RNA–Protein interactions for RNA: ENST00000543721.1

LMO3-229, Transcript of LIM domain only 3, humanhuman

TSL 2

Gene LMO3, Length 3,626 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-229ENST00000543721 GDPD2Q9HCC8 539 aa5.93□□□□□ -1.46
LMO3-229ENST00000543721 FAM53CQ9NYF3 392 aa5.93□□□□□ -1.46
LMO3-229ENST00000543721 ELP1O95163 1332 aa5.93□□□□□ -1.46
LMO3-229ENST00000543721 FAM177BA6PVY3 158 aa5.93□□□□□ -1.46
LMO3-229ENST00000543721 NRDCO43847 1150 aa5.93□□□□□ -1.46
LMO3-229ENST00000543721 PTGS1P23219 599 aa5.93□□□□□ -1.46
LMO3-229ENST00000543721 KRT85P78386 507 aa5.93□□□□□ -1.46
LMO3-229ENST00000543721 IRX5P78411 483 aaPredicted RBP5.93□□□□□ -1.46
LMO3-229ENST00000543721 PTPN14Q15678 1187 aa5.93□□□□□ -1.46
LMO3-229ENST00000543721 CCDC186Q7Z3E2 898 aa5.93□□□□□ -1.46
LMO3-229ENST00000543721 MPNDQ8N594 471 aa5.93□□□□□ -1.46
LMO3-229ENST00000543721 TRIM5Q9C035 493 aa5.93□□□□□ -1.46
LMO3-229ENST00000543721 LRRCC1Q9C099 1032 aa5.93□□□□□ -1.46
LMO3-229ENST00000543721 KNDC1Q76NI1 1749 aa5.93□□□□□ -1.46
LMO3-229ENST00000543721 TULP2O00295 520 aa5.93□□□□□ -1.46
LMO3-229ENST00000543721 SMARCA5O60264 1052 aaPredicted RBP5.93□□□□□ -1.46
LMO3-229ENST00000543721 TPM4P67936 248 aa5.93□□□□□ -1.46
LMO3-229ENST00000543721 GIMAP6Q6P9H5 292 aa5.93□□□□□ -1.46
LMO3-229ENST00000543721 AFAP1Q8N556 730 aa5.93□□□□□ -1.46
LMO3-229ENST00000543721 TDRD7Q8NHU6 1098 aaKnown RBP5.93□□□□□ -1.46
LMO3-229ENST00000543721 CABP2Q9NPB3 220 aa5.93□□□□□ -1.46
LMO3-229ENST00000543721 UGGT1Q9NYU2 1555 aa5.93□□□□□ -1.46
LMO3-229ENST00000543721 MROH1Q8NDA8 1641 aa5.93□□□□□ -1.46
LMO3-229ENST00000543721 GOLGA6L4A6NEF3 574 aa5.92□□□□□ -1.46
LMO3-229ENST00000543721 FIBPO43427 364 aa5.92□□□□□ -1.46
LMO3-229ENST00000543721 GNAI3P08754 354 aa5.92□□□□□ -1.46
LMO3-229ENST00000543721 SYT1P21579 422 aa5.92□□□□□ -1.46
LMO3-229ENST00000543721 ZNF75DP51815 510 aa5.92□□□□□ -1.46
LMO3-229ENST00000543721 TYRO3Q06418 890 aa5.92□□□□□ -1.46
LMO3-229ENST00000543721 GPS2Q13227 327 aa5.92□□□□□ -1.46
LMO3-229ENST00000543721 ZSCAN25Q6NSZ9 544 aa5.92□□□□□ -1.46
LMO3-229ENST00000543721 CTR9Q6PD62 1173 aa5.92□□□□□ -1.46
LMO3-229ENST00000543721 OTUD7AQ8TE49 926 aaPredicted RBP5.92□□□□□ -1.46
LMO3-229ENST00000543721 CHAMP1Q96JM3 812 aa5.92□□□□□ -1.46
LMO3-229ENST00000543721 C16orf45Q96MC5 204 aaPredicted RBP5.92□□□□□ -1.46
LMO3-229ENST00000543721 SCAND2PQ9GZW5 306 aaPredicted RBP5.92□□□□□ -1.46
LMO3-229ENST00000543721 KCND1Q9NSA2 647 aa5.92□□□□□ -1.46
LMO3-229ENST00000543721 ARGLU1Q9NWB6 273 aaPredicted RBP5.92□□□□□ -1.46
LMO3-229ENST00000543721 ATP8B1O43520 1251 aa5.92□□□□□ -1.46
LMO3-229ENST00000543721 SLU7O95391 586 aaKnown RBP5.92□□□□□ -1.46
LMO3-229ENST00000543721 GNAI2P04899 355 aa5.92□□□□□ -1.46
LMO3-229ENST00000543721 TPM1P09493 284 aa5.92□□□□□ -1.46
LMO3-229ENST00000543721 C8orf58Q8NAV2 365 aa5.92□□□□□ -1.46
LMO3-229ENST00000543721 NOL10Q9BSC4 688 aaKnown RBP5.92□□□□□ -1.46
LMO3-229ENST00000543721 CDK12Q9NYV4 1490 aaPredicted RBP5.92□□□□□ -1.46
LMO3-229ENST00000543721 RIMS2Q9UQ26 1411 aa5.92□□□□□ -1.46
LMO3-229ENST00000543721 ARHGEF40Q8TER5 1519 aa5.92□□□□□ -1.46
LMO3-229ENST00000543721 TRIM6-TRIM34B2RNG4 842 aa5.92□□□□□ -1.46
LMO3-229ENST00000543721 ELL2O00472 640 aaPredicted RBP5.92□□□□□ -1.46
LMO3-229ENST00000543721 RBM6P78332 1123 aaKnown RBP5.92□□□□□ -1.46
LMO3-229ENST00000543721 TMEM132EQ6IEE7 984 aa5.92□□□□□ -1.46
LMO3-229ENST00000543721 PLA2G4DQ86XP0 818 aa5.92□□□□□ -1.46
LMO3-229ENST00000543721 TXLNBQ8N3L3 684 aa5.92□□□□□ -1.46
LMO3-229ENST00000543721 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.92□□□□□ -1.46
LMO3-229ENST00000543721 EFCC1Q9HA90 598 aa5.92□□□□□ -1.46
LMO3-229ENST00000543721 KIF20BQ96Q89 1820 aa5.91□□□□□ -1.46
LMO3-229ENST00000543721 CLTCQ00610 1675 aaKnown RBP5.91□□□□□ -1.46
LMO3-229ENST00000543721 GSDMDP57764 484 aa5.91□□□□□ -1.46
LMO3-229ENST00000543721 RUFY2Q8WXA3 655 aa5.91□□□□□ -1.46
LMO3-229ENST00000543721 TNMDQ9H2S6 317 aa5.91□□□□□ -1.46
LMO3-229ENST00000543721 CWC15Q9P013 229 aaKnown RBP5.91□□□□□ -1.46
LMO3-229ENST00000543721 V9GYY5 206 aaPredicted RBP5.91□□□□□ -1.46
LMO3-229ENST00000543721 NPHP3Q7Z494 1330 aa5.91□□□□□ -1.46
LMO3-229ENST00000543721 SALL3Q9BXA9 1300 aa5.91□□□□□ -1.46
LMO3-229ENST00000543721 GOLGA6L19H0YKK7 550 aa5.91□□□□□ -1.46
LMO3-229ENST00000543721 CTAGE5O15320 804 aa5.91□□□□□ -1.46
LMO3-229ENST00000543721 CCP110O43303 1012 aa5.91□□□□□ -1.46
LMO3-229ENST00000543721 IGSF3O75054 1194 aa5.91□□□□□ -1.46
LMO3-229ENST00000543721 SARM1Q6SZW1 724 aa5.91□□□□□ -1.46
LMO3-229ENST00000543721 NOL8Q76FK4 1167 aaKnown RBP5.91□□□□□ -1.46
LMO3-229ENST00000543721 FILIP1Q7Z7B0 1213 aa5.91□□□□□ -1.46
LMO3-229ENST00000543721 RILPL2Q969X0 211 aa5.91□□□□□ -1.46
LMO3-229ENST00000543721 KIF1BPQ96EK5 621 aa5.91□□□□□ -1.46
LMO3-229ENST00000543721 MRFAP1L1Q96HT8 127 aa5.91□□□□□ -1.46
LMO3-229ENST00000543721 TM6SF1Q9BZW5 370 aa5.91□□□□□ -1.46
LMO3-229ENST00000543721 CLIP2Q9UDT6 1046 aa5.91□□□□□ -1.46
LMO3-229ENST00000543721 ARHGEF10O15013 1369 aa5.91□□□□□ -1.46
LMO3-229ENST00000543721 RAD50Q92878 1312 aa5.91□□□□□ -1.46
LMO3-229ENST00000543721 TCHHQ07283 1943 aa5.91□□□□□ -1.46
LMO3-229ENST00000543721 APBB1O00213 710 aa5.91□□□□□ -1.46
LMO3-229ENST00000543721 RAB11FIP3O75154 756 aa5.91□□□□□ -1.46
LMO3-229ENST00000543721 CYP2C19P33261 490 aa5.91□□□□□ -1.46
LMO3-229ENST00000543721 FOXD4L6Q3SYB3 417 aaPredicted RBP5.91□□□□□ -1.46
LMO3-229ENST00000543721 FOXD4L3Q6VB84 417 aaPredicted RBP5.91□□□□□ -1.46
LMO3-229ENST00000543721 PALD1Q9ULE6 856 aa5.91□□□□□ -1.46
LMO3-229ENST00000543721 MRVI1Q9Y6F6 885 aa5.91□□□□□ -1.46
LMO3-229ENST00000543721 MSH6P52701 1360 aa5.9□□□□□ -1.46
LMO3-229ENST00000543721 AATKQ6ZMQ8 1374 aa5.9□□□□□ -1.46
LMO3-229ENST00000543721 RBM43Q6ZSC3 357 aaKnown RBP5.9□□□□□ -1.46
LMO3-229ENST00000543721 TTC14Q96N46 770 aa5.9□□□□□ -1.46
LMO3-229ENST00000543721 UPF3BQ9BZI7 483 aaKnown RBP5.9□□□□□ -1.46
LMO3-229ENST00000543721 POLKQ9UBT6 870 aa5.9□□□□□ -1.46
LMO3-229ENST00000543721 AP5Z1O43299 807 aa5.9□□□□□ -1.47
LMO3-229ENST00000543721 MUM1L1Q5H9M0 696 aa5.9□□□□□ -1.47
LMO3-229ENST00000543721 VPS53Q5VIR6 699 aa5.9□□□□□ -1.47
LMO3-229ENST00000543721 DHX37Q8IY37 1157 aaKnown RBP5.9□□□□□ -1.47
LMO3-229ENST00000543721 MEIS3Q99687 375 aa5.9□□□□□ -1.47
LMO3-229ENST00000543721 SRRTQ9BXP5 876 aaKnown RBP5.9□□□□□ -1.47
LMO3-229ENST00000543721 BCL11BQ9C0K0 894 aaPredicted RBP5.9□□□□□ -1.47
LMO3-229ENST00000543721 CBX8Q9HC52 389 aa5.9□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms