RNA–Protein interactions for RNA: ENST00000545868.4

GABRB3-205, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5 BASIC

Gene GABRB3, Length 1,267 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-205ENST00000545868 ATP10DQ9P241 1426 aa13.3□□□□□ -0.28
GABRB3-205ENST00000545868 AFDNP55196 1824 aaKnown RBP13.3□□□□□ -0.28
GABRB3-205ENST00000545868 SENP3-EIF4A1A0A087X0R7 540 aa13.3□□□□□ -0.28
GABRB3-205ENST00000545868 TNNT2P45379 298 aaPredicted RBP13.3□□□□□ -0.28
GABRB3-205ENST00000545868 SLC4A9Q96Q91 983 aa13.3□□□□□ -0.28
GABRB3-205ENST00000545868 TIMELESSQ9UNS1 1208 aa13.3□□□□□ -0.28
GABRB3-205ENST00000545868 SSFA2P28290 1259 aa13.29□□□□□ -0.28
GABRB3-205ENST00000545868 IFNL2Q8IZJ0 200 aa13.29□□□□□ -0.28
GABRB3-205ENST00000545868 POLR3GLQ9BT43 218 aa13.29□□□□□ -0.28
GABRB3-205ENST00000545868 ATG3Q9NT62 314 aa13.29□□□□□ -0.28
GABRB3-205ENST00000545868 RYDENQ9NUL5 291 aaKnown RBP13.29□□□□□ -0.28
GABRB3-205ENST00000545868 TMOD3Q9NYL9 352 aa13.29□□□□□ -0.28
GABRB3-205ENST00000545868 PLEKHG2Q9H7P9 1386 aa13.29□□□□□ -0.28
GABRB3-205ENST00000545868 CCDC88AQ3V6T2 1871 aa13.29□□□□□ -0.28
GABRB3-205ENST00000545868 GRIN3BO60391 1043 aa13.28□□□□□ -0.28
GABRB3-205ENST00000545868 GIGYF1O75420 1035 aaPredicted RBP13.28□□□□□ -0.28
GABRB3-205ENST00000545868 WWC3Q9ULE0 1092 aa13.28□□□□□ -0.28
GABRB3-205ENST00000545868 CLSPNQ9HAW4 1339 aa13.28□□□□□ -0.28
GABRB3-205ENST00000545868 GNPATO15228 680 aa13.27□□□□□ -0.29
GABRB3-205ENST00000545868 HSPA5P11021 654 aaKnown RBP13.27□□□□□ -0.29
GABRB3-205ENST00000545868 PXDNLA1KZ92 1463 aa13.27□□□□□ -0.29
GABRB3-205ENST00000545868 UBR2Q8IWV8 1755 aa13.27□□□□□ -0.29
GABRB3-205ENST00000545868 ATP6V1AP38606 617 aa13.26□□□□□ -0.29
GABRB3-205ENST00000545868 PANK3Q9H999 370 aa13.26□□□□□ -0.29
GABRB3-205ENST00000545868 C10orf71Q711Q0 1435 aa13.25□□□□□ -0.29
GABRB3-205ENST00000545868 AEBP1Q8IUX7 1158 aa13.25□□□□□ -0.29
GABRB3-205ENST00000545868 PHF12Q96QT6 1004 aa13.25□□□□□ -0.29
GABRB3-205ENST00000545868 PCGF6Q9BYE7 350 aa13.25□□□□□ -0.29
GABRB3-205ENST00000545868 SIPA1L3O60292 1781 aaPredicted RBP13.25□□□□□ -0.29
GABRB3-205ENST00000545868 DLEC1Q9Y238 1755 aa13.25□□□□□ -0.29
GABRB3-205ENST00000545868 HMGB2P26583 209 aaKnown RBP13.24□□□□□ -0.29
GABRB3-205ENST00000545868 NRXN2Q9P2S2 1712 aa13.22□□□□□ -0.29
GABRB3-205ENST00000545868 C19orf67A6NJJ6 358 aa13.22□□□□□ -0.29
GABRB3-205ENST00000545868 ERVV-2B6SEH9 535 aa13.22□□□□□ -0.29
GABRB3-205ENST00000545868 MMP10P09238 476 aa13.22□□□□□ -0.29
GABRB3-205ENST00000545868 EIF4G2P78344 907 aaKnown RBP eCLIP13.22□□□□□ -0.29
GABRB3-205ENST00000545868 ZNF530Q6P9A1 599 aaPredicted RBP13.22□□□□□ -0.29
GABRB3-205ENST00000545868 MRC1P22897 1456 aa13.22□□□□□ -0.29
GABRB3-205ENST00000545868 CNTNAP4Q9C0A0 1308 aa13.21□□□□□ -0.29
GABRB3-205ENST00000545868 DCAF5Q96JK2 942 aa13.21□□□□□ -0.29
GABRB3-205ENST00000545868 CACNA1SQ13698 1873 aa13.21□□□□□ -0.3
GABRB3-205ENST00000545868 ARHGEF1Q92888 912 aaKnown RBP13.2□□□□□ -0.3
GABRB3-205ENST00000545868 KCPQ6ZWJ8 1503 aa13.19□□□□□ -0.3
GABRB3-205ENST00000545868 ANKRD31Q8N7Z5 1873 aa13.19□□□□□ -0.3
GABRB3-205ENST00000545868 GYS1P13807 737 aa13.19□□□□□ -0.3
GABRB3-205ENST00000545868 PLEKHO1Q53GL0 409 aaPredicted RBP13.19□□□□□ -0.3
GABRB3-205ENST00000545868 RC3H1Q5TC82 1133 aaKnown RBP13.19□□□□□ -0.3
GABRB3-205ENST00000545868 ZNF526Q8TF50 670 aaPredicted RBP13.19□□□□□ -0.3
GABRB3-205ENST00000545868 MFRPQ9BY79 579 aa13.19□□□□□ -0.3
GABRB3-205ENST00000545868 RTCBQ9Y3I0 505 aaKnown RBP13.19□□□□□ -0.3
GABRB3-205ENST00000545868 HSP90AB1P08238 724 aaKnown RBP13.18□□□□□ -0.3
GABRB3-205ENST00000545868 IL13P35225 146 aa13.18□□□□□ -0.3
GABRB3-205ENST00000545868 TRAPPC3LQ5T215 181 aa13.18□□□□□ -0.3
GABRB3-205ENST00000545868 GPBP1L1Q9HC44 474 aaPredicted RBP13.18□□□□□ -0.3
GABRB3-205ENST00000545868 RPS6KA4O75676 772 aa13.17□□□□□ -0.3
GABRB3-205ENST00000545868 CABP4P57796 275 aa13.17□□□□□ -0.3
GABRB3-205ENST00000545868 AMOTQ4VCS5 1084 aa13.17□□□□□ -0.3
GABRB3-205ENST00000545868 SULT6B1Q6IMI4 303 aa13.17□□□□□ -0.3
GABRB3-205ENST00000545868 MORC1Q86VD1 984 aa13.17□□□□□ -0.3
GABRB3-205ENST00000545868 DICER1Q9UPY3 1922 aaKnown RBP13.17□□□□□ -0.3
GABRB3-205ENST00000545868 WDR90Q96KV7 1748 aa13.16□□□□□ -0.3
GABRB3-205ENST00000545868 A0A0G2JLW4 131 aa13.16□□□□□ -0.3
GABRB3-205ENST00000545868 PTCD1O75127 700 aaKnown RBP13.16□□□□□ -0.3
GABRB3-205ENST00000545868 CRKLP46109 303 aaKnown RBP13.16□□□□□ -0.3
GABRB3-205ENST00000545868 MTHFSP49914 203 aa13.16□□□□□ -0.3
GABRB3-205ENST00000545868 NFATC2IPQ8NCF5 419 aa13.16□□□□□ -0.3
GABRB3-205ENST00000545868 SRP68Q9UHB9 627 aaKnown RBP13.16□□□□□ -0.3
GABRB3-205ENST00000545868 TIAM2Q8IVF5 1701 aa13.16□□□□□ -0.3
GABRB3-205ENST00000545868 PCNTO95613 3336 aa13.16□□□□□ -0.3
GABRB3-205ENST00000545868 COL3A1P02461 1466 aaPredicted RBP13.16□□□□□ -0.3
GABRB3-205ENST00000545868 SCN7AQ01118 1682 aa13.15□□□□□ -0.3
GABRB3-205ENST00000545868 TNRC6CQ9HCJ0 1690 aaKnown RBP13.15□□□□□ -0.3
GABRB3-205ENST00000545868 KIF3CO14782 793 aa13.15□□□□□ -0.3
GABRB3-205ENST00000545868 KCNA3P22001 575 aa13.15□□□□□ -0.3
GABRB3-205ENST00000545868 NLGN1Q8N2Q7 840 aa13.15□□□□□ -0.3
GABRB3-205ENST00000545868 EFCAB3Q8N7B9 438 aa13.15□□□□□ -0.3
GABRB3-205ENST00000545868 COL11A2P13942 1736 aaPredicted RBP13.15□□□□□ -0.3
GABRB3-205ENST00000545868 KIF7Q2M1P5 1343 aa13.14□□□□□ -0.31
GABRB3-205ENST00000545868 DPEP1P16444 411 aa13.14□□□□□ -0.31
GABRB3-205ENST00000545868 RFC4P35249 363 aa13.14□□□□□ -0.31
GABRB3-205ENST00000545868 TGFB2P61812 414 aa13.14□□□□□ -0.31
GABRB3-205ENST00000545868 DDR1Q08345 913 aa13.14□□□□□ -0.31
GABRB3-205ENST00000545868 C1orf141Q5JVX7 400 aa13.14□□□□□ -0.31
GABRB3-205ENST00000545868 BCORQ6W2J9 1755 aa13.14□□□□□ -0.31
GABRB3-205ENST00000545868 USP42Q9H9J4 1324 aaKnown RBP13.13□□□□□ -0.31
GABRB3-205ENST00000545868 INTS5Q6P9B9 1019 aaKnown RBP13.13□□□□□ -0.31
GABRB3-205ENST00000545868 LGR6Q9HBX8 967 aa13.13□□□□□ -0.31
GABRB3-205ENST00000545868 BCS1LQ9Y276 419 aa13.13□□□□□ -0.31
GABRB3-205ENST00000545868 FER1L6Q2WGJ9 1857 aa13.12□□□□□ -0.31
GABRB3-205ENST00000545868 DLG5Q8TDM6 1919 aa13.12□□□□□ -0.31
GABRB3-205ENST00000545868 MS4A3Q96HJ5 214 aa13.12□□□□□ -0.31
GABRB3-205ENST00000545868 CCDC87Q9NVE4 849 aa13.12□□□□□ -0.31
GABRB3-205ENST00000545868 KNSTRNQ9Y448 316 aa13.12□□□□□ -0.31
GABRB3-205ENST00000545868 ARFGEF2Q9Y6D5 1785 aa13.12□□□□□ -0.31
GABRB3-205ENST00000545868 PER1O15534 1290 aaPredicted RBP13.11□□□□□ -0.31
GABRB3-205ENST00000545868 HMOX1P09601 288 aa13.11□□□□□ -0.31
GABRB3-205ENST00000545868 HSPA6P17066 643 aa13.11□□□□□ -0.31
GABRB3-205ENST00000545868 SLC39A6Q13433 755 aa13.11□□□□□ -0.31
GABRB3-205ENST00000545868 AKAP4Q5JQC9 854 aa13.11□□□□□ -0.31
GABRB3-205ENST00000545868 DNAJC10Q8IXB1 793 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms