RNA–Protein interactions for RNA: ENST00000541897.5

MSRB3-211, Transcript of methionine sulfoxide reductase B3, humanhuman

TSL 3

Gene MSRB3, Length 489 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-211ENST00000541897 CDCA7LQ96GN5 454 aa27.21■■□□□ 1.95
MSRB3-211ENST00000541897 GIGYF1O75420 1035 aaPredicted RBP27.2■■□□□ 1.94
MSRB3-211ENST00000541897 KCNQ4P56696 695 aa27.19■■□□□ 1.94
MSRB3-211ENST00000541897 SGIP1Q9BQI5 828 aa27.19■■□□□ 1.94
MSRB3-211ENST00000541897 TJP1Q07157 1748 aa27.19■■□□□ 1.94
MSRB3-211ENST00000541897 DUSP27Q5VZP5 1158 aa27.18■■□□□ 1.94
MSRB3-211ENST00000541897 FHDC1Q9C0D6 1143 aaPredicted RBP27.18■■□□□ 1.94
MSRB3-211ENST00000541897 ITPK1Q13572 414 aa27.17■■□□□ 1.94
MSRB3-211ENST00000541897 C5P01031 1676 aa27.17■■□□□ 1.94
MSRB3-211ENST00000541897 YTHDC1Q96MU7 727 aaKnown RBP27.16■■□□□ 1.94
MSRB3-211ENST00000541897 SYT17Q9BSW7 474 aa27.16■■□□□ 1.94
MSRB3-211ENST00000541897 CHMP4AQ9BY43 222 aa27.16■■□□□ 1.94
MSRB3-211ENST00000541897 TUBGCP6Q96RT7 1819 aa27.16■■□□□ 1.94
MSRB3-211ENST00000541897 AKT1S1Q96B36 256 aa27.15■■□□□ 1.94
MSRB3-211ENST00000541897 COL5A3P25940 1745 aaPredicted RBP27.14■■□□□ 1.94
MSRB3-211ENST00000541897 STARD3NLO95772 234 aa27.14■■□□□ 1.94
MSRB3-211ENST00000541897 DNAJC10Q8IXB1 793 aa27.14■■□□□ 1.94
MSRB3-211ENST00000541897 C8orf58Q8NAV2 365 aa27.14■■□□□ 1.94
MSRB3-211ENST00000541897 LAMB4A4D0S4 1761 aa27.14■■□□□ 1.93
MSRB3-211ENST00000541897 TAF1LQ8IZX4 1826 aa27.13■■□□□ 1.93
MSRB3-211ENST00000541897 QSER1Q2KHR3 1735 aa27.13■■□□□ 1.93
MSRB3-211ENST00000541897 EXOSC9Q06265 439 aaKnown RBP27.13■■□□□ 1.93
MSRB3-211ENST00000541897 KRT24Q2M2I5 525 aa27.13■■□□□ 1.93
MSRB3-211ENST00000541897 RC3H1Q5TC82 1133 aaKnown RBP27.13■■□□□ 1.93
MSRB3-211ENST00000541897 CNTNAP4Q9C0A0 1308 aa27.13■■□□□ 1.93
MSRB3-211ENST00000541897 CT47B1P0C2W7 299 aaPredicted RBP27.12■■□□□ 1.93
MSRB3-211ENST00000541897 CYP19A1P11511 503 aaPredicted RBP27.12■■□□□ 1.93
MSRB3-211ENST00000541897 LINC00116Q8NCU8 138 aa27.12■■□□□ 1.93
MSRB3-211ENST00000541897 USP16Q9Y5T5 823 aa27.12■■□□□ 1.93
MSRB3-211ENST00000541897 CHD4Q14839 1912 aa27.12■■□□□ 1.93
MSRB3-211ENST00000541897 TWISTNBQ3B726 338 aaPredicted RBP27.11■■□□□ 1.93
MSRB3-211ENST00000541897 ARXQ96QS3 562 aa27.11■■□□□ 1.93
MSRB3-211ENST00000541897 ERBB4Q15303 1308 aa27.11■■□□□ 1.93
MSRB3-211ENST00000541897 PRAMEF22A3QJZ6 481 aa27.1■■□□□ 1.93
MSRB3-211ENST00000541897 UTRNP46939 3433 aa27.09■■□□□ 1.93
MSRB3-211ENST00000541897 TSPYL6Q8N831 410 aa27.09■■□□□ 1.93
MSRB3-211ENST00000541897 ZNF428Q96B54 188 aa27.09■■□□□ 1.93
MSRB3-211ENST00000541897 C4BP0C0L5 1744 aa27.09■■□□□ 1.93
MSRB3-211ENST00000541897 PNPLA7Q6ZV29 1317 aa27.09■■□□□ 1.93
MSRB3-211ENST00000541897 VAMP4O75379 141 aa27.08■■□□□ 1.93
MSRB3-211ENST00000541897 TFCP2L1Q9NZI6 479 aa27.08■■□□□ 1.93
MSRB3-211ENST00000541897 CRKLP46109 303 aaKnown RBP27.07■■□□□ 1.92
MSRB3-211ENST00000541897 CCDC87Q9NVE4 849 aa27.07■■□□□ 1.92
MSRB3-211ENST00000541897 ELL2O00472 640 aaPredicted RBP27.06■■□□□ 1.92
MSRB3-211ENST00000541897 HDGFL1Q5TGJ6 251 aa27.06■■□□□ 1.92
MSRB3-211ENST00000541897 INTS5Q6P9B9 1019 aaKnown RBP27.06■■□□□ 1.92
MSRB3-211ENST00000541897 COL24A1Q17RW2 1714 aa27.04■■□□□ 1.92
MSRB3-211ENST00000541897 SLC16A10Q8TF71 515 aa27.04■■□□□ 1.92
MSRB3-211ENST00000541897 CCDC30Q5VVM6 783 aa27.03■■□□□ 1.92
MSRB3-211ENST00000541897 AK7Q96M32 723 aa27.03■■□□□ 1.92
MSRB3-211ENST00000541897 RPS6KA4O75676 772 aa27.02■■□□□ 1.92
MSRB3-211ENST00000541897 A1BGP04217 495 aa27.02■■□□□ 1.92
MSRB3-211ENST00000541897 EIF2S2P20042 333 aaKnown RBP27.02■■□□□ 1.92
MSRB3-211ENST00000541897 IL6STP40189 918 aaPredicted RBP27.01■■□□□ 1.91
MSRB3-211ENST00000541897 KLHL34Q8N239 644 aa27.01■■□□□ 1.91
MSRB3-211ENST00000541897 DDX21Q9NR30 783 aaKnown RBP eCLIP27.01■■□□□ 1.91
MSRB3-211ENST00000541897 DBF4Q9UBU7 674 aaPredicted RBP27.01■■□□□ 1.91
MSRB3-211ENST00000541897 ZBTB1Q9Y2K1 713 aa27.01■■□□□ 1.91
MSRB3-211ENST00000541897 PDIA6Q15084 440 aa27■■□□□ 1.91
MSRB3-211ENST00000541897 MYH14Q7Z406 1995 aaKnown RBP27■■□□□ 1.91
MSRB3-211ENST00000541897 POLD1P28340 1107 aa26.99■■□□□ 1.91
MSRB3-211ENST00000541897 RTCBQ9Y3I0 505 aaKnown RBP26.99■■□□□ 1.91
MSRB3-211ENST00000541897 NBPF26B4DH59 902 aa26.98■■□□□ 1.91
MSRB3-211ENST00000541897 GNPATO15228 680 aa26.98■■□□□ 1.91
MSRB3-211ENST00000541897 ADRA2BP18089 450 aa26.98■■□□□ 1.91
MSRB3-211ENST00000541897 SSFA2P28290 1259 aa26.98■■□□□ 1.91
MSRB3-211ENST00000541897 EIF5P55010 431 aaKnown RBP26.98■■□□□ 1.91
MSRB3-211ENST00000541897 NBPF10Q6P3W6 841 aaKnown RBP26.98■■□□□ 1.91
MSRB3-211ENST00000541897 NBPF15Q8N660 670 aa26.98■■□□□ 1.91
MSRB3-211ENST00000541897 FLAD1Q8NFF5 587 aa26.98■■□□□ 1.91
MSRB3-211ENST00000541897 ALDH1L2Q3SY69 923 aa26.97■■□□□ 1.91
MSRB3-211ENST00000541897 STK31Q9BXU1 1019 aa26.97■■□□□ 1.91
MSRB3-211ENST00000541897 UBR3Q6ZT12 1888 aa26.97■■□□□ 1.91
MSRB3-211ENST00000541897 MSH5O43196 834 aa26.96■■□□□ 1.91
MSRB3-211ENST00000541897 CANXP27824 592 aaKnown RBP26.96■■□□□ 1.91
MSRB3-211ENST00000541897 LRP10Q7Z4F1 713 aa26.96■■□□□ 1.91
MSRB3-211ENST00000541897 COL23A1Q86Y22 540 aaPredicted RBP26.96■■□□□ 1.91
MSRB3-211ENST00000541897 HYPKQ9NX55 129 aa26.96■■□□□ 1.91
MSRB3-211ENST00000541897 CHPF2Q9P2E5 772 aa26.96■■□□□ 1.91
MSRB3-211ENST00000541897 NECTIN2Q92692 538 aa26.95■■□□□ 1.9
MSRB3-211ENST00000541897 A0A087WZG4 1122 aa26.93■■□□□ 1.9
MSRB3-211ENST00000541897 COL15A1P39059 1388 aa26.93■■□□□ 1.9
MSRB3-211ENST00000541897 BRPF1P55201 1214 aaPredicted RBP26.92■■□□□ 1.9
MSRB3-211ENST00000541897 NPM2Q86SE8 214 aaKnown RBP26.92■■□□□ 1.9
MSRB3-211ENST00000541897 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP26.91■■□□□ 1.9
MSRB3-211ENST00000541897 MYL6BP14649 208 aa26.91■■□□□ 1.9
MSRB3-211ENST00000541897 RARSP54136 660 aaKnown RBP26.91■■□□□ 1.9
MSRB3-211ENST00000541897 GPR162Q16538 588 aa26.91■■□□□ 1.9
MSRB3-211ENST00000541897 PROSER3Q2NL68 480 aa26.91■■□□□ 1.9
MSRB3-211ENST00000541897 TRAPPC3LQ5T215 181 aa26.91■■□□□ 1.9
MSRB3-211ENST00000541897 CACNA1FO60840 1977 aa26.9■■□□□ 1.9
MSRB3-211ENST00000541897 SLC4A2P04920 1241 aa26.9■■□□□ 1.9
MSRB3-211ENST00000541897 PIP4K2AP48426 406 aaPredicted RBP26.9■■□□□ 1.9
MSRB3-211ENST00000541897 AMIGO3Q86WK7 504 aa26.9■■□□□ 1.9
MSRB3-211ENST00000541897 ZNF784Q8NCA9 323 aaPredicted RBP26.9■■□□□ 1.9
MSRB3-211ENST00000541897 RGL2O15211 777 aa26.89■■□□□ 1.9
MSRB3-211ENST00000541897 MSL1Q68DK7 614 aa26.89■■□□□ 1.9
MSRB3-211ENST00000541897 NLGN2Q8NFZ4 835 aa26.89■■□□□ 1.9
MSRB3-211ENST00000541897 SSH1Q8WYL5 1049 aa26.89■■□□□ 1.9
MSRB3-211ENST00000541897 GOLGB1Q14789 3259 aaKnown RBP26.89■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms