RNA–Protein interactions for RNA: ENST00000544652.1

DDX11-227, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 5

Gene DDX11, Length 400 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-227ENST00000544652 GIGYF1O75420 1035 aaPredicted RBP16.97■□□□□ 0.31
DDX11-227ENST00000544652 BAG6P46379 1132 aa16.97■□□□□ 0.31
DDX11-227ENST00000544652 SLC27A3Q5K4L6 730 aa16.97■□□□□ 0.31
DDX11-227ENST00000544652 PROM2Q8N271 834 aa16.97■□□□□ 0.31
DDX11-227ENST00000544652 CAMKK2Q96RR4 588 aa16.97■□□□□ 0.31
DDX11-227ENST00000544652 HOXB7P09629 217 aa16.96■□□□□ 0.31
DDX11-227ENST00000544652 RBM42Q9BTD8 480 aaKnown RBP16.96■□□□□ 0.31
DDX11-227ENST00000544652 C4AP0C0L4 1744 aa16.96■□□□□ 0.3
DDX11-227ENST00000544652 SNRPA1P09661 255 aaKnown RBP16.95■□□□□ 0.3
DDX11-227ENST00000544652 TXNRD1Q16881 649 aa16.95■□□□□ 0.3
DDX11-227ENST00000544652 KRT24Q2M2I5 525 aa16.95■□□□□ 0.3
DDX11-227ENST00000544652 C8orf58Q8NAV2 365 aa16.95■□□□□ 0.3
DDX11-227ENST00000544652 ATP6V1AP38606 617 aa16.94■□□□□ 0.3
DDX11-227ENST00000544652 EN1Q05925 392 aaPredicted RBP16.94■□□□□ 0.3
DDX11-227ENST00000544652 EXOSC9Q06265 439 aaKnown RBP16.94■□□□□ 0.3
DDX11-227ENST00000544652 ITPK1Q13572 414 aa16.94■□□□□ 0.3
DDX11-227ENST00000544652 TEX13AQ9BXU3 409 aaPredicted RBP16.94■□□□□ 0.3
DDX11-227ENST00000544652 LRRC4BQ9NT99 713 aa16.94■□□□□ 0.3
DDX11-227ENST00000544652 CCNL1Q9UK58 526 aaPredicted RBP16.94■□□□□ 0.3
DDX11-227ENST00000544652 PRAMEF22A3QJZ6 481 aa16.93■□□□□ 0.3
DDX11-227ENST00000544652 EZH2Q15910 746 aaKnown RBP16.93■□□□□ 0.3
DDX11-227ENST00000544652 DEFB132Q7Z7B7 95 aa16.93■□□□□ 0.3
DDX11-227ENST00000544652 DNAJC10Q8IXB1 793 aa16.93■□□□□ 0.3
DDX11-227ENST00000544652 TSPYL6Q8N831 410 aa16.93■□□□□ 0.3
DDX11-227ENST00000544652 VAMP4O75379 141 aa16.92■□□□□ 0.3
DDX11-227ENST00000544652 HMGB2P26583 209 aaKnown RBP16.92■□□□□ 0.3
DDX11-227ENST00000544652 TWISTNBQ3B726 338 aaPredicted RBP16.92■□□□□ 0.3
DDX11-227ENST00000544652 USP16Q9Y5T5 823 aa16.92■□□□□ 0.3
DDX11-227ENST00000544652 BCORQ6W2J9 1755 aa16.92■□□□□ 0.3
DDX11-227ENST00000544652 CYP19A1P11511 503 aaPredicted RBP16.91■□□□□ 0.3
DDX11-227ENST00000544652 NUP98P52948 1817 aa16.91■□□□□ 0.3
DDX11-227ENST00000544652 CT47B1P0C2W7 299 aaPredicted RBP16.9■□□□□ 0.3
DDX11-227ENST00000544652 KCNQ4P56696 695 aa16.9■□□□□ 0.3
DDX11-227ENST00000544652 LINC00116Q8NCU8 138 aa16.9■□□□□ 0.3
DDX11-227ENST00000544652 CNTNAP4Q9C0A0 1308 aa16.9■□□□□ 0.3
DDX11-227ENST00000544652 ELL2O00472 640 aaPredicted RBP16.89■□□□□ 0.29
DDX11-227ENST00000544652 RC3H1Q5TC82 1133 aaKnown RBP16.89■□□□□ 0.29
DDX11-227ENST00000544652 ERBB4Q15303 1308 aa16.89■□□□□ 0.29
DDX11-227ENST00000544652 ANKRD36CQ5JPF3 1778 aa16.89■□□□□ 0.29
DDX11-227ENST00000544652 N4BP2Q86UW6 1770 aaPredicted RBP16.88■□□□□ 0.29
DDX11-227ENST00000544652 ARFGEF2Q9Y6D5 1785 aa16.88■□□□□ 0.29
DDX11-227ENST00000544652 STARD3NLO95772 234 aa16.88■□□□□ 0.29
DDX11-227ENST00000544652 ZNF428Q96B54 188 aa16.88■□□□□ 0.29
DDX11-227ENST00000544652 SCN7AQ01118 1682 aa16.88■□□□□ 0.29
DDX11-227ENST00000544652 HDGFL1Q5TGJ6 251 aa16.87■□□□□ 0.29
DDX11-227ENST00000544652 INTS5Q6P9B9 1019 aaKnown RBP16.87■□□□□ 0.29
DDX11-227ENST00000544652 CHMP4AQ9BY43 222 aa16.87■□□□□ 0.29
DDX11-227ENST00000544652 CRKLP46109 303 aaKnown RBP16.86■□□□□ 0.29
DDX11-227ENST00000544652 FBXO3Q9UK99 471 aa16.86■□□□□ 0.29
DDX11-227ENST00000544652 COL24A1Q17RW2 1714 aa16.85■□□□□ 0.29
DDX11-227ENST00000544652 CASZ1Q86V15 1759 aa16.85■□□□□ 0.29
DDX11-227ENST00000544652 SPDYE4A6NLX3 237 aa16.85■□□□□ 0.29
DDX11-227ENST00000544652 EIF2S2P20042 333 aaKnown RBP16.85■□□□□ 0.29
DDX11-227ENST00000544652 PDIA6Q15084 440 aa16.85■□□□□ 0.29
DDX11-227ENST00000544652 CCDC30Q5VVM6 783 aa16.85■□□□□ 0.29
DDX11-227ENST00000544652 AKT1S1Q96B36 256 aa16.85■□□□□ 0.29
DDX11-227ENST00000544652 CCDC87Q9NVE4 849 aa16.85■□□□□ 0.29
DDX11-227ENST00000544652 NBPF26B4DH59 902 aa16.84■□□□□ 0.29
DDX11-227ENST00000544652 A1BGP04217 495 aa16.84■□□□□ 0.29
DDX11-227ENST00000544652 NBPF14Q5TI25 921 aa16.84■□□□□ 0.29
DDX11-227ENST00000544652 NBPF10Q6P3W6 841 aaKnown RBP16.84■□□□□ 0.29
DDX11-227ENST00000544652 LRP10Q7Z4F1 713 aa16.84■□□□□ 0.29
DDX11-227ENST00000544652 NBPF15Q8N660 670 aa16.84■□□□□ 0.29
DDX11-227ENST00000544652 DDX21Q9NR30 783 aaKnown RBP eCLIP16.84■□□□□ 0.29
DDX11-227ENST00000544652 ZBTB1Q9Y2K1 713 aa16.84■□□□□ 0.29
DDX11-227ENST00000544652 IL6STP40189 918 aaPredicted RBP16.83■□□□□ 0.28
DDX11-227ENST00000544652 AFDNP55196 1824 aaKnown RBP16.83■□□□□ 0.28
DDX11-227ENST00000544652 ALDH1L2Q3SY69 923 aa16.83■□□□□ 0.28
DDX11-227ENST00000544652 DBF4Q9UBU7 674 aaPredicted RBP16.83■□□□□ 0.28
DDX11-227ENST00000544652 RPS6KA4O75676 772 aa16.82■□□□□ 0.28
DDX11-227ENST00000544652 EIF5P55010 431 aaKnown RBP16.82■□□□□ 0.28
DDX11-227ENST00000544652 ZNF827Q17R98 1081 aa16.82■□□□□ 0.28
DDX11-227ENST00000544652 NECTIN2Q92692 538 aa16.82■□□□□ 0.28
DDX11-227ENST00000544652 CHPF2Q9P2E5 772 aa16.82■□□□□ 0.28
DDX11-227ENST00000544652 SOCS7O14512 581 aa16.81■□□□□ 0.28
DDX11-227ENST00000544652 BRPF1P55201 1214 aaPredicted RBP16.81■□□□□ 0.28
DDX11-227ENST00000544652 PROSER3Q2NL68 480 aa16.81■□□□□ 0.28
DDX11-227ENST00000544652 AK7Q96M32 723 aa16.81■□□□□ 0.28
DDX11-227ENST00000544652 ANO8Q9HCE9 1232 aaPredicted RBP16.81■□□□□ 0.28
DDX11-227ENST00000544652 CANXP27824 592 aaKnown RBP16.8■□□□□ 0.28
DDX11-227ENST00000544652 RARSP54136 660 aaKnown RBP16.8■□□□□ 0.28
DDX11-227ENST00000544652 SLC15A2Q16348 729 aa16.8■□□□□ 0.28
DDX11-227ENST00000544652 SSH1Q8WYL5 1049 aa16.8■□□□□ 0.28
DDX11-227ENST00000544652 STK31Q9BXU1 1019 aa16.8■□□□□ 0.28
DDX11-227ENST00000544652 HYPKQ9NX55 129 aa16.8■□□□□ 0.28
DDX11-227ENST00000544652 COL15A1P39059 1388 aa16.79■□□□□ 0.28
DDX11-227ENST00000544652 GNPATO15228 680 aa16.79■□□□□ 0.28
DDX11-227ENST00000544652 SSFA2P28290 1259 aa16.79■□□□□ 0.28
DDX11-227ENST00000544652 PIP4K2AP48426 406 aaPredicted RBP16.79■□□□□ 0.28
DDX11-227ENST00000544652 AMIGO3Q86WK7 504 aa16.79■□□□□ 0.28
DDX11-227ENST00000544652 MRPL50Q8N5N7 158 aaKnown RBP16.79■□□□□ 0.28
DDX11-227ENST00000544652 RTCBQ9Y3I0 505 aaKnown RBP16.79■□□□□ 0.28
DDX11-227ENST00000544652 TCERG1O14776 1098 aaKnown RBP16.78■□□□□ 0.28
DDX11-227ENST00000544652 ANXA1P04083 346 aa16.78■□□□□ 0.28
DDX11-227ENST00000544652 MYL6BP14649 208 aa16.78■□□□□ 0.28
DDX11-227ENST00000544652 STK32BQ9NY57 414 aa16.78■□□□□ 0.28
DDX11-227ENST00000544652 PNPLA7Q6ZV29 1317 aa16.76■□□□□ 0.27
DDX11-227ENST00000544652 PHAXQ9H814 394 aaKnown RBP16.76■□□□□ 0.27
DDX11-227ENST00000544652 TFCP2L1Q9NZI6 479 aa16.76■□□□□ 0.27
DDX11-227ENST00000544652 RCAN3Q9UKA8 241 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms