RNA–Protein interactions for RNA: ENST00000545021.2

LYSMD4-210, Transcript of LysM domain containing 4, humanhuman

TSL 4 BASIC

Gene LYSMD4, Length 2,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-210ENST00000545021 U2AF1L5P0DN76 240 aaPredicted RBP23.12■■□□□ 1.29
LYSMD4-210ENST00000545021 MCM2P49736 904 aa23.12■■□□□ 1.29
LYSMD4-210ENST00000545021 U2AF1Q01081 240 aaKnown RBP eCLIP23.12■■□□□ 1.29
LYSMD4-210ENST00000545021 FAM53CQ9NYF3 392 aa23.12■■□□□ 1.29
LYSMD4-210ENST00000545021 CUL4AQ13619 759 aa23.11■■□□□ 1.29
LYSMD4-210ENST00000545021 TMEM87AQ8NBN3 555 aa23.11■■□□□ 1.29
LYSMD4-210ENST00000545021 TMX3Q96JJ7 454 aa23.11■■□□□ 1.29
LYSMD4-210ENST00000545021 SBNO2Q9Y2G9 1366 aa23.11■■□□□ 1.29
LYSMD4-210ENST00000545021 CASC1Q6TDU7 716 aa23.11■■□□□ 1.29
LYSMD4-210ENST00000545021 TRIM35Q9UPQ4 493 aa23.11■■□□□ 1.29
LYSMD4-210ENST00000545021 ESCO1Q5FWF5 840 aa23.1■■□□□ 1.29
LYSMD4-210ENST00000545021 INTS4Q96HW7 963 aaKnown RBP23.1■■□□□ 1.29
LYSMD4-210ENST00000545021 ALS2Q96Q42 1657 aa23.1■■□□□ 1.29
LYSMD4-210ENST00000545021 REC8O95072 547 aa23.1■■□□□ 1.29
LYSMD4-210ENST00000545021 MX1P20591 662 aa23.1■■□□□ 1.29
LYSMD4-210ENST00000545021 PHF8Q9UPP1 1060 aa23.1■■□□□ 1.29
LYSMD4-210ENST00000545021 USP48Q86UV5 1035 aa23.09■■□□□ 1.29
LYSMD4-210ENST00000545021 ABCA3Q99758 1704 aa23.09■■□□□ 1.29
LYSMD4-210ENST00000545021 TMPOP42166 694 aaKnown RBP23.09■■□□□ 1.29
LYSMD4-210ENST00000545021 PAXBP1Q9Y5B6 917 aa23.09■■□□□ 1.29
LYSMD4-210ENST00000545021 TNS3Q68CZ2 1445 aa23.08■■□□□ 1.29
LYSMD4-210ENST00000545021 ZNF428Q96B54 188 aa23.08■■□□□ 1.29
LYSMD4-210ENST00000545021 C1orf115Q9H7X2 142 aa23.08■■□□□ 1.29
LYSMD4-210ENST00000545021 TEX2Q8IWB9 1127 aa23.07■■□□□ 1.28
LYSMD4-210ENST00000545021 ZNF397Q8NF99 534 aaPredicted RBP23.07■■□□□ 1.28
LYSMD4-210ENST00000545021 ARHGAP45Q92619 1136 aa23.06■■□□□ 1.28
LYSMD4-210ENST00000545021 FUCA2Q9BTY2 467 aa23.06■■□□□ 1.28
LYSMD4-210ENST00000545021 SPATA31A3Q5VYP0 1347 aa23.06■■□□□ 1.28
LYSMD4-210ENST00000545021 PSME1Q06323 249 aa23.06■■□□□ 1.28
LYSMD4-210ENST00000545021 PLEKHF1Q96S99 279 aa23.06■■□□□ 1.28
LYSMD4-210ENST00000545021 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.05■■□□□ 1.28
LYSMD4-210ENST00000545021 PRR36Q9H6K5 1346 aa23.05■■□□□ 1.28
LYSMD4-210ENST00000545021 TRIM6-TRIM34B2RNG4 842 aa23.05■■□□□ 1.28
LYSMD4-210ENST00000545021 AP5Z1O43299 807 aa23.05■■□□□ 1.28
LYSMD4-210ENST00000545021 TRIM34Q9BYJ4 488 aa23.05■■□□□ 1.28
LYSMD4-210ENST00000545021 CRYBG1Q9Y4K1 1723 aa23.05■■□□□ 1.28
LYSMD4-210ENST00000545021 MINK1Q8N4C8 1332 aaPredicted RBP23.05■■□□□ 1.28
LYSMD4-210ENST00000545021 SMARCA5O60264 1052 aaPredicted RBP23.04■■□□□ 1.28
LYSMD4-210ENST00000545021 MAPK8IP2Q13387 824 aaPredicted RBP23.04■■□□□ 1.28
LYSMD4-210ENST00000545021 CCDC112Q8NEF3 446 aa23.04■■□□□ 1.28
LYSMD4-210ENST00000545021 ARHGEF10O15013 1369 aa23.04■■□□□ 1.28
LYSMD4-210ENST00000545021 CHRM1P11229 460 aaPredicted RBP23.04■■□□□ 1.28
LYSMD4-210ENST00000545021 GDPD2Q9HCC8 539 aa23.04■■□□□ 1.28
LYSMD4-210ENST00000545021 RGS17Q9UGC6 210 aaPredicted RBP23.04■■□□□ 1.28
LYSMD4-210ENST00000545021 CDK12Q9NYV4 1490 aaPredicted RBP23.03■■□□□ 1.28
LYSMD4-210ENST00000545021 WDR33Q9C0J8 1336 aaKnown RBP23.03■■□□□ 1.28
LYSMD4-210ENST00000545021 ERICH4A6NGS2 130 aa23.02■■□□□ 1.28
LYSMD4-210ENST00000545021 SDSP20132 328 aa23.02■■□□□ 1.28
LYSMD4-210ENST00000545021 NEK4P51957 841 aa23.02■■□□□ 1.28
LYSMD4-210ENST00000545021 PLCB2Q00722 1185 aa23.02■■□□□ 1.28
LYSMD4-210ENST00000545021 ILDR2Q71H61 639 aa23.02■■□□□ 1.28
LYSMD4-210ENST00000545021 ERC2O15083 957 aa23.01■■□□□ 1.27
LYSMD4-210ENST00000545021 RGS22Q8NE09 1264 aa23.01■■□□□ 1.27
LYSMD4-210ENST00000545021 TNNT1P13805 278 aa23.01■■□□□ 1.27
LYSMD4-210ENST00000545021 SPC24Q8NBT2 197 aa23.01■■□□□ 1.27
LYSMD4-210ENST00000545021 DDX17Q92841 729 aaKnown RBP23.01■■□□□ 1.27
LYSMD4-210ENST00000545021 CHMP4AQ9BY43 222 aa23.01■■□□□ 1.27
LYSMD4-210ENST00000545021 DCTPP1Q9H773 170 aa23.01■■□□□ 1.27
LYSMD4-210ENST00000545021 FEZ2Q9UHY8 353 aaPredicted RBP23.01■■□□□ 1.27
LYSMD4-210ENST00000545021 NAA30Q147X3 362 aaPredicted RBP23■■□□□ 1.27
LYSMD4-210ENST00000545021 KMT5BQ4FZB7 885 aa23■■□□□ 1.27
LYSMD4-210ENST00000545021 ZNF772Q68DY9 489 aaPredicted RBP23■■□□□ 1.27
LYSMD4-210ENST00000545021 KRT28Q7Z3Y7 464 aa23■■□□□ 1.27
LYSMD4-210ENST00000545021 PLEKHG3A1L390 1219 aa23■■□□□ 1.27
LYSMD4-210ENST00000545021 CYP2C19P33261 490 aa23■■□□□ 1.27
LYSMD4-210ENST00000545021 UBE2HP62256 183 aa23■■□□□ 1.27
LYSMD4-210ENST00000545021 C16orf45Q96MC5 204 aaPredicted RBP23■■□□□ 1.27
LYSMD4-210ENST00000545021 ATAD2Q6PL18 1390 aa23■■□□□ 1.27
LYSMD4-210ENST00000545021 RPAP1Q9BWH6 1393 aaPredicted RBP23■■□□□ 1.27
LYSMD4-210ENST00000545021 ABCC4O15439 1325 aa22.99■■□□□ 1.27
LYSMD4-210ENST00000545021 SAFB2Q14151 953 aaKnown RBP eCLIP22.99■■□□□ 1.27
LYSMD4-210ENST00000545021 NSD2O96028 1365 aa22.99■■□□□ 1.27
LYSMD4-210ENST00000545021 SLFNL1Q499Z3 407 aa22.99■■□□□ 1.27
LYSMD4-210ENST00000545021 FOXO3O43524 673 aa22.98■■□□□ 1.27
LYSMD4-210ENST00000545021 PTGS1P23219 599 aa22.98■■□□□ 1.27
LYSMD4-210ENST00000545021 ZFP91Q96JP5 570 aaPredicted RBP22.98■■□□□ 1.27
LYSMD4-210ENST00000545021 EFCC1Q9HA90 598 aa22.98■■□□□ 1.27
LYSMD4-210ENST00000545021 RTL1A6NKG5 1358 aa22.98■■□□□ 1.27
LYSMD4-210ENST00000545021 CDK19Q9BWU1 502 aa22.98■■□□□ 1.27
LYSMD4-210ENST00000545021 NWD2Q9ULI1 1742 aa22.97■■□□□ 1.27
LYSMD4-210ENST00000545021 NUDT16Q96DE0 195 aaKnown RBP22.97■■□□□ 1.27
LYSMD4-210ENST00000545021 KIF1BPQ96EK5 621 aa22.97■■□□□ 1.27
LYSMD4-210ENST00000545021 YY1AP1Q9H869 796 aa22.97■■□□□ 1.27
LYSMD4-210ENST00000545021 MRPL50Q8N5N7 158 aaKnown RBP22.96■■□□□ 1.27
LYSMD4-210ENST00000545021 AKAP12Q02952 1782 aa22.96■■□□□ 1.27
LYSMD4-210ENST00000545021 SOCS7O14512 581 aa22.96■■□□□ 1.27
LYSMD4-210ENST00000545021 MEX3CQ5U5Q3 659 aaKnown RBP22.96■■□□□ 1.27
LYSMD4-210ENST00000545021 PUS7Q96PZ0 661 aaKnown RBP22.96■■□□□ 1.27
LYSMD4-210ENST00000545021 TCHHQ07283 1943 aa22.95■■□□□ 1.26
LYSMD4-210ENST00000545021 RBM6P78332 1123 aaKnown RBP22.95■■□□□ 1.26
LYSMD4-210ENST00000545021 IFT57Q9NWB7 429 aa22.95■■□□□ 1.26
LYSMD4-210ENST00000545021 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.95■■□□□ 1.26
LYSMD4-210ENST00000545021 HNRNPH2P55795 449 aaKnown RBP22.94■■□□□ 1.26
LYSMD4-210ENST00000545021 C16orf71Q8IYS4 520 aaPredicted RBP22.94■■□□□ 1.26
LYSMD4-210ENST00000545021 FOXD4L6Q3SYB3 417 aaPredicted RBP22.94■■□□□ 1.26
LYSMD4-210ENST00000545021 FOXD4L3Q6VB84 417 aaPredicted RBP22.94■■□□□ 1.26
LYSMD4-210ENST00000545021 SLC12A5Q9H2X9 1139 aa22.94■■□□□ 1.26
LYSMD4-210ENST00000545021 CCDC61Q9Y6R9 512 aa22.94■■□□□ 1.26
LYSMD4-210ENST00000545021 KIF24Q5T7B8 1368 aa22.94■■□□□ 1.26
LYSMD4-210ENST00000545021 NOL10Q9BSC4 688 aaKnown RBP22.93■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 117.2 ms