RNA–Protein interactions for RNA: ENST00000543627.1

DDB1-222, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-222ENST00000543627 A1BGP04217 495 aa14.5□□□□□ -0.09
DDB1-222ENST00000543627 PIP4K2AP48426 406 aaPredicted RBP14.5□□□□□ -0.09
DDB1-222ENST00000543627 PNISRQ8TF01 805 aaKnown RBP14.5□□□□□ -0.09
DDB1-222ENST00000543627 SGIP1Q9BQI5 828 aa14.5□□□□□ -0.09
DDB1-222ENST00000543627 SYT17Q9BSW7 474 aa14.5□□□□□ -0.09
DDB1-222ENST00000543627 TEX13AQ9BXU3 409 aaPredicted RBP14.5□□□□□ -0.09
DDB1-222ENST00000543627 TSPYL4Q9UJ04 414 aa14.5□□□□□ -0.09
DDB1-222ENST00000543627 SNRPA1P09661 255 aaKnown RBP14.49□□□□□ -0.09
DDB1-222ENST00000543627 FAM9BQ8IZU0 186 aa14.49□□□□□ -0.09
DDB1-222ENST00000543627 SALL2Q9Y467 1007 aaPredicted RBP14.49□□□□□ -0.09
DDB1-222ENST00000543627 USP16Q9Y5T5 823 aa14.49□□□□□ -0.09
DDB1-222ENST00000543627 KCPQ6ZWJ8 1503 aa14.49□□□□□ -0.09
DDB1-222ENST00000543627 ADAMTS7Q9UKP4 1686 aa14.49□□□□□ -0.09
DDB1-222ENST00000543627 DLG5Q8TDM6 1919 aa14.49□□□□□ -0.09
DDB1-222ENST00000543627 UBR3Q6ZT12 1888 aa14.48□□□□□ -0.09
DDB1-222ENST00000543627 ADRA2BP18089 450 aa14.48□□□□□ -0.09
DDB1-222ENST00000543627 USPL1Q5W0Q7 1092 aa14.48□□□□□ -0.09
DDB1-222ENST00000543627 QSER1Q2KHR3 1735 aa14.48□□□□□ -0.09
DDB1-222ENST00000543627 MMP10P09238 476 aa14.47□□□□□ -0.09
DDB1-222ENST00000543627 NLGN1Q8N2Q7 840 aa14.47□□□□□ -0.09
DDB1-222ENST00000543627 NGEFQ8N5V2 710 aa14.47□□□□□ -0.09
DDB1-222ENST00000543627 WWC3Q9ULE0 1092 aa14.47□□□□□ -0.09
DDB1-222ENST00000543627 TJP1Q07157 1748 aa14.46□□□□□ -0.09
DDB1-222ENST00000543627 MYH14Q7Z406 1995 aaKnown RBP14.46□□□□□ -0.09
DDB1-222ENST00000543627 GYS1P13807 737 aa14.46□□□□□ -0.09
DDB1-222ENST00000543627 TBC1D2BQ9UPU7 963 aa14.46□□□□□ -0.09
DDB1-222ENST00000543627 PARP3Q9Y6F1 533 aa14.46□□□□□ -0.09
DDB1-222ENST00000543627 SOS1Q07889 1333 aaPredicted RBP14.45□□□□□ -0.1
DDB1-222ENST00000543627 EIF2S2P20042 333 aaKnown RBP14.45□□□□□ -0.1
DDB1-222ENST00000543627 COL5A3P25940 1745 aaPredicted RBP14.45□□□□□ -0.1
DDB1-222ENST00000543627 FKBP8Q14318 412 aa14.45□□□□□ -0.1
DDB1-222ENST00000543627 BICDL1Q6ZP65 573 aa14.45□□□□□ -0.1
DDB1-222ENST00000543627 TRIM35Q9UPQ4 493 aa14.45□□□□□ -0.1
DDB1-222ENST00000543627 SIPA1L3O60292 1781 aaPredicted RBP14.45□□□□□ -0.1
DDB1-222ENST00000543627 EIF4A1P60842 406 aaKnown RBP14.44□□□□□ -0.1
DDB1-222ENST00000543627 GPR162Q16538 588 aa14.44□□□□□ -0.1
DDB1-222ENST00000543627 NLGN2Q8NFZ4 835 aa14.44□□□□□ -0.1
DDB1-222ENST00000543627 NECTIN2Q92692 538 aa14.44□□□□□ -0.1
DDB1-222ENST00000543627 COL15A1P39059 1388 aa14.44□□□□□ -0.1
DDB1-222ENST00000543627 USP42Q9H9J4 1324 aaKnown RBP14.43□□□□□ -0.1
DDB1-222ENST00000543627 ZNF831Q5JPB2 1677 aa14.43□□□□□ -0.1
DDB1-222ENST00000543627 A0A087WZG4 1122 aa14.43□□□□□ -0.1
DDB1-222ENST00000543627 MYL6BP14649 208 aa14.43□□□□□ -0.1
DDB1-222ENST00000543627 NARFQ9UHQ1 456 aa14.43□□□□□ -0.1
DDB1-222ENST00000543627 GIGYF1O75420 1035 aaPredicted RBP14.42□□□□□ -0.1
DDB1-222ENST00000543627 IL6STP40189 918 aaPredicted RBP14.42□□□□□ -0.1
DDB1-222ENST00000543627 EIF5P55010 431 aaKnown RBP14.42□□□□□ -0.1
DDB1-222ENST00000543627 UBR2Q8IWV8 1755 aa14.42□□□□□ -0.1
DDB1-222ENST00000543627 DZIP3Q86Y13 1208 aaKnown RBP14.41□□□□□ -0.1
DDB1-222ENST00000543627 NPHP1O15259 732 aa14.4□□□□□ -0.1
DDB1-222ENST00000543627 KRT24Q2M2I5 525 aa14.4□□□□□ -0.1
DDB1-222ENST00000543627 CD2APQ9Y5K6 639 aa14.39□□□□□ -0.11
DDB1-222ENST00000543627 FAM177BA6PVY3 158 aa14.38□□□□□ -0.11
DDB1-222ENST00000543627 NBPF26B4DH59 902 aa14.38□□□□□ -0.11
DDB1-222ENST00000543627 ELL2O00472 640 aaPredicted RBP14.38□□□□□ -0.11
DDB1-222ENST00000543627 CHL1O00533 1208 aa14.38□□□□□ -0.11
DDB1-222ENST00000543627 CALD1Q05682 793 aaKnown RBP14.38□□□□□ -0.11
DDB1-222ENST00000543627 NFIXQ14938 502 aa14.38□□□□□ -0.11
DDB1-222ENST00000543627 NBPF10Q6P3W6 841 aaKnown RBP14.38□□□□□ -0.11
DDB1-222ENST00000543627 NBPF15Q8N660 670 aa14.38□□□□□ -0.11
DDB1-222ENST00000543627 A0A0G2JLW4 131 aa14.37□□□□□ -0.11
DDB1-222ENST00000543627 ANXA1P04083 346 aa14.37□□□□□ -0.11
DDB1-222ENST00000543627 DDR1Q08345 913 aa14.37□□□□□ -0.11
DDB1-222ENST00000543627 TBC1D9BQ66K14 1250 aa14.37□□□□□ -0.11
DDB1-222ENST00000543627 CCDC24Q8N4L8 307 aa14.37□□□□□ -0.11
DDB1-222ENST00000543627 CFAP44Q96MT7 982 aa14.37□□□□□ -0.11
DDB1-222ENST00000543627 BCL2L12Q9HB09 334 aa14.37□□□□□ -0.11
DDB1-222ENST00000543627 MBIPQ9NS73 344 aa14.37□□□□□ -0.11
DDB1-222ENST00000543627 BABAM1Q9NWV8 329 aa14.37□□□□□ -0.11
DDB1-222ENST00000543627 C4AP0C0L4 1744 aa14.37□□□□□ -0.11
DDB1-222ENST00000543627 POLRMTO00411 1230 aaKnown RBP14.36□□□□□ -0.11
DDB1-222ENST00000543627 SERPINB2P05120 415 aa14.36□□□□□ -0.11
DDB1-222ENST00000543627 TM4SF1P30408 202 aa14.36□□□□□ -0.11
DDB1-222ENST00000543627 GNAI1P63096 354 aa14.36□□□□□ -0.11
DDB1-222ENST00000543627 AIMP1Q12904 312 aaKnown RBP14.36□□□□□ -0.11
DDB1-222ENST00000543627 DIEXFQ68CQ4 756 aaKnown RBP14.36□□□□□ -0.11
DDB1-222ENST00000543627 SETDB2Q96T68 719 aa14.36□□□□□ -0.11
DDB1-222ENST00000543627 CICQ96RK0 1608 aaPredicted RBP14.35□□□□□ -0.11
DDB1-222ENST00000543627 CAMTA2O94983 1202 aa14.35□□□□□ -0.11
DDB1-222ENST00000543627 KIF6Q6ZMV9 814 aa14.35□□□□□ -0.11
DDB1-222ENST00000543627 KDM3BQ7LBC6 1761 aa14.34□□□□□ -0.11
DDB1-222ENST00000543627 DUSP27Q5VZP5 1158 aa14.34□□□□□ -0.11
DDB1-222ENST00000543627 TTLL7Q6ZT98 887 aa14.34□□□□□ -0.11
DDB1-222ENST00000543627 TSR2Q969E8 191 aaKnown RBP14.34□□□□□ -0.11
DDB1-222ENST00000543627 ZBTB3Q9H5J0 574 aa14.34□□□□□ -0.11
DDB1-222ENST00000543627 IFT57Q9NWB7 429 aa14.34□□□□□ -0.11
DDB1-222ENST00000543627 ZNF652Q9Y2D9 606 aa14.34□□□□□ -0.11
DDB1-222ENST00000543627 COL24A1Q17RW2 1714 aa14.33□□□□□ -0.12
DDB1-222ENST00000543627 DPEP1P16444 411 aa14.33□□□□□ -0.12
DDB1-222ENST00000543627 HLFQ16534 295 aa14.33□□□□□ -0.12
DDB1-222ENST00000543627 HDGFL1Q5TGJ6 251 aa14.33□□□□□ -0.12
DDB1-222ENST00000543627 WWC1Q8IX03 1113 aa14.33□□□□□ -0.12
DDB1-222ENST00000543627 NIP7Q9Y221 180 aaKnown RBP eCLIP14.33□□□□□ -0.12
DDB1-222ENST00000543627 YBX3P16989 372 aaKnown RBP eCLIP14.32□□□□□ -0.122e-11■■□□□ 12.5
DDB1-222ENST00000543627 GTF2E1P29083 439 aaPredicted RBP14.32□□□□□ -0.12
DDB1-222ENST00000543627 CHRNA5P30532 468 aa14.32□□□□□ -0.12
DDB1-222ENST00000543627 PROSER3Q2NL68 480 aa14.32□□□□□ -0.12
DDB1-222ENST00000543627 BCS1LQ9Y276 419 aa14.32□□□□□ -0.12
DDB1-222ENST00000543627 ZNF853P0CG23 659 aa14.31□□□□□ -0.12
DDB1-222ENST00000543627 GPTP24298 496 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms