RNA–Protein interactions for RNA: ENST00000545784.5

LINC00939-203, long intergenic non-protein coding RNA 939, humanhuman

TSL 1 (best)

Gene LINC00939, Length 2,078 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00939-203ENST00000545784 UBR2Q8IWV8 1755 aa13.33□□□□□ -0.28
LINC00939-203ENST00000545784 CYP19A1P11511 503 aaPredicted RBP13.33□□□□□ -0.28
LINC00939-203ENST00000545784 USP16Q9Y5T5 823 aa13.33□□□□□ -0.28
LINC00939-203ENST00000545784 KDM3BQ7LBC6 1761 aa13.33□□□□□ -0.28
LINC00939-203ENST00000545784 E9PSI1 815 aa13.32□□□□□ -0.28
LINC00939-203ENST00000545784 C8orf58Q8NAV2 365 aa13.32□□□□□ -0.28
LINC00939-203ENST00000545784 AKT1S1Q96B36 256 aa13.32□□□□□ -0.28
LINC00939-203ENST00000545784 TEX13AQ9BXU3 409 aaPredicted RBP13.32□□□□□ -0.28
LINC00939-203ENST00000545784 MYH16Q9H6N6 1097 aa13.32□□□□□ -0.28
LINC00939-203ENST00000545784 TCERG1O14776 1098 aaKnown RBP13.31□□□□□ -0.28
LINC00939-203ENST00000545784 RRP1P56182 461 aaKnown RBP13.31□□□□□ -0.28
LINC00939-203ENST00000545784 INTS5Q6P9B9 1019 aaKnown RBP13.31□□□□□ -0.28
LINC00939-203ENST00000545784 TSPYL6Q8N831 410 aa13.31□□□□□ -0.28
LINC00939-203ENST00000545784 ZNF831Q5JPB2 1677 aa13.31□□□□□ -0.28
LINC00939-203ENST00000545784 ZNF827Q17R98 1081 aa13.3□□□□□ -0.28
LINC00939-203ENST00000545784 RC3H1Q5TC82 1133 aaKnown RBP13.3□□□□□ -0.28
LINC00939-203ENST00000545784 DUSP27Q5VZP5 1158 aa13.3□□□□□ -0.28
LINC00939-203ENST00000545784 ANO8Q9HCE9 1232 aaPredicted RBP13.3□□□□□ -0.28
LINC00939-203ENST00000545784 ZBTB47Q9UFB7 747 aaPredicted RBP13.3□□□□□ -0.28
LINC00939-203ENST00000545784 DEKP35659 375 aaKnown RBP13.3□□□□□ -0.28
LINC00939-203ENST00000545784 RREB1Q92766 1687 aa13.29□□□□□ -0.28
LINC00939-203ENST00000545784 CNTNAP4Q9C0A0 1308 aa13.29□□□□□ -0.28
LINC00939-203ENST00000545784 HOXB7P09629 217 aa13.29□□□□□ -0.28
LINC00939-203ENST00000545784 CRKLP46109 303 aaKnown RBP13.29□□□□□ -0.28
LINC00939-203ENST00000545784 EXOSC9Q06265 439 aaKnown RBP13.29□□□□□ -0.28
LINC00939-203ENST00000545784 AMIGO3Q86WK7 504 aa13.29□□□□□ -0.28
LINC00939-203ENST00000545784 STARD3NLO95772 234 aa13.28□□□□□ -0.28
LINC00939-203ENST00000545784 A1BGP04217 495 aa13.28□□□□□ -0.28
LINC00939-203ENST00000545784 MS4A1P11836 297 aa13.28□□□□□ -0.28
LINC00939-203ENST00000545784 RTL5Q5HYW3 569 aaPredicted RBP13.28□□□□□ -0.28
LINC00939-203ENST00000545784 CICQ96RK0 1608 aaPredicted RBP13.28□□□□□ -0.28
LINC00939-203ENST00000545784 TJP1Q07157 1748 aa13.28□□□□□ -0.28
LINC00939-203ENST00000545784 ELL2O00472 640 aaPredicted RBP13.28□□□□□ -0.28
LINC00939-203ENST00000545784 HMGB2P26583 209 aaKnown RBP13.28□□□□□ -0.28
LINC00939-203ENST00000545784 SLC15A2Q16348 729 aa13.28□□□□□ -0.28
LINC00939-203ENST00000545784 RCAN3Q9UKA8 241 aa13.28□□□□□ -0.28
LINC00939-203ENST00000545784 NBPF26B4DH59 902 aa13.27□□□□□ -0.28
LINC00939-203ENST00000545784 VAMP4O75379 141 aa13.27□□□□□ -0.28
LINC00939-203ENST00000545784 PDIA6Q15084 440 aa13.27□□□□□ -0.28
LINC00939-203ENST00000545784 NBPF14Q5TI25 921 aa13.27□□□□□ -0.28
LINC00939-203ENST00000545784 NBPF10Q6P3W6 841 aaKnown RBP13.27□□□□□ -0.28
LINC00939-203ENST00000545784 NBPF15Q8N660 670 aa13.27□□□□□ -0.28
LINC00939-203ENST00000545784 CCDC87Q9NVE4 849 aa13.27□□□□□ -0.28
LINC00939-203ENST00000545784 NUP188Q5SRE5 1749 aa13.27□□□□□ -0.29
LINC00939-203ENST00000545784 SMIM5Q71RC9 77 aa13.27□□□□□ -0.29
LINC00939-203ENST00000545784 SOS1Q07889 1333 aaPredicted RBP13.26□□□□□ -0.29
LINC00939-203ENST00000545784 RPS6KA4O75676 772 aa13.26□□□□□ -0.29
LINC00939-203ENST00000545784 ZBTB1Q9Y2K1 713 aa13.26□□□□□ -0.29
LINC00939-203ENST00000545784 C5P01031 1676 aa13.26□□□□□ -0.29
LINC00939-203ENST00000545784 EIF2S2P20042 333 aaKnown RBP13.25□□□□□ -0.29
LINC00939-203ENST00000545784 TWISTNBQ3B726 338 aaPredicted RBP13.25□□□□□ -0.29
LINC00939-203ENST00000545784 LRP10Q7Z4F1 713 aa13.25□□□□□ -0.29
LINC00939-203ENST00000545784 STK32BQ9NY57 414 aa13.25□□□□□ -0.29
LINC00939-203ENST00000545784 TAF1LQ8IZX4 1826 aa13.25□□□□□ -0.29
LINC00939-203ENST00000545784 C4BP0C0L5 1744 aa13.25□□□□□ -0.29
LINC00939-203ENST00000545784 GNPATO15228 680 aa13.25□□□□□ -0.29
LINC00939-203ENST00000545784 AK7Q96M32 723 aa13.25□□□□□ -0.29
LINC00939-203ENST00000545784 COL5A3P25940 1745 aaPredicted RBP13.24□□□□□ -0.29
LINC00939-203ENST00000545784 CANXP27824 592 aaKnown RBP13.24□□□□□ -0.29
LINC00939-203ENST00000545784 PIP4K2AP48426 406 aaPredicted RBP13.24□□□□□ -0.29
LINC00939-203ENST00000545784 EIF5P55010 431 aaKnown RBP13.24□□□□□ -0.29
LINC00939-203ENST00000545784 PROSER3Q2NL68 480 aa13.24□□□□□ -0.29
LINC00939-203ENST00000545784 HDGFL1Q5TGJ6 251 aa13.24□□□□□ -0.29
LINC00939-203ENST00000545784 NECTIN2Q92692 538 aa13.24□□□□□ -0.29
LINC00939-203ENST00000545784 TFCP2L1Q9NZI6 479 aa13.24□□□□□ -0.29
LINC00939-203ENST00000545784 MYH14Q7Z406 1995 aaKnown RBP13.24□□□□□ -0.29
LINC00939-203ENST00000545784 ERBB4Q15303 1308 aa13.23□□□□□ -0.29
LINC00939-203ENST00000545784 PNPLA7Q6ZV29 1317 aa13.23□□□□□ -0.29
LINC00939-203ENST00000545784 IL6STP40189 918 aaPredicted RBP13.23□□□□□ -0.29
LINC00939-203ENST00000545784 RTCBQ9Y3I0 505 aaKnown RBP13.23□□□□□ -0.29
LINC00939-203ENST00000545784 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.22□□□□□ -0.29
LINC00939-203ENST00000545784 SSFA2P28290 1259 aa13.22□□□□□ -0.29
LINC00939-203ENST00000545784 R3HDM1Q15032 1099 aaKnown RBP13.22□□□□□ -0.29
LINC00939-203ENST00000545784 COL23A1Q86Y22 540 aaPredicted RBP13.22□□□□□ -0.29
LINC00939-203ENST00000545784 ARHGEF1Q92888 912 aaKnown RBP13.22□□□□□ -0.29
LINC00939-203ENST00000545784 PDGFDQ9GZP0 370 aaPredicted RBP13.22□□□□□ -0.29
LINC00939-203ENST00000545784 DDX21Q9NR30 783 aaKnown RBP eCLIP13.22□□□□□ -0.29
LINC00939-203ENST00000545784 CHPF2Q9P2E5 772 aa13.22□□□□□ -0.29
LINC00939-203ENST00000545784 ANXA1P04083 346 aa13.21□□□□□ -0.29
LINC00939-203ENST00000545784 ADRA2BP18089 450 aa13.21□□□□□ -0.29
LINC00939-203ENST00000545784 TRAPPC3LQ5T215 181 aa13.21□□□□□ -0.29
LINC00939-203ENST00000545784 CCDC30Q5VVM6 783 aa13.21□□□□□ -0.29
LINC00939-203ENST00000545784 MYL6BP14649 208 aa13.2□□□□□ -0.3
LINC00939-203ENST00000545784 NBR1Q14596 966 aa13.2□□□□□ -0.3
LINC00939-203ENST00000545784 FLAD1Q8NFF5 587 aa13.2□□□□□ -0.3
LINC00939-203ENST00000545784 DBF4Q9UBU7 674 aaPredicted RBP13.2□□□□□ -0.3
LINC00939-203ENST00000545784 PHF14O94880 888 aa13.2□□□□□ -0.3
LINC00939-203ENST00000545784 CT47B1P0C2W7 299 aaPredicted RBP13.2□□□□□ -0.3
LINC00939-203ENST00000545784 CHMP4AQ9BY43 222 aa13.2□□□□□ -0.3
LINC00939-203ENST00000545784 PSDA5PKW4 1024 aaPredicted RBP13.19□□□□□ -0.3
LINC00939-203ENST00000545784 EXOC6Q8TAG9 804 aa13.19□□□□□ -0.3
LINC00939-203ENST00000545784 ZNF428Q96B54 188 aa13.19□□□□□ -0.3
LINC00939-203ENST00000545784 HYPKQ9NX55 129 aa13.19□□□□□ -0.3
LINC00939-203ENST00000545784 COL15A1P39059 1388 aa13.18□□□□□ -0.3
LINC00939-203ENST00000545784 LAMB4A4D0S4 1761 aa13.18□□□□□ -0.3
LINC00939-203ENST00000545784 UBR3Q6ZT12 1888 aa13.18□□□□□ -0.3
LINC00939-203ENST00000545784 A0A087WZG4 1122 aa13.18□□□□□ -0.3
LINC00939-203ENST00000545784 SLC4A2P04920 1241 aa13.18□□□□□ -0.3
LINC00939-203ENST00000545784 TTLL7Q6ZT98 887 aa13.18□□□□□ -0.3
LINC00939-203ENST00000545784 BACH2Q9BYV9 841 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms