RNA–Protein interactions for RNA: ENST00000540999.5

TCF4-207, Transcript of transcription factor 4, humanhuman

TSL 2 BASIC

Gene TCF4, Length 2,572 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-207ENST00000540999 ATF3P18847 181 aa10.81□□□□□ -0.68
TCF4-207ENST00000540999 CALRP27797 417 aaKnown RBP10.81□□□□□ -0.68
TCF4-207ENST00000540999 MYCBPQ99417 103 aaPredicted RBP10.81□□□□□ -0.68
TCF4-207ENST00000540999 XIRP1Q702N8 1843 aaKnown RBP10.81□□□□□ -0.68
TCF4-207ENST00000540999 MPHOSPH10O00566 681 aaKnown RBP10.8□□□□□ -0.68
TCF4-207ENST00000540999 AMPHP49418 695 aa10.8□□□□□ -0.68
TCF4-207ENST00000540999 SULT6B1Q6IMI4 303 aa10.8□□□□□ -0.68
TCF4-207ENST00000540999 B4GALNT3Q6L9W6 998 aa10.8□□□□□ -0.68
TCF4-207ENST00000540999 THUMPD2Q9BTF0 503 aaKnown RBP10.8□□□□□ -0.68
TCF4-207ENST00000540999 EPB41L2O43491 1005 aaKnown RBP10.8□□□□□ -0.68
TCF4-207ENST00000540999 CSPP1Q1MSJ5 1256 aa10.8□□□□□ -0.68
TCF4-207ENST00000540999 C20orf194Q5TEA3 1177 aa10.8□□□□□ -0.68
TCF4-207ENST00000540999 ANKRD13AQ8IZ07 590 aa10.8□□□□□ -0.68
TCF4-207ENST00000540999 TSR2Q969E8 191 aaKnown RBP10.8□□□□□ -0.68
TCF4-207ENST00000540999 FEZ2Q9UHY8 353 aaPredicted RBP10.8□□□□□ -0.68
TCF4-207ENST00000540999 RIOK3O14730 519 aaKnown RBP10.79□□□□□ -0.68
TCF4-207ENST00000540999 ERCC3P19447 782 aa10.79□□□□□ -0.68
TCF4-207ENST00000540999 LTV1Q96GA3 475 aaPredicted RBP10.79□□□□□ -0.68
TCF4-207ENST00000540999 MST1RQ04912 1400 aa10.79□□□□□ -0.68
TCF4-207ENST00000540999 BCAR3O75815 825 aa10.79□□□□□ -0.68
TCF4-207ENST00000540999 ZRSR2Q15696 482 aaKnown RBP10.79□□□□□ -0.68
TCF4-207ENST00000540999 KRT28Q7Z3Y7 464 aa10.79□□□□□ -0.68
TCF4-207ENST00000540999 CCDC82Q8N4S0 544 aa10.79□□□□□ -0.68
TCF4-207ENST00000540999 CXorf38Q8TB03 319 aa10.78□□□□□ -0.68
TCF4-207ENST00000540999 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.78□□□□□ -0.68
TCF4-207ENST00000540999 PEX14O75381 377 aa10.78□□□□□ -0.68
TCF4-207ENST00000540999 EXOC6Q8TAG9 804 aa10.78□□□□□ -0.68
TCF4-207ENST00000540999 EFCC1Q9HA90 598 aa10.78□□□□□ -0.68
TCF4-207ENST00000540999 FAM83GA6ND36 823 aa10.77□□□□□ -0.68
TCF4-207ENST00000540999 PPFIA4O75335 1185 aa10.77□□□□□ -0.68
TCF4-207ENST00000540999 CAPN2P17655 700 aa10.77□□□□□ -0.68
TCF4-207ENST00000540999 HOXC9P31274 260 aa10.77□□□□□ -0.68
TCF4-207ENST00000540999 ZKSCAN2Q63HK3 967 aa10.77□□□□□ -0.68
TCF4-207ENST00000540999 WDR63Q8IWG1 891 aa10.77□□□□□ -0.68
TCF4-207ENST00000540999 SBNO1A3KN83 1393 aa10.77□□□□□ -0.69
TCF4-207ENST00000540999 FLT4P35916 1363 aa10.77□□□□□ -0.69
TCF4-207ENST00000540999 DLG5Q8TDM6 1919 aa10.77□□□□□ -0.69
TCF4-207ENST00000540999 KIF4AO95239 1232 aa10.77□□□□□ -0.69
TCF4-207ENST00000540999 DCTN1Q14203 1278 aa10.77□□□□□ -0.69
TCF4-207ENST00000540999 ZC3H12AQ5D1E8 599 aaKnown RBP10.77□□□□□ -0.69
TCF4-207ENST00000540999 PAIP2Q9BPZ3 127 aaKnown RBP10.77□□□□□ -0.69
TCF4-207ENST00000540999 LTN1O94822 1766 aa10.77□□□□□ -0.69
TCF4-207ENST00000540999 C1QTNF12Q5T7M4 302 aa10.76□□□□□ -0.69
TCF4-207ENST00000540999 EYA1Q99502 592 aa10.76□□□□□ -0.69
TCF4-207ENST00000540999 PPP4R2Q9NY27 417 aa10.76□□□□□ -0.69
TCF4-207ENST00000540999 PNMA2Q9UL42 364 aa10.76□□□□□ -0.69
TCF4-207ENST00000540999 TRIM6-TRIM34B2RNG4 842 aa10.76□□□□□ -0.69
TCF4-207ENST00000540999 NFE2L2Q16236 605 aa10.76□□□□□ -0.69
TCF4-207ENST00000540999 BCL2L13Q9BXK5 485 aa10.76□□□□□ -0.69
TCF4-207ENST00000540999 TRIM34Q9BYJ4 488 aa10.76□□□□□ -0.69
TCF4-207ENST00000540999 KDM4CQ9H3R0 1056 aa10.76□□□□□ -0.69
TCF4-207ENST00000540999 MSH6P52701 1360 aa10.76□□□□□ -0.69
TCF4-207ENST00000540999 KCNJ4P48050 445 aa10.75□□□□□ -0.69
TCF4-207ENST00000540999 LONRF3Q496Y0 759 aa10.75□□□□□ -0.69
TCF4-207ENST00000540999 CADPS2Q86UW7 1296 aa10.75□□□□□ -0.69
TCF4-207ENST00000540999 USHBP1Q8N6Y0 703 aa10.75□□□□□ -0.69
TCF4-207ENST00000540999 RGPD1P0DJD0 1748 aa10.75□□□□□ -0.69
TCF4-207ENST00000540999 TRPM3Q9HCF6 1732 aaPredicted RBP10.75□□□□□ -0.69
TCF4-207ENST00000540999 CABLES1Q8TDN4 633 aa10.75□□□□□ -0.69
TCF4-207ENST00000540999 SMC4Q9NTJ3 1288 aa10.75□□□□□ -0.69
TCF4-207ENST00000540999 SMC3Q9UQE7 1217 aa10.75□□□□□ -0.69
TCF4-207ENST00000540999 FRMD4BQ9Y2L6 1034 aa10.75□□□□□ -0.69
TCF4-207ENST00000540999 USP54Q70EL1 1684 aa10.75□□□□□ -0.69
TCF4-207ENST00000540999 NFAT5O94916 1531 aa10.75□□□□□ -0.69
TCF4-207ENST00000540999 GCP02774 474 aa10.74□□□□□ -0.69
TCF4-207ENST00000540999 KCNV2Q8TDN2 545 aa10.74□□□□□ -0.69
TCF4-207ENST00000540999 TSPYL1Q9H0U9 437 aa10.74□□□□□ -0.69
TCF4-207ENST00000540999 ESPNB1AK53 854 aa10.74□□□□□ -0.69
TCF4-207ENST00000540999 ZNF853P0CG23 659 aa10.74□□□□□ -0.69
TCF4-207ENST00000540999 CCT2P78371 535 aaKnown RBP10.74□□□□□ -0.69
TCF4-207ENST00000540999 UVSSAQ2YD98 709 aa10.74□□□□□ -0.69
TCF4-207ENST00000540999 FAM210AQ96ND0 272 aa10.74□□□□□ -0.69
TCF4-207ENST00000540999 CRBNQ96SW2 442 aa10.74□□□□□ -0.69
TCF4-207ENST00000540999 NCAPGQ9BPX3 1015 aa10.74□□□□□ -0.69
TCF4-207ENST00000540999 EXOSC9Q06265 439 aaKnown RBP10.73□□□□□ -0.69
TCF4-207ENST00000540999 FAM13BQ9NYF5 915 aa10.73□□□□□ -0.69
TCF4-207ENST00000540999 TDO2P48775 406 aa10.73□□□□□ -0.69
TCF4-207ENST00000540999 ZC3H6P61129 1189 aaKnown RBP10.73□□□□□ -0.69
TCF4-207ENST00000540999 ZCRB1Q8TBF4 217 aaKnown RBP10.73□□□□□ -0.69
TCF4-207ENST00000540999 SPATA32Q96LK8 384 aa10.73□□□□□ -0.69
TCF4-207ENST00000540999 TRAIPQ9BWF2 469 aa10.73□□□□□ -0.69
TCF4-207ENST00000540999 KIF1AQ12756 1690 aa10.73□□□□□ -0.69
TCF4-207ENST00000540999 DCCP43146 1447 aa10.73□□□□□ -0.69
TCF4-207ENST00000540999 KIF16BQ96L93 1317 aa10.73□□□□□ -0.69
TCF4-207ENST00000540999 COQ9O75208 318 aa10.72□□□□□ -0.69
TCF4-207ENST00000540999 BRINP3Q76B58 766 aa10.72□□□□□ -0.69
TCF4-207ENST00000540999 NCOA3Q9Y6Q9 1424 aa10.72□□□□□ -0.69
TCF4-207ENST00000540999 IGSF1Q8N6C5 1336 aa10.72□□□□□ -0.69
TCF4-207ENST00000540999 TERF1P54274 439 aa10.72□□□□□ -0.69
TCF4-207ENST00000540999 MCM10Q7L590 875 aa10.72□□□□□ -0.69
TCF4-207ENST00000540999 LRRC59Q96AG4 307 aaKnown RBP10.72□□□□□ -0.69
TCF4-207ENST00000540999 NBPF3Q9H094 633 aa10.72□□□□□ -0.69
TCF4-207ENST00000540999 TNNQ9UQP3 1299 aa10.72□□□□□ -0.69
TCF4-207ENST00000540999 AXIN2Q9Y2T1 843 aa10.72□□□□□ -0.69
TCF4-207ENST00000540999 RGPD2P0DJD1 1756 aa10.72□□□□□ -0.69
TCF4-207ENST00000540999 RARSP54136 660 aaKnown RBP10.72□□□□□ -0.69
TCF4-207ENST00000540999 MTHFSDQ2M296 383 aaKnown RBP10.72□□□□□ -0.69
TCF4-207ENST00000540999 MICAL1Q8TDZ2 1067 aa10.72□□□□□ -0.69
TCF4-207ENST00000540999 IP6K1Q92551 441 aa10.72□□□□□ -0.69
TCF4-207ENST00000540999 SLAIN2Q9P270 581 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms