QR8 312 aaKnown RBP10.81□□□□□ -0.68
NPAS3-204ENST00000546849 FOXK2Q01167 660 aa10.8□□□□□ -0.68
NPAS3-204ENST00000546849 PHLDB3Q6NSJ2 640 aa10.8□□□□□ -0.68
NPAS3-204ENST00000546849 RHBDD1Q8TEB9 315 aa10.8□□□□□ -0.68
NPAS3-204ENST00000546849 GNEQ9Y223 722 aaKnown RBP10.8□□□□□ -0.68
NPAS3-204ENST00000546849 SERTM1A2A2V5 107 aa10.79□□□□□ -0.68
NPAS3-204ENST00000546849 RNF144AP50876 292 aaPredicted RBP10.79□□□□□ -0.68
NPAS3-204ENST00000546849 PPARGC1BQ86YN6 1023 aaKnown RBP10.79□□□□□ -0.68
NPAS3-204ENST00000546849 FHDC1Q9C0D6 1143 aaPredicted RBP10.79□□□□□ -0.68
NPAS3-204ENST00000546849 CTSOP43234 321 aaPredicted RBP10.78□□□□□ -0.68
NPAS3-204ENST00000546849 TMCO4Q5TGY1 634 aa10.78□□□□□ -0.68
NPAS3-204ENST00000546849 TAS1R3Q7RTX0 852 aa10.78□□□□□ -0.68
NPAS3-204ENST00000546849 HRH3Q9Y5N1 445 aa10.78□□□□□ -0.68
NPAS3-204ENST00000546849 TTLL8A6PVC2 850 aa10.77□□□□□ -0.69
NPAS3-204ENST00000546849 C21orf2O43822 256 aa10.77□□□□□ -0.69
NPAS3-204ENST00000546849 PLA2G4AP47712 749 aa10.77□□□□□ -0.69
NPAS3-204ENST00000546849 TXNDC2Q86VQ3 553 aa10.77□□□□□ -0.69
NPAS3-204ENST00000546849 NGLY1Q96IV0 654 aa10.77□□□□□ -0.69
NPAS3-204ENST00000546849 SCNN1AP37088 669 aa10.76□□□□□ -0.69
NPAS3-204ENST00000546849 SERPINB4P48594 390 aa10.76□□□□□ -0.69
NPAS3-204ENST00000546849 NAA30Q147X3 362 aaPredicted RBP10.76□□□□□ -0.69
NPAS3-204ENST00000546849 TEAD4Q15561 434 aa10.76□□□□□ -0.69
NPAS3-204ENST00000546849 NBPF1Q3BBV0 1214 aa10.76□□□□□ -0.69
NPAS3-204ENST00000546849 LYSMD3Q7Z3D4 306 aa10.76□□□□□ -0.69
NPAS3-204ENST00000546849 STAG2Q8N3U4 1231 aa10.76□□□□□ -0.69
NPAS3-204ENST00000546849 COL26A1Q96A83 441 aa10.76□□□□□ -0.69
NPAS3-204ENST00000546849 IQSEC3Q9UPP2 1182 aaPredicted RBP10.76□□□□□ -0.69
NPAS3-204ENST00000546849 CCDC9Q9Y3X0 531 aaKnown RBP10.76□□□□□ -0.69
NPAS3-204ENST00000546849 USP3Q9Y6I4 520 aa10.76□□□□□ -0.69
NPAS3-204ENST00000546849 NOS2P35228 1153 aa10.75□□□□□ -0.69
NPAS3-204ENST00000546849 FOXD4L5Q5VV16 416 aaPredicted RBP10.75□□□□□ -0.69
NPAS3-204ENST00000546849 PRICKLE2Q7Z3G6 844 aa10.75□□□□□ -0.69
NPAS3-204ENST00000546849 L3MBTL2Q969R5 705 aa10.75□□□□□ -0.69
NPAS3-204ENST00000546849 AIDAQ96BJ3 306 aa10.75□□□□□ -0.69
NPAS3-204ENST00000546849 C2orf49Q9BVC5 232 aaPredicted RBP10.75□□□□□ -0.69
NPAS3-204ENST00000546849 GRIP2Q9C0E4 1043 aa10.75□□□□□ -0.69
NPAS3-204ENST00000546849 BIN2Q9UBW5 565 aaPredicted RBP10.75□□□□□ -0.69
NPAS3-204ENST00000546849 PARP3Q9Y6F1 533 aa10.75□□□□□ -0.69
NPAS3-204ENST00000546849 ZNF211Q13398 564 aaPredicted RBP10.74□□□□□ -0.69
NPAS3-204ENST00000546849 RNF217Q8TC41 542 aa10.74□□□□□ -0.69
NPAS3-204ENST00000546849 GTF3C2Q8WUA4 911 aaPredicted RBP10.74□□□□□ -0.69
NPAS3-204ENST00000546849 ZFP42Q96MM3 310 aa10.74□□□□□ -0.69
NPAS3-204ENST00000546849 NXF1Q9UBU9 619 aaKnown RBP10.74□□□□□ -0.69
NPAS3-204ENST00000546849 SEPT3Q9UH03 358 aa10.74□□□□□ -0.69
NPAS3-204ENST00000546849 FIGNL2A6NMB9 653 aa10.73□□□□□ -0.69
NPAS3-204ENST00000546849 TATP17735 454 aaPredicted RBP10.73□□□□□ -0.69
NPAS3-204ENST00000546849 PHKA2P46019 1235 aa10.73□□□□□ -0.69
NPAS3-204ENST00000546849 GLYCTKQ8IVS8 523 aa10.73□□□□□ -0.69
NPAS3-204ENST00000546849 H3BRB1 525 aa10.72□□□□□ -0.69
NPAS3-204ENST00000546849 INSM1Q01101 510 aaPredicted RBP10.72□□□□□ -0.69
NPAS3-204ENST00000546849 C4orf17Q53FE4 359 aa10.72□□□□□ -0.69
NPAS3-204ENST00000546849 C16orf46Q6P387 395 aa10.72□□□□□ -0.69
NPAS3-204ENST00000546849 TUT1Q9H6E5 874 aaKnown RBP10.72□□□□□ -0.69
NPAS3-204ENST00000546849 ANO2Q9NQ90 1003 aa10.72□□□□□ -0.69
NPAS3-204ENST00000546849 EGFL7Q9UHF1 273 aa10.72□□□□□ -0.69
NPAS3-204ENST00000546849 HCN4Q9Y3Q4 1203 aa10.72□□□□□ -0.69
NPAS3-204ENST00000546849 EML1O00423 815 aa10.71□□□□□ -0.69
NPAS3-204ENST00000546849 MAN1A2O60476 641 aa10.71□□□□□ -0.69
NPAS3-204ENST00000546849 POU4F2Q12837 409 aa10.71□□□□□ -0.69
NPAS3-204ENST00000546849 SND1Q7KZF4 910 aaKnown RBP eCLIP10.71□□□□□ -0.69
NPAS3-204ENST00000546849 SPATA31C2B4DYI2 1134 aa10.7□□□□□ -0.7
NPAS3-204ENST00000546849 RHOQP17081 205 aa10.7□□□□□ -0.7
NPAS3-204ENST00000546849 SF3B2Q13435 895 aaKnown RBP10.7□□□□□ -0.7
NPAS3-204ENST00000546849 NBPF10Q6P3W6 841 aaKnown RBP10.7□□□□□ -0.7
NPAS3-204ENST00000546849 ZDHHC1Q8WTX9 485 aa10.7□□□□□ -0.7
NPAS3-204ENST00000546849 PHACTR1Q9C0D0 580 aa10.7□□□□□ -0.7
NPAS3-204ENST00000546849 TIMMDC1Q9NPL8 285 aa10.7□□□□□ -0.7
NPAS3-204ENST00000546849 STK17AQ9UEE5 414 aa10.7□□□□□ -0.7
NPAS3-204ENST00000546849 SOS2Q07890 1332 aaPredicted RBP10.69□□□□□ -0.7
NPAS3-204ENST00000546849 SOWAHDA6NJG2 315 aa10.69□□□□□ -0.7
NPAS3-204ENST00000546849 HIRAP54198 1017 aaPredicted RBP10.69□□□□□ -0.7
NPAS3-204ENST00000546849 BICDL1Q6ZP65 573 aa10.69□□□□□ -0.7
NPAS3-204ENST00000546849 CAPN12Q6ZSI9 719 aa10.69□□□□□ -0.7
NPAS3-204ENST00000546849 NPAS3Q8IXF0 933 aa10.69□□□□□ -0.7
NPAS3-204ENST00000546849 ALDH16A1Q8IZ83 802 aa10.69□□□□□ -0.7
NPAS3-204ENST00000546849 HELQQ8TDG4 1101 aa10.69□□□□□ -0.7
NPAS3-204ENST00000546849 SLC16A10Q8TF71 515 aa10.69□□□□□ -0.7
NPAS3-204ENST00000546849 RTN1Q16799 776 aa10.68□□□□□ -0.7
NPAS3-204ENST00000546849 CCDC27Q2M243 656 aa10.68□□□□□ -0.7
NPAS3-204ENST00000546849 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.68□□□□□ -0.7
NPAS3-204ENST00000546849 SH3PXD2AQ5TCZ1 1133 aa10.68□□□□□ -0.7
NPAS3-204ENST00000546849 RHPN1Q8TCX5 695 aa10.68□□□□□ -0.7
NPAS3-204ENST00000546849 NEUROD4Q9HD90 331 aa10.68□□□□□ -0.7
NPAS3-204ENST00000546849 DNMT3AQ9Y6K1 912 aaPredicted RBP10.68□□□□□ -0.7
NPAS3-204ENST00000546849 FKBP4Q02790 459 aaKnown RBP eCLIP10.67□□□□□ -0.7
NPAS3-204ENST00000546849 AAMPQ13685 434 aa10.67□□□□□ -0.7
NPAS3-204ENST00000546849 HIF1AQ16665 826 aa10.67□□□□□ -0.7
NPAS3-204ENST00000546849 ZDHHC3Q9NYG2 299 aa10.67□□□□□ -0.7
NPAS3-204ENST00000546849 A0A1B0GTH6 734 aa10.66□□□□□ -0.7
NPAS3-204ENST00000546849 ICMTO60725 284 aa10.66□□□□□ -0.7
NPAS3-204ENST00000546849 VEGFBP49765 207 aa10.66□□□□□ -0.7
NPAS3-204ENST00000546849 MTMR3Q13615 1198 aa10.66□□□□□ -0.7
NPAS3-204ENST00000546849 WDR44Q5JSH3 913 aa10.66□□□□□ -0.7
NPAS3-204ENST00000546849 C1orf53Q5VUE5 145 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms