RNA–Protein interactions for RNA: ENST00000542346.1

PHC1-211, Transcript of polyhomeotic homolog 1, humanhuman

TSL 5

Gene PHC1, Length 483 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC1-211ENST00000542346 USP16Q9Y5T5 823 aa16.78■□□□□ 0.28
PHC1-211ENST00000542346 C4BP0C0L5 1744 aa16.78■□□□□ 0.28
PHC1-211ENST00000542346 VAMP4O75379 141 aa16.77■□□□□ 0.28
PHC1-211ENST00000542346 CT47B1P0C2W7 299 aaPredicted RBP16.77■□□□□ 0.28
PHC1-211ENST00000542346 KCNQ4P56696 695 aa16.77■□□□□ 0.28
PHC1-211ENST00000542346 EN1Q05925 392 aaPredicted RBP16.77■□□□□ 0.28
PHC1-211ENST00000542346 CYP19A1P11511 503 aaPredicted RBP16.76■□□□□ 0.27
PHC1-211ENST00000542346 EZH2Q15910 746 aaKnown RBP16.76■□□□□ 0.27
PHC1-211ENST00000542346 LINC00116Q8NCU8 138 aa16.75■□□□□ 0.27
PHC1-211ENST00000542346 UBR3Q6ZT12 1888 aa16.74■□□□□ 0.27
PHC1-211ENST00000542346 STARD3NLO95772 234 aa16.74■□□□□ 0.27
PHC1-211ENST00000542346 HDGFL1Q5TGJ6 251 aa16.74■□□□□ 0.27
PHC1-211ENST00000542346 TUBGCP6Q96RT7 1819 aa16.73■□□□□ 0.27
PHC1-211ENST00000542346 EIF2S2P20042 333 aaKnown RBP16.73■□□□□ 0.27
PHC1-211ENST00000542346 ZNF428Q96B54 188 aa16.73■□□□□ 0.27
PHC1-211ENST00000542346 CHMP4AQ9BY43 222 aa16.73■□□□□ 0.27
PHC1-211ENST00000542346 ERBB4Q15303 1308 aa16.72■□□□□ 0.27
PHC1-211ENST00000542346 CNTNAP4Q9C0A0 1308 aa16.72■□□□□ 0.27
PHC1-211ENST00000542346 HMGB2P26583 209 aaKnown RBP16.72■□□□□ 0.27
PHC1-211ENST00000542346 CRKLP46109 303 aaKnown RBP16.72■□□□□ 0.27
PHC1-211ENST00000542346 CCDC30Q5VVM6 783 aa16.72■□□□□ 0.27
PHC1-211ENST00000542346 INTS5Q6P9B9 1019 aaKnown RBP16.72■□□□□ 0.27
PHC1-211ENST00000542346 NECTIN2Q92692 538 aa16.72■□□□□ 0.27
PHC1-211ENST00000542346 A1BGP04217 495 aa16.71■□□□□ 0.27
PHC1-211ENST00000542346 RC3H1Q5TC82 1133 aaKnown RBP16.71■□□□□ 0.27
PHC1-211ENST00000542346 CCDC87Q9NVE4 849 aa16.71■□□□□ 0.27
PHC1-211ENST00000542346 QSER1Q2KHR3 1735 aa16.7■□□□□ 0.26
PHC1-211ENST00000542346 NBPF26B4DH59 902 aa16.7■□□□□ 0.26
PHC1-211ENST00000542346 PDIA6Q15084 440 aa16.7■□□□□ 0.26
PHC1-211ENST00000542346 NBPF14Q5TI25 921 aa16.7■□□□□ 0.26
PHC1-211ENST00000542346 NBPF10Q6P3W6 841 aaKnown RBP16.7■□□□□ 0.26
PHC1-211ENST00000542346 NBPF15Q8N660 670 aa16.7■□□□□ 0.26
PHC1-211ENST00000542346 CHPF2Q9P2E5 772 aa16.7■□□□□ 0.26
PHC1-211ENST00000542346 RARSP54136 660 aaKnown RBP16.69■□□□□ 0.26
PHC1-211ENST00000542346 ALDH1L2Q3SY69 923 aa16.69■□□□□ 0.26
PHC1-211ENST00000542346 DDX21Q9NR30 783 aaKnown RBP eCLIP16.69■□□□□ 0.26
PHC1-211ENST00000542346 DBF4Q9UBU7 674 aaPredicted RBP16.69■□□□□ 0.26
PHC1-211ENST00000542346 ZBTB1Q9Y2K1 713 aa16.69■□□□□ 0.26
PHC1-211ENST00000542346 C4AP0C0L4 1744 aa16.68■□□□□ 0.26
PHC1-211ENST00000542346 TCERG1O14776 1098 aaKnown RBP16.68■□□□□ 0.26
PHC1-211ENST00000542346 PIP4K2AP48426 406 aaPredicted RBP16.68■□□□□ 0.26
PHC1-211ENST00000542346 PROSER3Q2NL68 480 aa16.68■□□□□ 0.26
PHC1-211ENST00000542346 LRP10Q7Z4F1 713 aa16.68■□□□□ 0.26
PHC1-211ENST00000542346 SSH1Q8WYL5 1049 aa16.68■□□□□ 0.26
PHC1-211ENST00000542346 AKT1S1Q96B36 256 aa16.68■□□□□ 0.26
PHC1-211ENST00000542346 STK31Q9BXU1 1019 aa16.68■□□□□ 0.26
PHC1-211ENST00000542346 CANXP27824 592 aaKnown RBP16.67■□□□□ 0.26
PHC1-211ENST00000542346 AK7Q96M32 723 aa16.67■□□□□ 0.26
PHC1-211ENST00000542346 RPS6KA4O75676 772 aa16.66■□□□□ 0.26
PHC1-211ENST00000542346 ANXA1P04083 346 aa16.66■□□□□ 0.26
PHC1-211ENST00000542346 SLC4A2P04920 1241 aa16.66■□□□□ 0.26
PHC1-211ENST00000542346 MYL6BP14649 208 aa16.66■□□□□ 0.26
PHC1-211ENST00000542346 IL6STP40189 918 aaPredicted RBP16.66■□□□□ 0.26
PHC1-211ENST00000542346 ZNF827Q17R98 1081 aa16.66■□□□□ 0.26
PHC1-211ENST00000542346 MRPL50Q8N5N7 158 aaKnown RBP16.66■□□□□ 0.26
PHC1-211ENST00000542346 HYPKQ9NX55 129 aa16.66■□□□□ 0.26
PHC1-211ENST00000542346 RCAN3Q9UKA8 241 aa16.66■□□□□ 0.26
PHC1-211ENST00000542346 BCORQ6W2J9 1755 aa16.65■□□□□ 0.26
PHC1-211ENST00000542346 GNPATO15228 680 aa16.65■□□□□ 0.26
PHC1-211ENST00000542346 EIF5P55010 431 aaKnown RBP16.65■□□□□ 0.26
PHC1-211ENST00000542346 BRPF1P55201 1214 aaPredicted RBP16.65■□□□□ 0.26
PHC1-211ENST00000542346 BCL2L13Q9BXK5 485 aa16.65■□□□□ 0.26
PHC1-211ENST00000542346 ANO8Q9HCE9 1232 aaPredicted RBP16.65■□□□□ 0.26
PHC1-211ENST00000542346 SMC4Q9NTJ3 1288 aa16.65■□□□□ 0.26
PHC1-211ENST00000542346 PSDA5PKW4 1024 aaPredicted RBP16.64■□□□□ 0.25
PHC1-211ENST00000542346 AMIGO3Q86WK7 504 aa16.64■□□□□ 0.25
PHC1-211ENST00000542346 RTCBQ9Y3I0 505 aaKnown RBP16.64■□□□□ 0.25
PHC1-211ENST00000542346 ARFGEF2Q9Y6D5 1785 aa16.64■□□□□ 0.25
PHC1-211ENST00000542346 COL15A1P39059 1388 aa16.64■□□□□ 0.25
PHC1-211ENST00000542346 BCAR3O75815 825 aa16.63■□□□□ 0.25
PHC1-211ENST00000542346 G2E3Q7L622 706 aa16.63■□□□□ 0.25
PHC1-211ENST00000542346 PHAXQ9H814 394 aaKnown RBP16.63■□□□□ 0.25
PHC1-211ENST00000542346 SCN7AQ01118 1682 aa16.62■□□□□ 0.25
PHC1-211ENST00000542346 NUP98P52948 1817 aa16.62■□□□□ 0.25
PHC1-211ENST00000542346 SSFA2P28290 1259 aa16.62■□□□□ 0.25
PHC1-211ENST00000542346 SLC15A2Q16348 729 aa16.62■□□□□ 0.25
PHC1-211ENST00000542346 XAGE3Q8WTP9 111 aa16.62■□□□□ 0.25
PHC1-211ENST00000542346 STK32BQ9NY57 414 aa16.62■□□□□ 0.25
PHC1-211ENST00000542346 TFCP2L1Q9NZI6 479 aa16.62■□□□□ 0.25
PHC1-211ENST00000542346 ADRA2BP18089 450 aa16.61■□□□□ 0.25
PHC1-211ENST00000542346 FLIIQ13045 1269 aa16.61■□□□□ 0.25
PHC1-211ENST00000542346 SMIM5Q71RC9 77 aa16.61■□□□□ 0.25
PHC1-211ENST00000542346 COPS6Q7L5N1 327 aa16.61■□□□□ 0.25
PHC1-211ENST00000542346 ZNF330Q9Y3S2 320 aaPredicted RBP16.61■□□□□ 0.25
PHC1-211ENST00000542346 KIF16BQ96L93 1317 aa16.61■□□□□ 0.25
PHC1-211ENST00000542346 ANKRD36CQ5JPF3 1778 aa16.6■□□□□ 0.25
PHC1-211ENST00000542346 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.6■□□□□ 0.25
PHC1-211ENST00000542346 TTLL7Q6ZT98 887 aa16.6■□□□□ 0.25
PHC1-211ENST00000542346 PNPLA7Q6ZV29 1317 aa16.6■□□□□ 0.25
PHC1-211ENST00000542346 N4BP2Q86UW6 1770 aaPredicted RBP16.59■□□□□ 0.25
PHC1-211ENST00000542346 A0A087WZG4 1122 aa16.59■□□□□ 0.25
PHC1-211ENST00000542346 PHF14O94880 888 aa16.59■□□□□ 0.25
PHC1-211ENST00000542346 CENPBP07199 599 aaPredicted RBP16.59■□□□□ 0.25
PHC1-211ENST00000542346 AIMP1Q12904 312 aaKnown RBP16.59■□□□□ 0.25
PHC1-211ENST00000542346 TRAPPC3LQ5T215 181 aa16.59■□□□□ 0.25
PHC1-211ENST00000542346 NPM2Q86SE8 214 aaKnown RBP16.59■□□□□ 0.25
PHC1-211ENST00000542346 DZIP3Q86Y13 1208 aaKnown RBP16.59■□□□□ 0.25
PHC1-211ENST00000542346 ARHGEF1Q92888 912 aaKnown RBP16.59■□□□□ 0.25
PHC1-211ENST00000542346 PTPRCP08575 1304 aa16.59■□□□□ 0.25
PHC1-211ENST00000542346 FLAD1Q8NFF5 587 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms