RNA–Protein interactions for RNA: ENST00000542462.1

PTPN6-217, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 4

Gene PTPN6, Length 570 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-217ENST00000542462 DDR1Q08345 913 aa22.04■■□□□ 1.12
PTPN6-217ENST00000542462 MYBBP1AQ9BQG0 1328 aaKnown RBP22.04■■□□□ 1.12
PTPN6-217ENST00000542462 ZPR1O75312 459 aa22.03■■□□□ 1.12
PTPN6-217ENST00000542462 A1BGP04217 495 aa22.03■■□□□ 1.12
PTPN6-217ENST00000542462 EIF5P55010 431 aaKnown RBP22.03■■□□□ 1.12
PTPN6-217ENST00000542462 NFE2L2Q16236 605 aa22.03■■□□□ 1.12
PTPN6-217ENST00000542462 BCL2L12Q9HB09 334 aa22.03■■□□□ 1.12
PTPN6-217ENST00000542462 NARFQ9UHQ1 456 aa22.03■■□□□ 1.12
PTPN6-217ENST00000542462 USP16Q9Y5T5 823 aa22.03■■□□□ 1.12
PTPN6-217ENST00000542462 PARP3Q9Y6F1 533 aa22.03■■□□□ 1.12
PTPN6-217ENST00000542462 TAF7Q15545 349 aaPredicted RBP22.02■■□□□ 1.12
PTPN6-217ENST00000542462 THUMPD2Q9BTF0 503 aaKnown RBP22.02■■□□□ 1.12
PTPN6-217ENST00000542462 TEX13AQ9BXU3 409 aaPredicted RBP22.02■■□□□ 1.12
PTPN6-217ENST00000542462 VIRMAQ69YN4 1812 aaKnown RBP22.01■■□□□ 1.11
PTPN6-217ENST00000542462 A0A0G2JLW4 131 aa22.01■■□□□ 1.11
PTPN6-217ENST00000542462 ZEB1P37275 1124 aaPredicted RBP22.01■■□□□ 1.11
PTPN6-217ENST00000542462 COL15A1P39059 1388 aa22■■□□□ 1.11
PTPN6-217ENST00000542462 UBR2Q8IWV8 1755 aa22■■□□□ 1.11
PTPN6-217ENST00000542462 NEFMP07197 916 aa22■■□□□ 1.11
PTPN6-217ENST00000542462 PRKRIP1Q9H875 184 aaPredicted RBP22■■□□□ 1.11
PTPN6-217ENST00000542462 SIPA1L3O60292 1781 aaPredicted RBP21.99■■□□□ 1.11
PTPN6-217ENST00000542462 POLRMTO00411 1230 aaKnown RBP21.99■■□□□ 1.11
PTPN6-217ENST00000542462 GRIN3BO60391 1043 aa21.99■■□□□ 1.11
PTPN6-217ENST00000542462 PNNQ9H307 717 aaKnown RBP21.99■■□□□ 1.11
PTPN6-217ENST00000542462 PIP4K2AP48426 406 aaPredicted RBP21.98■■□□□ 1.11
PTPN6-217ENST00000542462 TGFB2P61812 414 aa21.98■■□□□ 1.11
PTPN6-217ENST00000542462 NFIXQ14938 502 aa21.98■■□□□ 1.11
PTPN6-217ENST00000542462 C4AP0C0L4 1744 aa21.97■■□□□ 1.11
PTPN6-217ENST00000542462 SNRPA1P09661 255 aaKnown RBP21.97■■□□□ 1.11
PTPN6-217ENST00000542462 DPEP1P16444 411 aa21.97■■□□□ 1.11
PTPN6-217ENST00000542462 ZNF784Q8NCA9 323 aaPredicted RBP21.97■■□□□ 1.11
PTPN6-217ENST00000542462 TBC1D2BQ9UPU7 963 aa21.97■■□□□ 1.11
PTPN6-217ENST00000542462 MAPK8IP3Q9UPT6 1336 aa21.97■■□□□ 1.11
PTPN6-217ENST00000542462 CCDC146Q8IYE0 955 aa21.96■■□□□ 1.11
PTPN6-217ENST00000542462 ZNF330Q9Y3S2 320 aaPredicted RBP21.96■■□□□ 1.11
PTPN6-217ENST00000542462 C10orf71Q711Q0 1435 aa21.96■■□□□ 1.11
PTPN6-217ENST00000542462 PXDNLA1KZ92 1463 aa21.96■■□□□ 1.11
PTPN6-217ENST00000542462 A0A087WZG4 1122 aa21.95■■□□□ 1.1
PTPN6-217ENST00000542462 KCNA3P22001 575 aa21.95■■□□□ 1.1
PTPN6-217ENST00000542462 IL6STP40189 918 aaPredicted RBP21.95■■□□□ 1.1
PTPN6-217ENST00000542462 RIPK4P57078 832 aa21.95■■□□□ 1.1
PTPN6-217ENST00000542462 ADAMTS8Q9UP79 889 aa21.94■■□□□ 1.1
PTPN6-217ENST00000542462 NBPF26B4DH59 902 aa21.93■■□□□ 1.1
PTPN6-217ENST00000542462 TMPOP42166 694 aaKnown RBP21.93■■□□□ 1.1
PTPN6-217ENST00000542462 NBPF10Q6P3W6 841 aaKnown RBP21.93■■□□□ 1.1
PTPN6-217ENST00000542462 NBPF15Q8N660 670 aa21.93■■□□□ 1.1
PTPN6-217ENST00000542462 RRP7AQ9Y3A4 280 aaKnown RBP21.93■■□□□ 1.1
PTPN6-217ENST00000542462 TBC1D9BQ66K14 1250 aa21.92■■□□□ 1.1
PTPN6-217ENST00000542462 BICDL1Q6ZP65 573 aa21.92■■□□□ 1.1
PTPN6-217ENST00000542462 CAMTA2O94983 1202 aa21.91■■□□□ 1.1
PTPN6-217ENST00000542462 SERPINB2P05120 415 aa21.91■■□□□ 1.1
PTPN6-217ENST00000542462 EIF4A1P60842 406 aaKnown RBP21.91■■□□□ 1.1
PTPN6-217ENST00000542462 PNISRQ8TF01 805 aaKnown RBP21.91■■□□□ 1.1
PTPN6-217ENST00000542462 CHRNA5P30532 468 aa21.9■■□□□ 1.1
PTPN6-217ENST00000542462 GIGYF1O75420 1035 aaPredicted RBP21.89■■□□□ 1.09
PTPN6-217ENST00000542462 WDR43Q15061 677 aaKnown RBP eCLIP21.89■■□□□ 1.09
PTPN6-217ENST00000542462 NEUROD2Q15784 382 aa21.89■■□□□ 1.09
PTPN6-217ENST00000542462 BCS1LQ9Y276 419 aa21.89■■□□□ 1.09
PTPN6-217ENST00000542462 RUNDC1Q96C34 613 aa21.88■■□□□ 1.09
PTPN6-217ENST00000542462 DZIP3Q86Y13 1208 aaKnown RBP21.87■■□□□ 1.09
PTPN6-217ENST00000542462 KIAA1551Q9HCM1 1747 aa21.86■■□□□ 1.09
PTPN6-217ENST00000542462 KIF13BQ9NQT8 1826 aa21.86■■□□□ 1.09
PTPN6-217ENST00000542462 ZNF316A6NFI3 1004 aaPredicted RBP21.86■■□□□ 1.09
PTPN6-217ENST00000542462 TRIM35Q9UPQ4 493 aa21.86■■□□□ 1.09
PTPN6-217ENST00000542462 CCDC184Q52MB2 194 aa21.85■■□□□ 1.09
PTPN6-217ENST00000542462 NPM2Q86SE8 214 aaKnown RBP21.85■■□□□ 1.09
PTPN6-217ENST00000542462 CCDC24Q8N4L8 307 aa21.85■■□□□ 1.09
PTPN6-217ENST00000542462 PIM2Q9P1W9 311 aa21.85■■□□□ 1.09
PTPN6-217ENST00000542462 TSPYL4Q9UJ04 414 aa21.84■■□□□ 1.09
PTPN6-217ENST00000542462 DLG5Q8TDM6 1919 aa21.84■■□□□ 1.09
PTPN6-217ENST00000542462 N4BP2Q86UW6 1770 aaPredicted RBP21.83■■□□□ 1.09
PTPN6-217ENST00000542462 DALRD3Q5D0E6 543 aaKnown RBP21.82■■□□□ 1.08
PTPN6-217ENST00000542462 ARHGAP27Q6ZUM4 889 aa21.82■■□□□ 1.08
PTPN6-217ENST00000542462 NGEFQ8N5V2 710 aa21.82■■□□□ 1.08
PTPN6-217ENST00000542462 CARMIL3Q8ND23 1372 aa21.82■■□□□ 1.08
PTPN6-217ENST00000542462 CHD4Q14839 1912 aa21.82■■□□□ 1.08
PTPN6-217ENST00000542462 LMOD3Q0VAK6 560 aa21.81■■□□□ 1.08
PTPN6-217ENST00000542462 PRR5LQ6MZQ0 368 aa21.81■■□□□ 1.08
PTPN6-217ENST00000542462 SETDB2Q96T68 719 aa21.81■■□□□ 1.08
PTPN6-217ENST00000542462 HLFQ16534 295 aa21.8■■□□□ 1.08
PTPN6-217ENST00000542462 CLEC4GQ6UXB4 293 aa21.8■■□□□ 1.08
PTPN6-217ENST00000542462 BABAM1Q9NWV8 329 aa21.8■■□□□ 1.08
PTPN6-217ENST00000542462 CHL1O00533 1208 aa21.79■■□□□ 1.08
PTPN6-217ENST00000542462 C2CD5Q86YS7 1000 aa21.79■■□□□ 1.08
PTPN6-217ENST00000542462 MYL6BP14649 208 aa21.78■■□□□ 1.08
PTPN6-217ENST00000542462 APAF1O14727 1248 aa21.77■■□□□ 1.08
PTPN6-217ENST00000542462 KRT24Q2M2I5 525 aa21.77■■□□□ 1.08
PTPN6-217ENST00000542462 TTLL7Q6ZT98 887 aa21.77■■□□□ 1.08
PTPN6-217ENST00000542462 BRIP1Q9BX63 1249 aa21.77■■□□□ 1.08
PTPN6-217ENST00000542462 LAS1LQ9Y4W2 734 aaKnown RBP21.77■■□□□ 1.08
PTPN6-217ENST00000542462 NRXN2Q9P2S2 1712 aa21.77■■□□□ 1.08
PTPN6-217ENST00000542462 KDM3BQ7LBC6 1761 aa21.76■■□□□ 1.07
PTPN6-217ENST00000542462 EIF2S2P20042 333 aaKnown RBP21.76■■□□□ 1.07
PTPN6-217ENST00000542462 PDIA6Q15084 440 aa21.76■■□□□ 1.07
PTPN6-217ENST00000542462 ATP10DQ9P241 1426 aa21.76■■□□□ 1.07
PTPN6-217ENST00000542462 ADCY9O60503 1353 aa21.75■■□□□ 1.07
PTPN6-217ENST00000542462 H0YIN7 160 aa21.75■■□□□ 1.07
PTPN6-217ENST00000542462 AFDNP55196 1824 aaKnown RBP21.75■■□□□ 1.07
PTPN6-217ENST00000542462 PROSER3Q2NL68 480 aa21.74■■□□□ 1.07
PTPN6-217ENST00000542462 LRP10Q7Z4F1 713 aa21.74■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms