RNA–Protein interactions for RNA: ENST00000541280.1

SUDS3-202, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

TSL 5

Gene SUDS3, Length 659 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-202ENST00000541280 CRISPLD1Q9H336 500 aa9.77□□□□□ -0.85
SUDS3-202ENST00000541280 IQSEC3Q9UPP2 1182 aaPredicted RBP9.77□□□□□ -0.85
SUDS3-202ENST00000541280 GRIN2BQ13224 1484 aa9.77□□□□□ -0.85
SUDS3-202ENST00000541280 IGF1RP08069 1367 aa9.76□□□□□ -0.85
SUDS3-202ENST00000541280 WDR97A6NE52 1622 aa9.76□□□□□ -0.85
SUDS3-202ENST00000541280 TARBP1Q13395 1621 aaKnown RBP9.76□□□□□ -0.85
SUDS3-202ENST00000541280 CDK2AP1O14519 115 aa9.76□□□□□ -0.85
SUDS3-202ENST00000541280 LYPD4Q6UWN0 246 aa9.76□□□□□ -0.85
SUDS3-202ENST00000541280 C1orf216Q8TAB5 229 aa9.76□□□□□ -0.85
SUDS3-202ENST00000541280 GPAMQ9HCL2 828 aa9.76□□□□□ -0.85
SUDS3-202ENST00000541280 ABCA10Q8WWZ4 1543 aa9.76□□□□□ -0.85
SUDS3-202ENST00000541280 GSK3AP49840 483 aa9.75□□□□□ -0.85
SUDS3-202ENST00000541280 GTF2IP78347 998 aa9.75□□□□□ -0.85
SUDS3-202ENST00000541280 NIFKQ9BYG3 293 aaKnown RBP9.75□□□□□ -0.85
SUDS3-202ENST00000541280 GAPVD1Q14C86 1478 aa9.74□□□□□ -0.85
SUDS3-202ENST00000541280 MAGI1Q96QZ7 1491 aaPredicted RBP9.74□□□□□ -0.85
SUDS3-202ENST00000541280 A6NJY4 79 aa9.74□□□□□ -0.85
SUDS3-202ENST00000541280 CELA2BP08218 269 aaPredicted RBP9.74□□□□□ -0.85
SUDS3-202ENST00000541280 CSB-PGBD3P0DP91 1061 aa9.74□□□□□ -0.85
SUDS3-202ENST00000541280 HDGFL1Q5TGJ6 251 aa9.74□□□□□ -0.85
SUDS3-202ENST00000541280 PGBD3Q8N328 593 aa9.74□□□□□ -0.85
SUDS3-202ENST00000541280 LRRC4BQ9NT99 713 aa9.74□□□□□ -0.85
SUDS3-202ENST00000541280 BACH1O14867 736 aa9.73□□□□□ -0.85
SUDS3-202ENST00000541280 ATP4AP20648 1035 aa9.73□□□□□ -0.85
SUDS3-202ENST00000541280 PLA2G4AP47712 749 aa9.73□□□□□ -0.85
SUDS3-202ENST00000541280 TBC1D9Q6ZT07 1266 aa9.73□□□□□ -0.85
SUDS3-202ENST00000541280 PROSER2Q86WR7 435 aaPredicted RBP9.73□□□□□ -0.85
SUDS3-202ENST00000541280 NDFIP2Q9NV92 336 aa9.73□□□□□ -0.85
SUDS3-202ENST00000541280 RNF225M0QZC1 329 aaPredicted RBP9.72□□□□□ -0.85
SUDS3-202ENST00000541280 ATP9BO43861 1147 aa9.72□□□□□ -0.85
SUDS3-202ENST00000541280 MX2P20592 715 aa9.72□□□□□ -0.85
SUDS3-202ENST00000541280 EFHC2Q5JST6 749 aa9.72□□□□□ -0.85
SUDS3-202ENST00000541280 TRIM50Q86XT4 487 aa9.72□□□□□ -0.85
SUDS3-202ENST00000541280 CLUAP1Q96AJ1 413 aa9.72□□□□□ -0.85
SUDS3-202ENST00000541280 RUBCNLQ9H714 662 aa9.72□□□□□ -0.85
SUDS3-202ENST00000541280 SERTAD1Q9UHV2 236 aa9.72□□□□□ -0.85
SUDS3-202ENST00000541280 NSFL1CQ9UNZ2 370 aaKnown RBP9.72□□□□□ -0.85
SUDS3-202ENST00000541280 PHF24Q9UPV7 400 aa9.72□□□□□ -0.85
SUDS3-202ENST00000541280 EIF4G3O43432 1585 aaKnown RBP9.71□□□□□ -0.85
SUDS3-202ENST00000541280 USP17L3A6NCW0 530 aa9.71□□□□□ -0.86
SUDS3-202ENST00000541280 USP17L4A6NCW7 530 aa9.71□□□□□ -0.86
SUDS3-202ENST00000541280 A6NJR5 290 aa9.71□□□□□ -0.86
SUDS3-202ENST00000541280 MAP2K3P46734 347 aa9.71□□□□□ -0.86
SUDS3-202ENST00000541280 EPHA4P54764 986 aa9.71□□□□□ -0.86
SUDS3-202ENST00000541280 MAP3K10Q02779 954 aa9.71□□□□□ -0.86
SUDS3-202ENST00000541280 USP17L2Q6R6M4 530 aa9.71□□□□□ -0.86
SUDS3-202ENST00000541280 USP17L1Q7RTZ2 530 aa9.71□□□□□ -0.86
SUDS3-202ENST00000541280 ZNF358Q9NW07 568 aa9.71□□□□□ -0.86
SUDS3-202ENST00000541280 ZDHHC3Q9NYG2 299 aa9.71□□□□□ -0.86
SUDS3-202ENST00000541280 USP3Q9Y6I4 520 aa9.71□□□□□ -0.86
SUDS3-202ENST00000541280 SYNJ2O15056 1496 aa9.71□□□□□ -0.86
SUDS3-202ENST00000541280 FOXK2Q01167 660 aa9.7□□□□□ -0.86
SUDS3-202ENST00000541280 DEPDC4Q8N2C3 294 aa9.7□□□□□ -0.86
SUDS3-202ENST00000541280 ACDQ96AP0 544 aa9.7□□□□□ -0.86
SUDS3-202ENST00000541280 DNAAF2Q9NVR5 837 aaKnown RBP9.7□□□□□ -0.86
SUDS3-202ENST00000541280 SCHIP1Q9P0W5 487 aaPredicted RBP9.7□□□□□ -0.86
SUDS3-202ENST00000541280 ATXN7L1Q9ULK2 861 aaPredicted RBP9.7□□□□□ -0.86
SUDS3-202ENST00000541280 SNAPC4Q5SXM2 1469 aa9.7□□□□□ -0.86
SUDS3-202ENST00000541280 ZBTB7BO15156 539 aaPredicted RBP9.69□□□□□ -0.86
SUDS3-202ENST00000541280 BCRP11274 1271 aa9.69□□□□□ -0.86
SUDS3-202ENST00000541280 ATP1A2P50993 1020 aa9.69□□□□□ -0.86
SUDS3-202ENST00000541280 NLRP8Q86W28 1048 aa9.69□□□□□ -0.86
SUDS3-202ENST00000541280 ENAMQ9NRM1 1142 aa9.69□□□□□ -0.86
SUDS3-202ENST00000541280 TOP2BQ02880 1626 aa9.68□□□□□ -0.86
SUDS3-202ENST00000541280 CYB5RLQ6IPT4 315 aa9.68□□□□□ -0.86
SUDS3-202ENST00000541280 FIGNL1Q6PIW4 674 aa9.68□□□□□ -0.86
SUDS3-202ENST00000541280 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.68□□□□□ -0.86
SUDS3-202ENST00000541280 CLDN10P78369 228 aa9.67□□□□□ -0.86
SUDS3-202ENST00000541280 PSME1Q06323 249 aa9.67□□□□□ -0.86
SUDS3-202ENST00000541280 NBPF1Q3BBV0 1214 aa9.67□□□□□ -0.86
SUDS3-202ENST00000541280 GLMNQ92990 594 aa9.67□□□□□ -0.86
SUDS3-202ENST00000541280 KIAA1024Q9UPX6 916 aa9.67□□□□□ -0.86
SUDS3-202ENST00000541280 FHAD1B1AJZ9 1412 aa9.66□□□□□ -0.86
SUDS3-202ENST00000541280 M0R2N6 131 aa9.66□□□□□ -0.86
SUDS3-202ENST00000541280 BNIP3LO60238 219 aa9.66□□□□□ -0.86
SUDS3-202ENST00000541280 TEAD4Q15561 434 aa9.66□□□□□ -0.86
SUDS3-202ENST00000541280 LARGE2Q8N3Y3 721 aa9.66□□□□□ -0.86
SUDS3-202ENST00000541280 SIX5Q8N196 739 aa9.65□□□□□ -0.86
SUDS3-202ENST00000541280 ZDHHC1Q8WTX9 485 aa9.65□□□□□ -0.86
SUDS3-202ENST00000541280 SCARF2Q96GP6 870 aaPredicted RBP9.65□□□□□ -0.86
SUDS3-202ENST00000541280 OXCT2Q9BYC2 517 aaPredicted RBP9.65□□□□□ -0.86
SUDS3-202ENST00000541280 CABP1Q9NZU7 370 aa9.65□□□□□ -0.86
SUDS3-202ENST00000541280 PCDHGC4Q9Y5F7 938 aa9.65□□□□□ -0.86
SUDS3-202ENST00000541280 OIP5O43482 229 aa9.64□□□□□ -0.87
SUDS3-202ENST00000541280 DKK1O94907 266 aa9.64□□□□□ -0.87
SUDS3-202ENST00000541280 TATP17735 454 aaPredicted RBP9.64□□□□□ -0.87
SUDS3-202ENST00000541280 FGFR3P22607 806 aa9.64□□□□□ -0.87
SUDS3-202ENST00000541280 MARSP56192 900 aaKnown RBP9.64□□□□□ -0.87
SUDS3-202ENST00000541280 RASSF7Q02833 373 aa9.64□□□□□ -0.87
SUDS3-202ENST00000541280 CCDC102BQ68D86 513 aa9.64□□□□□ -0.87
SUDS3-202ENST00000541280 POTEAQ6S8J7 498 aa9.64□□□□□ -0.87
SUDS3-202ENST00000541280 TPCN2Q8NHX9 752 aa9.64□□□□□ -0.87
SUDS3-202ENST00000541280 AIDAQ96BJ3 306 aa9.64□□□□□ -0.87
SUDS3-202ENST00000541280 KLRG1Q96E93 195 aa9.64□□□□□ -0.87
SUDS3-202ENST00000541280 ABHD17AQ96GS6 310 aa9.64□□□□□ -0.87
SUDS3-202ENST00000541280 ZCCHC2Q9C0B9 1178 aaKnown RBP9.64□□□□□ -0.87
SUDS3-202ENST00000541280 MKRN1Q9UHC7 482 aaKnown RBP9.64□□□□□ -0.87
SUDS3-202ENST00000541280 KIF27Q86VH2 1401 aa9.64□□□□□ -0.87
SUDS3-202ENST00000541280 A0A1W2PNR3 127 aa9.63□□□□□ -0.87
SUDS3-202ENST00000541280 PALM3A6NDB9 673 aaPredicted RBP9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms