RNA–Protein interactions for RNA: ENST00000546519.1

SLC38A1-203, Transcript of solute carrier family 38 member 1, humanhuman

TSL 3

Gene SLC38A1, Length 309 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A1-203ENST00000546519 MCM10Q7L590 875 aa29.17■■■□□ 2.26
SLC38A1-203ENST00000546519 TMOD3Q9NYL9 352 aa29.17■■■□□ 2.26
SLC38A1-203ENST00000546519 MRC1P22897 1456 aa29.17■■■□□ 2.26
SLC38A1-203ENST00000546519 CICQ96RK0 1608 aaPredicted RBP29.16■■■□□ 2.26
SLC38A1-203ENST00000546519 DCTN1Q14203 1278 aa29.16■■■□□ 2.26
SLC38A1-203ENST00000546519 KIF3CO14782 793 aa29.15■■■□□ 2.26
SLC38A1-203ENST00000546519 ATP6V1AP38606 617 aa29.15■■■□□ 2.26
SLC38A1-203ENST00000546519 KIF13BQ9NQT8 1826 aa29.15■■■□□ 2.26
SLC38A1-203ENST00000546519 E9PSI1 815 aa29.14■■■□□ 2.26
SLC38A1-203ENST00000546519 SIPA1L3O60292 1781 aaPredicted RBP29.13■■■□□ 2.25
SLC38A1-203ENST00000546519 PXDNLA1KZ92 1463 aa29.13■■■□□ 2.25
SLC38A1-203ENST00000546519 MMP10P09238 476 aa29.13■■■□□ 2.25
SLC38A1-203ENST00000546519 THUMPD2Q9BTF0 503 aaKnown RBP29.13■■■□□ 2.25
SLC38A1-203ENST00000546519 LGR6Q9HBX8 967 aa29.13■■■□□ 2.25
SLC38A1-203ENST00000546519 IFT57Q9NWB7 429 aa29.13■■■□□ 2.25
SLC38A1-203ENST00000546519 ATG3Q9NT62 314 aa29.12■■■□□ 2.25
SLC38A1-203ENST00000546519 GNAI1P63096 354 aa29.11■■■□□ 2.25
SLC38A1-203ENST00000546519 SLFN5Q08AF3 891 aa29.11■■■□□ 2.25
SLC38A1-203ENST00000546519 BABAM1Q9NWV8 329 aa29.11■■■□□ 2.25
SLC38A1-203ENST00000546519 ERVV-2B6SEH9 535 aa29.1■■■□□ 2.25
SLC38A1-203ENST00000546519 ZNF853P0CG23 659 aa29.1■■■□□ 2.25
SLC38A1-203ENST00000546519 CFAP44Q96MT7 982 aa29.1■■■□□ 2.25
SLC38A1-203ENST00000546519 TEFQ10587 303 aa29.09■■■□□ 2.25
SLC38A1-203ENST00000546519 TRMT2AQ8IZ69 625 aaKnown RBP29.09■■■□□ 2.25
SLC38A1-203ENST00000546519 MYH16Q9H6N6 1097 aa29.09■■■□□ 2.25
SLC38A1-203ENST00000546519 TAF7Q15545 349 aaPredicted RBP29.07■■■□□ 2.24
SLC38A1-203ENST00000546519 CDCA7LQ96GN5 454 aa29.07■■■□□ 2.24
SLC38A1-203ENST00000546519 SLC4A9Q96Q91 983 aa29.07■■■□□ 2.24
SLC38A1-203ENST00000546519 SLC52A2Q9HAB3 445 aa29.07■■■□□ 2.24
SLC38A1-203ENST00000546519 SPINK5Q9NQ38 1064 aaPredicted RBP29.07■■■□□ 2.24
SLC38A1-203ENST00000546519 COL5A3P25940 1745 aaPredicted RBP29.06■■■□□ 2.24
SLC38A1-203ENST00000546519 A0A0G2JLW4 131 aa29.06■■■□□ 2.24
SLC38A1-203ENST00000546519 BCS1LQ9Y276 419 aa29.06■■■□□ 2.24
SLC38A1-203ENST00000546519 CHL1O00533 1208 aa29.05■■■□□ 2.24
SLC38A1-203ENST00000546519 KDM3BQ7LBC6 1761 aa29.04■■■□□ 2.24
SLC38A1-203ENST00000546519 C10orf71Q711Q0 1435 aa29.03■■■□□ 2.24
SLC38A1-203ENST00000546519 C4AP0C0L4 1744 aa29.03■■■□□ 2.24
SLC38A1-203ENST00000546519 CABP4P57796 275 aa29.03■■■□□ 2.24
SLC38A1-203ENST00000546519 DUSP27Q5VZP5 1158 aa29.03■■■□□ 2.24
SLC38A1-203ENST00000546519 RBM42Q9BTD8 480 aaKnown RBP29.03■■■□□ 2.24
SLC38A1-203ENST00000546519 RTCBQ9Y3I0 505 aaKnown RBP29.03■■■□□ 2.24
SLC38A1-203ENST00000546519 BRCA1P38398 1863 aaKnown RBP29.02■■■□□ 2.24
SLC38A1-203ENST00000546519 TRAPPC3LQ5T215 181 aa29.02■■■□□ 2.24
SLC38A1-203ENST00000546519 ZNF831Q5JPB2 1677 aa29.02■■■□□ 2.24
SLC38A1-203ENST00000546519 FANCIQ9NVI1 1328 aa29.01■■■□□ 2.23
SLC38A1-203ENST00000546519 ARHGEF1Q92888 912 aaKnown RBP29.01■■■□□ 2.23
SLC38A1-203ENST00000546519 TGFB2P61812 414 aa29■■■□□ 2.23
SLC38A1-203ENST00000546519 MBIPQ9NS73 344 aa29■■■□□ 2.23
SLC38A1-203ENST00000546519 LAS1LQ9Y4W2 734 aaKnown RBP29■■■□□ 2.23
SLC38A1-203ENST00000546519 DPEP1P16444 411 aa28.99■■■□□ 2.23
SLC38A1-203ENST00000546519 ARHGAP27Q6ZUM4 889 aa28.99■■■□□ 2.23
SLC38A1-203ENST00000546519 NFATC2IPQ8NCF5 419 aa28.99■■■□□ 2.23
SLC38A1-203ENST00000546519 TSPYL4Q9UJ04 414 aa28.99■■■□□ 2.23
SLC38A1-203ENST00000546519 CENPBP07199 599 aaPredicted RBP28.98■■■□□ 2.23
SLC38A1-203ENST00000546519 NLGN1Q8N2Q7 840 aa28.98■■■□□ 2.23
SLC38A1-203ENST00000546519 NMRK2Q9NPI5 230 aa28.98■■■□□ 2.23
SLC38A1-203ENST00000546519 MYH14Q7Z406 1995 aaKnown RBP28.98■■■□□ 2.23
SLC38A1-203ENST00000546519 BTBD11A6QL63 1104 aa28.97■■■□□ 2.23
SLC38A1-203ENST00000546519 GYS1P13807 737 aa28.97■■■□□ 2.23
SLC38A1-203ENST00000546519 TSR2Q969E8 191 aaKnown RBP28.96■■■□□ 2.23
SLC38A1-203ENST00000546519 CCDC87Q9NVE4 849 aa28.95■■■□□ 2.22
SLC38A1-203ENST00000546519 TOMM70O94826 608 aa28.94■■■□□ 2.22
SLC38A1-203ENST00000546519 APLP1P51693 650 aa28.94■■■□□ 2.22
SLC38A1-203ENST00000546519 CNTNAP4Q9C0A0 1308 aa28.94■■■□□ 2.22
SLC38A1-203ENST00000546519 ARFGEF1Q9Y6D6 1849 aa28.93■■■□□ 2.22
SLC38A1-203ENST00000546519 RFC4P35249 363 aa28.93■■■□□ 2.22
SLC38A1-203ENST00000546519 RC3H1Q5TC82 1133 aaKnown RBP28.93■■■□□ 2.22
SLC38A1-203ENST00000546519 RPS6KA4O75676 772 aa28.92■■■□□ 2.22
SLC38A1-203ENST00000546519 CT47B1P0C2W7 299 aaPredicted RBP28.92■■■□□ 2.22
SLC38A1-203ENST00000546519 MIS18AQ9NYP9 233 aa28.92■■■□□ 2.22
SLC38A1-203ENST00000546519 PARP3Q9Y6F1 533 aa28.92■■■□□ 2.22
SLC38A1-203ENST00000546519 UBR2Q8IWV8 1755 aa28.92■■■□□ 2.22
SLC38A1-203ENST00000546519 ADRA2BP18089 450 aa28.91■■■□□ 2.22
SLC38A1-203ENST00000546519 KCNA3P22001 575 aa28.91■■■□□ 2.22
SLC38A1-203ENST00000546519 ZNF790Q6PG37 636 aa28.91■■■□□ 2.22
SLC38A1-203ENST00000546519 DNAJC5GQ8N7S2 189 aa28.91■■■□□ 2.22
SLC38A1-203ENST00000546519 WDR90Q96KV7 1748 aa28.91■■■□□ 2.22
SLC38A1-203ENST00000546519 SOS1Q07889 1333 aaPredicted RBP28.9■■■□□ 2.22
SLC38A1-203ENST00000546519 TJP1Q07157 1748 aa28.89■■■□□ 2.22
SLC38A1-203ENST00000546519 SRP68Q9UHB9 627 aaKnown RBP28.89■■■□□ 2.22
SLC38A1-203ENST00000546519 PTCD1O75127 700 aaKnown RBP28.88■■■□□ 2.21
SLC38A1-203ENST00000546519 EXOSC9Q06265 439 aaKnown RBP28.88■■■□□ 2.21
SLC38A1-203ENST00000546519 C9orf131Q5VYM1 1079 aa28.88■■■□□ 2.21
SLC38A1-203ENST00000546519 TTC5Q8N0Z6 440 aa28.88■■■□□ 2.21
SLC38A1-203ENST00000546519 EIF4A1P60842 406 aaKnown RBP28.87■■■□□ 2.21
SLC38A1-203ENST00000546519 HEG1Q9ULI3 1381 aa28.87■■■□□ 2.21
SLC38A1-203ENST00000546519 HTRA3P83110 453 aa28.86■■■□□ 2.21
SLC38A1-203ENST00000546519 KCPQ6ZWJ8 1503 aa28.85■■■□□ 2.21
SLC38A1-203ENST00000546519 SLC39A6Q13433 755 aa28.85■■■□□ 2.21
SLC38A1-203ENST00000546519 KCNQ3O43525 872 aa28.84■■■□□ 2.21
SLC38A1-203ENST00000546519 HOXB7P09629 217 aa28.84■■■□□ 2.21
SLC38A1-203ENST00000546519 CRKLP46109 303 aaKnown RBP28.84■■■□□ 2.21
SLC38A1-203ENST00000546519 DDR1Q08345 913 aa28.84■■■□□ 2.21
SLC38A1-203ENST00000546519 FKBP8Q14318 412 aa28.84■■■□□ 2.21
SLC38A1-203ENST00000546519 ZNF428Q96B54 188 aa28.84■■■□□ 2.21
SLC38A1-203ENST00000546519 FMNL2Q96PY5 1086 aa28.83■■■□□ 2.21
SLC38A1-203ENST00000546519 PIM2Q9P1W9 311 aa28.83■■■□□ 2.21
SLC38A1-203ENST00000546519 C8orf58Q8NAV2 365 aa28.82■■■□□ 2.2
SLC38A1-203ENST00000546519 CHRNA5P30532 468 aa28.81■■■□□ 2.2
SLC38A1-203ENST00000546519 TWISTNBQ3B726 338 aaPredicted RBP28.81■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms