RNA–Protein interactions for RNA: ENST00000541363.5

HMGA2-210, Transcript of high mobility group AT-hook 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA2, Length 8,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-210ENST00000541363 EHBP1Q8NDI1 1231 aa17.7■□□□□ 0.42
HMGA2-210ENST00000541363 CCDC172P0C7W6 258 aa17.7■□□□□ 0.42
HMGA2-210ENST00000541363 POLR3DP05423 398 aaPredicted RBP17.69■□□□□ 0.42
HMGA2-210ENST00000541363 DZIP1Q86YF9 867 aaKnown RBP17.69■□□□□ 0.42
HMGA2-210ENST00000541363 MKNK2Q9HBH9 465 aa17.69■□□□□ 0.42
HMGA2-210ENST00000541363 ATP2C2O75185 946 aa17.69■□□□□ 0.42
HMGA2-210ENST00000541363 ABTB2Q8N961 1025 aa17.69■□□□□ 0.42
HMGA2-210ENST00000541363 IGHMBP2P38935 993 aaKnown RBP17.69■□□□□ 0.42
HMGA2-210ENST00000541363 BAZ1AQ9NRL2 1556 aaPredicted RBP17.69■□□□□ 0.42
HMGA2-210ENST00000541363 FEZ2Q9UHY8 353 aaPredicted RBP17.69■□□□□ 0.42
HMGA2-210ENST00000541363 MYCNP04198 464 aaPredicted RBP17.69■□□□□ 0.42
HMGA2-210ENST00000541363 PNISRQ8TF01 805 aaKnown RBP17.69■□□□□ 0.42
HMGA2-210ENST00000541363 HDGFL1Q5TGJ6 251 aa17.69■□□□□ 0.42
HMGA2-210ENST00000541363 SMC1BQ8NDV3 1235 aa17.69■□□□□ 0.42
HMGA2-210ENST00000541363 TBC1D5Q92609 795 aa17.69■□□□□ 0.42
HMGA2-210ENST00000541363 GMNNO75496 209 aa17.68■□□□□ 0.42
HMGA2-210ENST00000541363 CWC25Q9NXE8 425 aaPredicted RBP17.68■□□□□ 0.42
HMGA2-210ENST00000541363 ZBTB16Q05516 673 aa17.68■□□□□ 0.42
HMGA2-210ENST00000541363 TTC36A6NLP5 189 aa17.68■□□□□ 0.42
HMGA2-210ENST00000541363 NLRP6P59044 892 aa17.68■□□□□ 0.42
HMGA2-210ENST00000541363 SYCP3Q8IZU3 236 aa17.68■□□□□ 0.42
HMGA2-210ENST00000541363 CCDC63Q8NA47 563 aa17.68■□□□□ 0.42
HMGA2-210ENST00000541363 LIG1P18858 919 aa17.68■□□□□ 0.42
HMGA2-210ENST00000541363 PPP1R9BQ96SB3 815 aa17.68■□□□□ 0.42
HMGA2-210ENST00000541363 SYNCQ9H7C4 482 aa17.68■□□□□ 0.42
HMGA2-210ENST00000541363 ZFYP08048 801 aaPredicted RBP17.68■□□□□ 0.42
HMGA2-210ENST00000541363 MYL6BP14649 208 aa17.68■□□□□ 0.42
HMGA2-210ENST00000541363 SLC4A2P04920 1241 aa17.67■□□□□ 0.42
HMGA2-210ENST00000541363 CALML4Q96GE6 196 aa17.67■□□□□ 0.42
HMGA2-210ENST00000541363 HYPKQ9NX55 129 aa17.67■□□□□ 0.42
HMGA2-210ENST00000541363 CNNM3Q8NE01 707 aa17.67■□□□□ 0.42
HMGA2-210ENST00000541363 PPP4R3BQ5MIZ7 849 aa17.67■□□□□ 0.42
HMGA2-210ENST00000541363 SELENOOQ9BVL4 669 aa17.67■□□□□ 0.42
HMGA2-210ENST00000541363 TTC14Q96N46 770 aa17.67■□□□□ 0.42
HMGA2-210ENST00000541363 KIF5AQ12840 1032 aa17.66■□□□□ 0.42
HMGA2-210ENST00000541363 CEP120Q8N960 986 aa17.66■□□□□ 0.42
HMGA2-210ENST00000541363 TRMT1Q9NXH9 659 aaKnown RBP17.66■□□□□ 0.42
HMGA2-210ENST00000541363 MAP3K9P80192 1104 aa17.66■□□□□ 0.42
HMGA2-210ENST00000541363 CCDC40Q4G0X9 1142 aa17.66■□□□□ 0.42
HMGA2-210ENST00000541363 CEP126Q9P2H0 1117 aa17.66■□□□□ 0.42
HMGA2-210ENST00000541363 CPLX3Q8WVH0 158 aa17.66■□□□□ 0.42
HMGA2-210ENST00000541363 STRN4Q9NRL3 753 aa17.66■□□□□ 0.42
HMGA2-210ENST00000541363 SNX16P57768 344 aa17.66■□□□□ 0.42
HMGA2-210ENST00000541363 HMGB2P26583 209 aaKnown RBP17.66■□□□□ 0.42
HMGA2-210ENST00000541363 IDH1O75874 414 aaKnown RBP17.65■□□□□ 0.42
HMGA2-210ENST00000541363 SPTY2D1Q68D10 685 aaPredicted RBP17.65■□□□□ 0.42
HMGA2-210ENST00000541363 TCERG1LQ5VWI1 586 aa17.65■□□□□ 0.42
HMGA2-210ENST00000541363 CCDC144CPQ8IYA2 1237 aa17.65■□□□□ 0.42
HMGA2-210ENST00000541363 SPINK5Q9NQ38 1064 aaPredicted RBP17.65■□□□□ 0.42
HMGA2-210ENST00000541363 SATB1Q01826 763 aa17.65■□□□□ 0.42
HMGA2-210ENST00000541363 SNW1Q13573 536 aaKnown RBP17.65■□□□□ 0.42
HMGA2-210ENST00000541363 CHD1LQ86WJ1 897 aa17.65■□□□□ 0.42
HMGA2-210ENST00000541363 MIPOL1Q8TD10 442 aa17.65■□□□□ 0.42
HMGA2-210ENST00000541363 SCAND2PQ9GZW5 306 aaPredicted RBP17.65■□□□□ 0.42
HMGA2-210ENST00000541363 PYM1Q9BRP8 204 aaKnown RBP17.65■□□□□ 0.42
HMGA2-210ENST00000541363 SSRP1Q08945 709 aaKnown RBP17.65■□□□□ 0.42
HMGA2-210ENST00000541363 C8orf76Q96K31 380 aa17.65■□□□□ 0.42
HMGA2-210ENST00000541363 LRSAM1Q6UWE0 723 aa17.64■□□□□ 0.42
HMGA2-210ENST00000541363 C16orf45Q96MC5 204 aaPredicted RBP17.64■□□□□ 0.42
HMGA2-210ENST00000541363 PLEKHH1Q9ULM0 1364 aa17.64■□□□□ 0.42
HMGA2-210ENST00000541363 MCM4P33991 863 aa17.64■□□□□ 0.41
HMGA2-210ENST00000541363 ZFP91Q96JP5 570 aaPredicted RBP17.64■□□□□ 0.41
HMGA2-210ENST00000541363 CA8P35219 290 aa17.64■□□□□ 0.41
HMGA2-210ENST00000541363 CCDC77Q9BR77 488 aa17.64■□□□□ 0.41
HMGA2-210ENST00000541363 FAM184BQ9ULE4 1060 aa17.64■□□□□ 0.41
HMGA2-210ENST00000541363 PDE3AQ14432 1141 aa17.64■□□□□ 0.41
HMGA2-210ENST00000541363 CTCFLQ8NI51 663 aaPredicted RBP17.64■□□□□ 0.41
HMGA2-210ENST00000541363 GGNBP2Q9H3C7 697 aa17.64■□□□□ 0.41
HMGA2-210ENST00000541363 CCDC174Q6PII3 467 aa17.64■□□□□ 0.41
HMGA2-210ENST00000541363 CCDC110Q8TBZ0 833 aa17.64■□□□□ 0.41
HMGA2-210ENST00000541363 UTP14AQ9BVJ6 771 aaKnown RBP17.64■□□□□ 0.41
HMGA2-210ENST00000541363 SPG7Q9UQ90 795 aa17.63■□□□□ 0.41
HMGA2-210ENST00000541363 KIF5BP33176 963 aa17.63■□□□□ 0.41
HMGA2-210ENST00000541363 GOLIM4O00461 696 aa17.63■□□□□ 0.41
HMGA2-210ENST00000541363 TACC1O75410 805 aa17.63■□□□□ 0.41
HMGA2-210ENST00000541363 CCDC14Q49A88 953 aa17.63■□□□□ 0.41
HMGA2-210ENST00000541363 CPSF2Q9P2I0 782 aaKnown RBP17.63■□□□□ 0.41
HMGA2-210ENST00000541363 WDR78Q5VTH9 848 aa17.63■□□□□ 0.41
HMGA2-210ENST00000541363 MINDY4BA8MYZ0 360 aa17.62■□□□□ 0.41
HMGA2-210ENST00000541363 TMC6Q7Z403 805 aa17.62■□□□□ 0.41
HMGA2-210ENST00000541363 MPHOSPH6Q99547 160 aaKnown RBP17.62■□□□□ 0.41
HMGA2-210ENST00000541363 STIM2Q9P246 746 aa17.62■□□□□ 0.41
HMGA2-210ENST00000541363 PAXBP1Q9Y5B6 917 aa17.62■□□□□ 0.41
HMGA2-210ENST00000541363 CCDC7Q96M83 1385 aa17.62■□□□□ 0.41
HMGA2-210ENST00000541363 BRD4O60885 1362 aaPredicted RBP17.62■□□□□ 0.41
HMGA2-210ENST00000541363 ATP2A1O14983 1001 aa17.62■□□□□ 0.41
HMGA2-210ENST00000541363 SETSIPP0DME0 302 aa17.62■□□□□ 0.41
HMGA2-210ENST00000541363 CAVIN4Q5BKX8 364 aa17.62■□□□□ 0.41
HMGA2-210ENST00000541363 AKAP2Q9Y2D5 859 aa17.62■□□□□ 0.41
HMGA2-210ENST00000541363 STX1AQ16623 288 aa17.62■□□□□ 0.41
HMGA2-210ENST00000541363 ZNF444Q8N0Y2 327 aaPredicted RBP17.62■□□□□ 0.41
HMGA2-210ENST00000541363 OPA1O60313 960 aa17.62■□□□□ 0.41
HMGA2-210ENST00000541363 PRPHP41219 470 aa17.62■□□□□ 0.41
HMGA2-210ENST00000541363 CCDC121Q6ZUS5 278 aa17.62■□□□□ 0.41
HMGA2-210ENST00000541363 PRPF31Q8WWY3 499 aaKnown RBP17.62■□□□□ 0.41
HMGA2-210ENST00000541363 ABCF2Q9UG63 623 aa17.62■□□□□ 0.41
HMGA2-210ENST00000541363 KIAA1524Q8TCG1 905 aa17.62■□□□□ 0.41
HMGA2-210ENST00000541363 STX6O43752 255 aa17.61■□□□□ 0.41
HMGA2-210ENST00000541363 NLRP5P59047 1200 aa17.61■□□□□ 0.41
HMGA2-210ENST00000541363 BICD1Q96G01 975 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms