RNA–Protein interactions for RNA: ENST00000545367.5

NPIPB4-221, Transcript of nuclear pore complex interacting protein family member B4, humanhuman

TSL 2

Gene NPIPB4, Length 846 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4-221ENST00000545367 ASAP1Q9ULH1 1129 aa12.07□□□□□ -0.48
NPIPB4-221ENST00000545367 DICER1Q9UPY3 1922 aaKnown RBP12.07□□□□□ -0.48
NPIPB4-221ENST00000545367 NEUROD1Q13562 356 aa12.06□□□□□ -0.48
NPIPB4-221ENST00000545367 DCAF5Q96JK2 942 aa12.06□□□□□ -0.48
NPIPB4-221ENST00000545367 RRAGCQ9HB90 399 aa12.06□□□□□ -0.48
NPIPB4-221ENST00000545367 COL11A2P13942 1736 aaPredicted RBP12.06□□□□□ -0.48
NPIPB4-221ENST00000545367 RASEFQ8IZ41 740 aa12.05□□□□□ -0.48
NPIPB4-221ENST00000545367 NRXN2Q9P2S2 1712 aa12.05□□□□□ -0.48
NPIPB4-221ENST00000545367 KDM6AO15550 1401 aaPredicted RBP12.04□□□□□ -0.48
NPIPB4-221ENST00000545367 GYS1P13807 737 aa12.04□□□□□ -0.48
NPIPB4-221ENST00000545367 TMF1P82094 1093 aa12.04□□□□□ -0.48
NPIPB4-221ENST00000545367 RASSF7Q02833 373 aa12.04□□□□□ -0.48
NPIPB4-221ENST00000545367 FAM212AQ96EL1 285 aa12.04□□□□□ -0.48
NPIPB4-221ENST00000545367 RTCBQ9Y3I0 505 aaKnown RBP12.04□□□□□ -0.48
NPIPB4-221ENST00000545367 PARP3Q9Y6F1 533 aa12.04□□□□□ -0.48
NPIPB4-221ENST00000545367 KIF24Q5T7B8 1368 aa12.04□□□□□ -0.48
NPIPB4-221ENST00000545367 SLC34A2O95436 690 aa12.03□□□□□ -0.48
NPIPB4-221ENST00000545367 KCNA3P22001 575 aa12.03□□□□□ -0.48
NPIPB4-221ENST00000545367 CLCN6P51797 869 aa12.03□□□□□ -0.48
NPIPB4-221ENST00000545367 DALRD3Q5D0E6 543 aaKnown RBP12.03□□□□□ -0.48
NPIPB4-221ENST00000545367 ANKRD31Q8N7Z5 1873 aa12.02□□□□□ -0.48
NPIPB4-221ENST00000545367 CHRNA5P30532 468 aa12.02□□□□□ -0.49
NPIPB4-221ENST00000545367 NKX1-1Q15270 411 aaPredicted RBP12.02□□□□□ -0.49
NPIPB4-221ENST00000545367 TRAPPC3LQ5T215 181 aa12.02□□□□□ -0.49
NPIPB4-221ENST00000545367 NLGN1Q8N2Q7 840 aa12.02□□□□□ -0.49
NPIPB4-221ENST00000545367 ZNF579Q8NAF0 562 aaKnown RBP12.02□□□□□ -0.49
NPIPB4-221ENST00000545367 ATG3Q9NT62 314 aa12.02□□□□□ -0.49
NPIPB4-221ENST00000545367 PIM2Q9P1W9 311 aa12.02□□□□□ -0.49
NPIPB4-221ENST00000545367 SPG7Q9UQ90 795 aa12.02□□□□□ -0.49
NPIPB4-221ENST00000545367 CNTNAP4Q9C0A0 1308 aa12.02□□□□□ -0.49
NPIPB4-221ENST00000545367 SCN11AQ9UI33 1791 aa12.01□□□□□ -0.49
NPIPB4-221ENST00000545367 RFC4P35249 363 aa12.01□□□□□ -0.49
NPIPB4-221ENST00000545367 DDR1Q08345 913 aa12.01□□□□□ -0.49
NPIPB4-221ENST00000545367 EMILIN1Q9Y6C2 1016 aa12.01□□□□□ -0.49
NPIPB4-221ENST00000545367 FER1L6Q2WGJ9 1857 aa12.01□□□□□ -0.49
NPIPB4-221ENST00000545367 FYB1O15117 783 aa12□□□□□ -0.49
NPIPB4-221ENST00000545367 PHKG2P15735 406 aa12□□□□□ -0.49
NPIPB4-221ENST00000545367 EVX2Q03828 476 aa12□□□□□ -0.49
NPIPB4-221ENST00000545367 ARHGEF1Q92888 912 aaKnown RBP12□□□□□ -0.49
NPIPB4-221ENST00000545367 PUS7Q96PZ0 661 aaKnown RBP12□□□□□ -0.49
NPIPB4-221ENST00000545367 SLC4A9Q96Q91 983 aa12□□□□□ -0.49
NPIPB4-221ENST00000545367 TESK2Q96S53 571 aa12□□□□□ -0.49
NPIPB4-221ENST00000545367 ZC3H4Q9UPT8 1303 aaKnown RBP12□□□□□ -0.49
NPIPB4-221ENST00000545367 SCN7AQ01118 1682 aa12□□□□□ -0.49
NPIPB4-221ENST00000545367 ARFGEF2Q9Y6D5 1785 aa12□□□□□ -0.49
NPIPB4-221ENST00000545367 GSE1Q14687 1217 aa11.99□□□□□ -0.49
NPIPB4-221ENST00000545367 SP7Q8TDD2 431 aaPredicted RBP11.99□□□□□ -0.49
NPIPB4-221ENST00000545367 SRP68Q9UHB9 627 aaKnown RBP11.99□□□□□ -0.49
NPIPB4-221ENST00000545367 TONSLQ96HA7 1378 aa11.98□□□□□ -0.49
NPIPB4-221ENST00000545367 USP42Q9H9J4 1324 aaKnown RBP11.98□□□□□ -0.49
NPIPB4-221ENST00000545367 PPM1GO15355 546 aaPredicted RBP11.98□□□□□ -0.49
NPIPB4-221ENST00000545367 MKRN1Q9UHC7 482 aaKnown RBP11.98□□□□□ -0.49
NPIPB4-221ENST00000545367 IFNL2Q8IZJ0 200 aa11.97□□□□□ -0.49
NPIPB4-221ENST00000545367 VEGFAP15692 232 aaPredicted RBP11.96□□□□□ -0.49
NPIPB4-221ENST00000545367 TSPYL2Q9H2G4 693 aaPredicted RBP11.96□□□□□ -0.49
NPIPB4-221ENST00000545367 CARMIL3Q8ND23 1372 aa11.95□□□□□ -0.5
NPIPB4-221ENST00000545367 ST20-MTHFSA0A0A6YYL1 179 aa11.95□□□□□ -0.5
NPIPB4-221ENST00000545367 FOXN1O15353 648 aa11.95□□□□□ -0.5
NPIPB4-221ENST00000545367 RPS6KA4O75676 772 aa11.95□□□□□ -0.5
NPIPB4-221ENST00000545367 LMNB1P20700 586 aa11.95□□□□□ -0.5
NPIPB4-221ENST00000545367 RC3H1Q5TC82 1133 aaKnown RBP11.95□□□□□ -0.5
NPIPB4-221ENST00000545367 THSD7BQ9C0I4 1608 aa11.94□□□□□ -0.5
NPIPB4-221ENST00000545367 GLTPD2A6NH11 291 aa11.94□□□□□ -0.5
NPIPB4-221ENST00000545367 POLRMTO00411 1230 aaKnown RBP11.94□□□□□ -0.5
NPIPB4-221ENST00000545367 CRKLP46109 303 aaKnown RBP11.94□□□□□ -0.5
NPIPB4-221ENST00000545367 EYA1Q99502 592 aa11.94□□□□□ -0.5
NPIPB4-221ENST00000545367 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.94□□□□□ -0.5
NPIPB4-221ENST00000545367 SCN4AP35499 1836 aa11.94□□□□□ -0.5
NPIPB4-221ENST00000545367 UBR2Q8IWV8 1755 aa11.94□□□□□ -0.5
NPIPB4-221ENST00000545367 CNTNAP1P78357 1384 aa11.93□□□□□ -0.5
NPIPB4-221ENST00000545367 FAM161AQ3B820 660 aa11.93□□□□□ -0.5
NPIPB4-221ENST00000545367 PTCD1O75127 700 aaKnown RBP11.92□□□□□ -0.5
NPIPB4-221ENST00000545367 DCAF8Q5TAQ9 597 aa11.92□□□□□ -0.5
NPIPB4-221ENST00000545367 BBXQ8WY36 941 aaPredicted RBP11.92□□□□□ -0.5
NPIPB4-221ENST00000545367 ADAMTSL1Q8N6G6 1762 aa11.92□□□□□ -0.5
NPIPB4-221ENST00000545367 NFKBIEO00221 500 aa11.91□□□□□ -0.5
NPIPB4-221ENST00000545367 AIDAQ96BJ3 306 aa11.91□□□□□ -0.5
NPIPB4-221ENST00000545367 BCORQ6W2J9 1755 aa11.91□□□□□ -0.5
NPIPB4-221ENST00000545367 SLX4Q8IY92 1834 aa11.9□□□□□ -0.5
NPIPB4-221ENST00000545367 WASHC2AQ641Q2 1341 aa11.9□□□□□ -0.5
NPIPB4-221ENST00000545367 ERVV-2B6SEH9 535 aa11.9□□□□□ -0.5
NPIPB4-221ENST00000545367 POTEIP0CG38 1075 aa11.9□□□□□ -0.5
NPIPB4-221ENST00000545367 POTEJP0CG39 1038 aa11.9□□□□□ -0.5
NPIPB4-221ENST00000545367 COL15A1P39059 1388 aa11.9□□□□□ -0.5
NPIPB4-221ENST00000545367 MRC1P22897 1456 aa11.89□□□□□ -0.51
NPIPB4-221ENST00000545367 CABP4P57796 275 aa11.89□□□□□ -0.51
NPIPB4-221ENST00000545367 USPL1Q5W0Q7 1092 aa11.89□□□□□ -0.51
NPIPB4-221ENST00000545367 ZNF530Q6P9A1 599 aaPredicted RBP11.89□□□□□ -0.51
NPIPB4-221ENST00000545367 PRDM10Q9NQV6 1147 aa11.89□□□□□ -0.51
NPIPB4-221ENST00000545367 LTBP1Q14766 1721 aa11.89□□□□□ -0.51
NPIPB4-221ENST00000545367 SOS1Q07889 1333 aaPredicted RBP11.88□□□□□ -0.51
NPIPB4-221ENST00000545367 POTECB2RU33 542 aa11.88□□□□□ -0.51
NPIPB4-221ENST00000545367 TNRC18O15417 2968 aaPredicted RBP11.88□□□□□ -0.51
NPIPB4-221ENST00000545367 CTCFP49711 727 aaPredicted RBP11.88□□□□□ -0.51
NPIPB4-221ENST00000545367 EIF4A2Q14240 407 aaKnown RBP11.88□□□□□ -0.51
NPIPB4-221ENST00000545367 TPRNQ4KMQ1 711 aa11.88□□□□□ -0.51
NPIPB4-221ENST00000545367 PDE4DIPQ5VU43 2346 aa11.87□□□□□ -0.51
NPIPB4-221ENST00000545367 ZPR1O75312 459 aa11.87□□□□□ -0.51
NPIPB4-221ENST00000545367 HSP90AB1P08238 724 aaKnown RBP11.87□□□□□ -0.51
NPIPB4-221ENST00000545367 CHRM1P11229 460 aaPredicted RBP11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms