RNA–Protein interactions for RNA: ENST00000545688.5

SNHG1-224, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3

Gene SNHG1, Length 610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-224ENST00000545688 SLC9A9Q8IVB4 645 aa10.25□□□□□ -0.77
SNHG1-224ENST00000545688 ZDHHC1Q8WTX9 485 aa10.25□□□□□ -0.77
SNHG1-224ENST00000545688 ZNF594Q96JF6 807 aaPredicted RBP10.25□□□□□ -0.77
SNHG1-224ENST00000545688 LARGE2Q8N3Y3 721 aa10.24□□□□□ -0.77
SNHG1-224ENST00000545688 ABHD17AQ96GS6 310 aa10.24□□□□□ -0.77
SNHG1-224ENST00000545688 PPP1R12CQ9BZL4 782 aa10.24□□□□□ -0.77
SNHG1-224ENST00000545688 ZDHHC3Q9NYG2 299 aa10.24□□□□□ -0.77
SNHG1-224ENST00000545688 PHF24Q9UPV7 400 aa10.24□□□□□ -0.77
SNHG1-224ENST00000545688 BNIP3LO60238 219 aa10.23□□□□□ -0.77
SNHG1-224ENST00000545688 SIX5Q8N196 739 aa10.23□□□□□ -0.77
SNHG1-224ENST00000545688 ACDQ96AP0 544 aa10.23□□□□□ -0.77
SNHG1-224ENST00000545688 NDFIP2Q9NV92 336 aa10.23□□□□□ -0.77
SNHG1-224ENST00000545688 ATXN7L1Q9ULK2 861 aaPredicted RBP10.23□□□□□ -0.77
SNHG1-224ENST00000545688 NSFL1CQ9UNZ2 370 aaKnown RBP10.23□□□□□ -0.77
SNHG1-224ENST00000545688 A0A1W2PNR3 127 aa10.22□□□□□ -0.77
SNHG1-224ENST00000545688 DKK1O94907 266 aa10.22□□□□□ -0.77
SNHG1-224ENST00000545688 TATP17735 454 aaPredicted RBP10.22□□□□□ -0.77
SNHG1-224ENST00000545688 TXLNAP40222 546 aa10.22□□□□□ -0.77
SNHG1-224ENST00000545688 MAP3K10Q02779 954 aa10.22□□□□□ -0.77
SNHG1-224ENST00000545688 ARSJQ5FYB0 599 aaPredicted RBP10.22□□□□□ -0.77
SNHG1-224ENST00000545688 ZNF777Q9ULD5 760 aaPredicted RBP10.22□□□□□ -0.77
SNHG1-224ENST00000545688 SFI1A8K8P3 1242 aa10.21□□□□□ -0.77
SNHG1-224ENST00000545688 RASA1P20936 1047 aa10.21□□□□□ -0.77
SNHG1-224ENST00000545688 TEAD4Q15561 434 aa10.21□□□□□ -0.77
SNHG1-224ENST00000545688 NLRP8Q86W28 1048 aa10.21□□□□□ -0.77
SNHG1-224ENST00000545688 L3MBTL2Q969R5 705 aa10.21□□□□□ -0.77
SNHG1-224ENST00000545688 ZIC5Q96T25 663 aa10.21□□□□□ -0.77
SNHG1-224ENST00000545688 ZCCHC2Q9C0B9 1178 aaKnown RBP10.21□□□□□ -0.77
SNHG1-224ENST00000545688 BCRP11274 1271 aa10.2□□□□□ -0.78
SNHG1-224ENST00000545688 MAP2K3P46734 347 aa10.2□□□□□ -0.78
SNHG1-224ENST00000545688 FIGNL1Q6PIW4 674 aa10.2□□□□□ -0.78
SNHG1-224ENST00000545688 TSEN2Q8NCE0 465 aaKnown RBP10.2□□□□□ -0.78
SNHG1-224ENST00000545688 TSPAN10Q9H1Z9 355 aaPredicted RBP10.2□□□□□ -0.78
SNHG1-224ENST00000545688 M0R2N6 131 aa10.19□□□□□ -0.78
SNHG1-224ENST00000545688 FGFR3P22607 806 aa10.19□□□□□ -0.78
SNHG1-224ENST00000545688 NOS2P35228 1153 aa10.19□□□□□ -0.78
SNHG1-224ENST00000545688 SH3PXD2AQ5TCZ1 1133 aa10.19□□□□□ -0.78
SNHG1-224ENST00000545688 ZNF232Q9UNY5 417 aa10.19□□□□□ -0.78
SNHG1-224ENST00000545688 RBM19Q9Y4C8 960 aaKnown RBP10.19□□□□□ -0.78
SNHG1-224ENST00000545688 PCDHGC4Q9Y5F7 938 aa10.19□□□□□ -0.78
SNHG1-224ENST00000545688 ATXN7O15265 892 aaPredicted RBP10.18□□□□□ -0.78
SNHG1-224ENST00000545688 LMOD1P29536 600 aaPredicted RBP10.18□□□□□ -0.78
SNHG1-224ENST00000545688 CTBSQ01459 385 aa10.18□□□□□ -0.78
SNHG1-224ENST00000545688 BICDL1Q6ZP65 573 aa10.18□□□□□ -0.78
SNHG1-224ENST00000545688 KLRG1Q96E93 195 aa10.18□□□□□ -0.78
SNHG1-224ENST00000545688 OXCT2Q9BYC2 517 aaPredicted RBP10.18□□□□□ -0.78
SNHG1-224ENST00000545688 SERTM1A2A2V5 107 aa10.17□□□□□ -0.78
SNHG1-224ENST00000545688 C2CD2LO14523 706 aa10.17□□□□□ -0.78
SNHG1-224ENST00000545688 GSK3AP49840 483 aa10.17□□□□□ -0.78
SNHG1-224ENST00000545688 KCNMA1Q12791 1236 aa10.17□□□□□ -0.78
SNHG1-224ENST00000545688 CRTC2Q53ET0 693 aaPredicted RBP10.17□□□□□ -0.78
SNHG1-224ENST00000545688 KANK4Q5T7N3 995 aaPredicted RBP10.17□□□□□ -0.78
SNHG1-224ENST00000545688 DCDC2BA2VCK2 349 aa10.16□□□□□ -0.78
SNHG1-224ENST00000545688 EML1O00423 815 aa10.16□□□□□ -0.78
SNHG1-224ENST00000545688 BMP4P12644 408 aa10.16□□□□□ -0.78
SNHG1-224ENST00000545688 MARSP56192 900 aaKnown RBP10.16□□□□□ -0.78
SNHG1-224ENST00000545688 PSMA6P60900 246 aaKnown RBP10.16□□□□□ -0.78
SNHG1-224ENST00000545688 LARP1Q6PKG0 1096 aaKnown RBP10.16□□□□□ -0.78
SNHG1-224ENST00000545688 ENAMQ9NRM1 1142 aa10.16□□□□□ -0.78
SNHG1-224ENST00000545688 HCN2Q9UL51 889 aa10.16□□□□□ -0.78
SNHG1-224ENST00000545688 GJA3Q9Y6H8 435 aa10.16□□□□□ -0.78
SNHG1-224ENST00000545688 SEC13P55735 322 aa10.15□□□□□ -0.78
SNHG1-224ENST00000545688 PTK7Q13308 1070 aa10.15□□□□□ -0.78
SNHG1-224ENST00000545688 USP17L15C9J2P7 530 aa10.14□□□□□ -0.79
SNHG1-224ENST00000545688 USP17L10C9JJH3 530 aa10.14□□□□□ -0.79
SNHG1-224ENST00000545688 USP17L13C9JLJ4 530 aa10.14□□□□□ -0.79
SNHG1-224ENST00000545688 USP17L12C9JPN9 530 aa10.14□□□□□ -0.79
SNHG1-224ENST00000545688 USP17L11C9JVI0 530 aa10.14□□□□□ -0.79
SNHG1-224ENST00000545688 USP17L21D6R901 530 aa10.14□□□□□ -0.79
SNHG1-224ENST00000545688 USP17L18D6R9N7 530 aa10.14□□□□□ -0.79
SNHG1-224ENST00000545688 USP17L22D6RA61 530 aa10.14□□□□□ -0.79
SNHG1-224ENST00000545688 USP17L17D6RBQ6 530 aa10.14□□□□□ -0.79
SNHG1-224ENST00000545688 USP17L19D6RCP7 530 aa10.14□□□□□ -0.79
SNHG1-224ENST00000545688 USP17L20D6RJB6 530 aa10.14□□□□□ -0.79
SNHG1-224ENST00000545688 RNF225M0QZC1 329 aaPredicted RBP10.14□□□□□ -0.79
SNHG1-224ENST00000545688 KHNYNO15037 678 aaKnown RBP10.14□□□□□ -0.79
SNHG1-224ENST00000545688 OIP5O43482 229 aa10.14□□□□□ -0.79
SNHG1-224ENST00000545688 MAPTP10636 758 aaKnown RBP10.14□□□□□ -0.79
SNHG1-224ENST00000545688 TNP2Q05952 138 aa10.14□□□□□ -0.79
SNHG1-224ENST00000545688 USP17L24Q0WX57 530 aa10.14□□□□□ -0.79
SNHG1-224ENST00000545688 CFAP70Q5T0N1 1121 aa10.14□□□□□ -0.79
SNHG1-224ENST00000545688 C21orf2O43822 256 aa10.13□□□□□ -0.79
SNHG1-224ENST00000545688 DPYDQ12882 1025 aa10.13□□□□□ -0.79
SNHG1-224ENST00000545688 NEDD1Q8NHV4 660 aa10.13□□□□□ -0.79
SNHG1-224ENST00000545688 C7orf43Q8WVR3 580 aa10.13□□□□□ -0.79
SNHG1-224ENST00000545688 VRTNQ9H8Y1 702 aa10.13□□□□□ -0.79
SNHG1-224ENST00000545688 LRRC4BQ9NT99 713 aa10.13□□□□□ -0.79
SNHG1-224ENST00000545688 FAM196BA6NMK8 535 aa10.12□□□□□ -0.79
SNHG1-224ENST00000545688 PPP1R12BO60237 982 aaPredicted RBP10.12□□□□□ -0.79
SNHG1-224ENST00000545688 FAM157BP0CG42 384 aa10.12□□□□□ -0.79
SNHG1-224ENST00000545688 CD33P20138 364 aa10.12□□□□□ -0.79
SNHG1-224ENST00000545688 SAMD5Q5TGI4 173 aa10.12□□□□□ -0.79
SNHG1-224ENST00000545688 POTEAQ6S8J7 498 aa10.12□□□□□ -0.79
SNHG1-224ENST00000545688 LRRC69Q6ZNQ3 347 aa10.12□□□□□ -0.79
SNHG1-224ENST00000545688 C1orf229Q6ZS94 237 aaPredicted RBP10.12□□□□□ -0.79
SNHG1-224ENST00000545688 RHPN1Q8TCX5 695 aa10.12□□□□□ -0.79
SNHG1-224ENST00000545688 GDF2Q9UK05 429 aaPredicted RBP10.12□□□□□ -0.79
SNHG1-224ENST00000545688 CHMP3Q9Y3E7 222 aa10.12□□□□□ -0.79
SNHG1-224ENST00000545688 HCN4Q9Y3Q4 1203 aa10.12□□□□□ -0.79
SNHG1-224ENST00000545688 SHISA8B8ZZ34 492 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms