RNA–Protein interactions for RNA: ENST00000541168.1

SMCO2-205, Transcript of single-pass membrane protein with coiled-coil domains 2, humanhuman

TSL 3

Gene SMCO2, Length 922 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO2-205ENST00000541168 NIFKQ9BYG3 293 aaKnown RBP11.9□□□□□ -0.5
SMCO2-205ENST00000541168 ATXN7O15265 892 aaPredicted RBP11.88□□□□□ -0.51
SMCO2-205ENST00000541168 DGKGP49619 791 aa11.88□□□□□ -0.51
SMCO2-205ENST00000541168 AIDAQ96BJ3 306 aa11.88□□□□□ -0.51
SMCO2-205ENST00000541168 CCDC180Q9P1Z9 1646 aa11.88□□□□□ -0.51
SMCO2-205ENST00000541168 FURINP09958 794 aa11.87□□□□□ -0.51
SMCO2-205ENST00000541168 SMTNP53814 917 aa11.87□□□□□ -0.51
SMCO2-205ENST00000541168 DCDC2BA2VCK2 349 aa11.86□□□□□ -0.51
SMCO2-205ENST00000541168 MAP7D1Q3KQU3 841 aa11.86□□□□□ -0.51
SMCO2-205ENST00000541168 PLPP7Q8NBV4 271 aa11.86□□□□□ -0.51
SMCO2-205ENST00000541168 NOP53Q9NZM5 478 aaKnown RBP11.86□□□□□ -0.51
SMCO2-205ENST00000541168 NBPF1Q3BBV0 1214 aa11.85□□□□□ -0.51
SMCO2-205ENST00000541168 A0A1W2PNR3 127 aa11.84□□□□□ -0.51
SMCO2-205ENST00000541168 MAPTP10636 758 aaKnown RBP11.84□□□□□ -0.51
SMCO2-205ENST00000541168 CD33P20138 364 aa11.84□□□□□ -0.51
SMCO2-205ENST00000541168 ADH6P28332 368 aa11.84□□□□□ -0.51
SMCO2-205ENST00000541168 ARSJQ5FYB0 599 aaPredicted RBP11.84□□□□□ -0.51
SMCO2-205ENST00000541168 SERTAD1Q9UHV2 236 aa11.84□□□□□ -0.51
SMCO2-205ENST00000541168 C1QTNF9BB2RNN3 333 aa11.83□□□□□ -0.52
SMCO2-205ENST00000541168 TNP2Q05952 138 aa11.83□□□□□ -0.52
SMCO2-205ENST00000541168 FAM182BQ5T319 152 aa11.83□□□□□ -0.52
SMCO2-205ENST00000541168 CHSY3Q70JA7 882 aa11.83□□□□□ -0.52
SMCO2-205ENST00000541168 ZNF295-AS1Q8N0V1 137 aa11.83□□□□□ -0.52
SMCO2-205ENST00000541168 GDPD2Q9HCC8 539 aa11.83□□□□□ -0.52
SMCO2-205ENST00000541168 HCN2Q9UL51 889 aa11.83□□□□□ -0.52
SMCO2-205ENST00000541168 KHNYNO15037 678 aaKnown RBP11.82□□□□□ -0.52
SMCO2-205ENST00000541168 TATP17735 454 aaPredicted RBP11.82□□□□□ -0.52
SMCO2-205ENST00000541168 ABL2P42684 1182 aa11.82□□□□□ -0.52
SMCO2-205ENST00000541168 CD163Q86VB7 1156 aa11.82□□□□□ -0.52
SMCO2-205ENST00000541168 AVENQ9NQS1 362 aaPredicted RBP11.82□□□□□ -0.52
SMCO2-205ENST00000541168 TMEM229AB2RXF0 380 aa11.81□□□□□ -0.52
SMCO2-205ENST00000541168 FCHSD1Q86WN1 690 aa11.81□□□□□ -0.52
SMCO2-205ENST00000541168 ZDHHC3Q9NYG2 299 aa11.81□□□□□ -0.52
SMCO2-205ENST00000541168 KLF15Q9UIH9 416 aa11.81□□□□□ -0.52
SMCO2-205ENST00000541168 IQSEC3Q9UPP2 1182 aaPredicted RBP11.81□□□□□ -0.52
SMCO2-205ENST00000541168 ABCC9O60706 1549 aa11.81□□□□□ -0.52
SMCO2-205ENST00000541168 A6NJY4 79 aa11.8□□□□□ -0.52
SMCO2-205ENST00000541168 CHRNA4P43681 627 aa11.8□□□□□ -0.52
SMCO2-205ENST00000541168 MTFR1Q15390 333 aa11.8□□□□□ -0.52
SMCO2-205ENST00000541168 WASHC4Q2M389 1173 aa11.8□□□□□ -0.52
SMCO2-205ENST00000541168 SLC4A9Q96Q91 983 aa11.8□□□□□ -0.52
SMCO2-205ENST00000541168 USP3Q9Y6I4 520 aa11.8□□□□□ -0.52
SMCO2-205ENST00000541168 CDK2AP1O14519 115 aa11.79□□□□□ -0.52
SMCO2-205ENST00000541168 FAM157BP0CG42 384 aa11.79□□□□□ -0.52
SMCO2-205ENST00000541168 SEMA3FQ13275 785 aa11.79□□□□□ -0.52
SMCO2-205ENST00000541168 GJA3Q9Y6H8 435 aa11.79□□□□□ -0.52
SMCO2-205ENST00000541168 ZIC5Q96T25 663 aa11.78□□□□□ -0.52
SMCO2-205ENST00000541168 CABP1Q9NZU7 370 aa11.78□□□□□ -0.52
SMCO2-205ENST00000541168 SLC24A1O60721 1099 aa11.77□□□□□ -0.53
SMCO2-205ENST00000541168 SOX11P35716 441 aa11.77□□□□□ -0.53
SMCO2-205ENST00000541168 ZNF468Q5VIY5 522 aaPredicted RBP11.77□□□□□ -0.53
SMCO2-205ENST00000541168 Q8N3U1 123 aa11.77□□□□□ -0.53
SMCO2-205ENST00000541168 PCBP4P57723 403 aaKnown RBP11.76□□□□□ -0.53
SMCO2-205ENST00000541168 SAMD5Q5TGI4 173 aa11.75□□□□□ -0.53
SMCO2-205ENST00000541168 PRR12Q9ULL5 1215 aa11.75□□□□□ -0.53
SMCO2-205ENST00000541168 BICDL1Q6ZP65 573 aa11.74□□□□□ -0.53
SMCO2-205ENST00000541168 PCDHGA11Q9Y5H2 935 aa11.74□□□□□ -0.53
SMCO2-205ENST00000541168 PIK3CDO00329 1044 aa11.73□□□□□ -0.53
SMCO2-205ENST00000541168 TRIM11Q96F44 468 aa11.73□□□□□ -0.53
SMCO2-205ENST00000541168 MARK1Q9P0L2 795 aa11.73□□□□□ -0.53
SMCO2-205ENST00000541168 PARP3Q9Y6F1 533 aa11.73□□□□□ -0.53
SMCO2-205ENST00000541168 EFSO43281 561 aa11.72□□□□□ -0.53
SMCO2-205ENST00000541168 LAMC2Q13753 1193 aa11.72□□□□□ -0.53
SMCO2-205ENST00000541168 STRN4Q9NRL3 753 aa11.72□□□□□ -0.53
SMCO2-205ENST00000541168 BACH1O14867 736 aa11.71□□□□□ -0.53
SMCO2-205ENST00000541168 EML3Q32P44 896 aa11.71□□□□□ -0.53
SMCO2-205ENST00000541168 TXLNAP40222 546 aa11.7□□□□□ -0.54
SMCO2-205ENST00000541168 PLVAPQ9BX97 442 aa11.7□□□□□ -0.54
SMCO2-205ENST00000541168 SPATA31C1P0DKV0 1188 aa11.69□□□□□ -0.54
SMCO2-205ENST00000541168 MCM6Q14566 821 aa11.69□□□□□ -0.54
SMCO2-205ENST00000541168 ZDHHC1Q8WTX9 485 aa11.69□□□□□ -0.54
SMCO2-205ENST00000541168 SCHIP1Q9P0W5 487 aaPredicted RBP11.69□□□□□ -0.54
SMCO2-205ENST00000541168 NOD1Q9Y239 953 aa11.69□□□□□ -0.54
SMCO2-205ENST00000541168 ELOA3CA0A087WX78 387 aaPredicted RBP11.68□□□□□ -0.54
SMCO2-205ENST00000541168 ELOA3DA6NLF2 546 aaPredicted RBP11.68□□□□□ -0.54
SMCO2-205ENST00000541168 GTF2IP78347 998 aa11.68□□□□□ -0.54
SMCO2-205ENST00000541168 PSME1Q06323 249 aa11.68□□□□□ -0.54
SMCO2-205ENST00000541168 DOC2BQ14184 412 aa11.68□□□□□ -0.54
SMCO2-205ENST00000541168 ELOA3BQ3SY89 546 aa11.68□□□□□ -0.54
SMCO2-205ENST00000541168 ELOA3Q8NG57 546 aa11.68□□□□□ -0.54
SMCO2-205ENST00000541168 SKIP12755 728 aa11.67□□□□□ -0.54
SMCO2-205ENST00000541168 ZNF358Q9NW07 568 aa11.67□□□□□ -0.54
SMCO2-205ENST00000541168 ITGB7P26010 798 aa11.66□□□□□ -0.54
SMCO2-205ENST00000541168 GATA4P43694 442 aa11.66□□□□□ -0.54
SMCO2-205ENST00000541168 SYT9Q86SS6 491 aa11.66□□□□□ -0.54
SMCO2-205ENST00000541168 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.66□□□□□ -0.54
SMCO2-205ENST00000541168 L3MBTL2Q969R5 705 aa11.66□□□□□ -0.54
SMCO2-205ENST00000541168 SEMA6BQ9H3T3 888 aa11.66□□□□□ -0.54
SMCO2-205ENST00000541168 LRRC69Q6ZNQ3 347 aa11.65□□□□□ -0.54
SMCO2-205ENST00000541168 MDFIQ99750 246 aa11.65□□□□□ -0.54
SMCO2-205ENST00000541168 LZTS3O60299 673 aaPredicted RBP11.64□□□□□ -0.55
SMCO2-205ENST00000541168 ALAS2P22557 587 aa11.64□□□□□ -0.55
SMCO2-205ENST00000541168 NCOA4Q13772 614 aa11.64□□□□□ -0.55
SMCO2-205ENST00000541168 TEAD4Q15561 434 aa11.64□□□□□ -0.55
SMCO2-205ENST00000541168 SPDYE3A6NKU9 549 aa11.63□□□□□ -0.55
SMCO2-205ENST00000541168 EML1O00423 815 aa11.63□□□□□ -0.55
SMCO2-205ENST00000541168 NOS2P35228 1153 aa11.63□□□□□ -0.55
SMCO2-205ENST00000541168 EPHA4P54764 986 aa11.63□□□□□ -0.55
SMCO2-205ENST00000541168 TPRNQ4KMQ1 711 aa11.63□□□□□ -0.55
SMCO2-205ENST00000541168 SLC9A9Q8IVB4 645 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms