RNA–Protein interactions for RNA: ENST00000540251.5

NEK2-205, Transcript of NIMA related kinase 2, humanhuman

TSL 1 (best) BASIC

Gene NEK2, Length 1,318 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK2-205ENST00000540251 CNTNAP4Q9C0A0 1308 aa23.83■■□□□ 1.41
NEK2-205ENST00000540251 UBR3Q6ZT12 1888 aa23.82■■□□□ 1.4
NEK2-205ENST00000540251 STARD3NLO95772 234 aa23.82■■□□□ 1.4
NEK2-205ENST00000540251 CT47B1P0C2W7 299 aaPredicted RBP23.82■■□□□ 1.4
NEK2-205ENST00000540251 KRT24Q2M2I5 525 aa23.82■■□□□ 1.4
NEK2-205ENST00000540251 LINC00116Q8NCU8 138 aa23.82■■□□□ 1.4
NEK2-205ENST00000540251 ERBB4Q15303 1308 aa23.82■■□□□ 1.4
NEK2-205ENST00000540251 PRAMEF22A3QJZ6 481 aa23.81■■□□□ 1.4
NEK2-205ENST00000540251 EXOSC9Q06265 439 aaKnown RBP23.81■■□□□ 1.4
NEK2-205ENST00000540251 VAMP4O75379 141 aa23.8■■□□□ 1.4
NEK2-205ENST00000540251 TSPYL6Q8N831 410 aa23.8■■□□□ 1.4
NEK2-205ENST00000540251 AKT1S1Q96B36 256 aa23.8■■□□□ 1.4
NEK2-205ENST00000540251 ZNF428Q96B54 188 aa23.8■■□□□ 1.4
NEK2-205ENST00000540251 KCNQ4P56696 695 aa23.79■■□□□ 1.4
NEK2-205ENST00000540251 TWISTNBQ3B726 338 aaPredicted RBP23.79■■□□□ 1.4
NEK2-205ENST00000540251 INTS5Q6P9B9 1019 aaKnown RBP23.79■■□□□ 1.4
NEK2-205ENST00000540251 TUBGCP6Q96RT7 1819 aa23.78■■□□□ 1.4
NEK2-205ENST00000540251 CRKLP46109 303 aaKnown RBP23.78■■□□□ 1.4
NEK2-205ENST00000540251 CCDC87Q9NVE4 849 aa23.76■■□□□ 1.39
NEK2-205ENST00000540251 RPS6KA4O75676 772 aa23.75■■□□□ 1.39
NEK2-205ENST00000540251 PDIA6Q15084 440 aa23.74■■□□□ 1.39
NEK2-205ENST00000540251 YTHDC1Q96MU7 727 aaKnown RBP23.74■■□□□ 1.39
NEK2-205ENST00000540251 ELL2O00472 640 aaPredicted RBP23.73■■□□□ 1.39
NEK2-205ENST00000540251 IL6STP40189 918 aaPredicted RBP23.73■■□□□ 1.39
NEK2-205ENST00000540251 SLC15A2Q16348 729 aa23.73■■□□□ 1.39
NEK2-205ENST00000540251 HDGFL1Q5TGJ6 251 aa23.73■■□□□ 1.39
NEK2-205ENST00000540251 CCDC30Q5VVM6 783 aa23.73■■□□□ 1.39
NEK2-205ENST00000540251 LRP10Q7Z4F1 713 aa23.73■■□□□ 1.39
NEK2-205ENST00000540251 NBPF26B4DH59 902 aa23.72■■□□□ 1.39
NEK2-205ENST00000540251 A1BGP04217 495 aa23.72■■□□□ 1.39
NEK2-205ENST00000540251 EIF5P55010 431 aaKnown RBP23.72■■□□□ 1.39
NEK2-205ENST00000540251 NBPF14Q5TI25 921 aa23.72■■□□□ 1.39
NEK2-205ENST00000540251 NBPF10Q6P3W6 841 aaKnown RBP23.72■■□□□ 1.39
NEK2-205ENST00000540251 NBPF15Q8N660 670 aa23.72■■□□□ 1.39
NEK2-205ENST00000540251 DDX21Q9NR30 783 aaKnown RBP eCLIP23.72■■□□□ 1.39
NEK2-205ENST00000540251 ZBTB1Q9Y2K1 713 aa23.72■■□□□ 1.39
NEK2-205ENST00000540251 ADRA2BP18089 450 aa23.71■■□□□ 1.39
NEK2-205ENST00000540251 ZNF827Q17R98 1081 aa23.71■■□□□ 1.39
NEK2-205ENST00000540251 ANO8Q9HCE9 1232 aaPredicted RBP23.71■■□□□ 1.39
NEK2-205ENST00000540251 DBF4Q9UBU7 674 aaPredicted RBP23.71■■□□□ 1.39
NEK2-205ENST00000540251 EIF2S2P20042 333 aaKnown RBP23.7■■□□□ 1.38
NEK2-205ENST00000540251 SSFA2P28290 1259 aa23.7■■□□□ 1.38
NEK2-205ENST00000540251 C4AP0C0L4 1744 aa23.69■■□□□ 1.38
NEK2-205ENST00000540251 BRPF1P55201 1214 aaPredicted RBP23.69■■□□□ 1.38
NEK2-205ENST00000540251 ALDH1L2Q3SY69 923 aa23.69■■□□□ 1.38
NEK2-205ENST00000540251 FLAD1Q8NFF5 587 aa23.69■■□□□ 1.38
NEK2-205ENST00000540251 AK7Q96M32 723 aa23.69■■□□□ 1.38
NEK2-205ENST00000540251 STK32BQ9NY57 414 aa23.69■■□□□ 1.38
NEK2-205ENST00000540251 RTCBQ9Y3I0 505 aaKnown RBP23.69■■□□□ 1.38
NEK2-205ENST00000540251 RGL2O15211 777 aa23.67■■□□□ 1.38
NEK2-205ENST00000540251 HYPKQ9NX55 129 aa23.67■■□□□ 1.38
NEK2-205ENST00000540251 GNPATO15228 680 aa23.66■■□□□ 1.38
NEK2-205ENST00000540251 AMIGO3Q86WK7 504 aa23.66■■□□□ 1.38
NEK2-205ENST00000540251 CHPF2Q9P2E5 772 aa23.66■■□□□ 1.38
NEK2-205ENST00000540251 CANXP27824 592 aaKnown RBP23.65■■□□□ 1.38
NEK2-205ENST00000540251 COL15A1P39059 1388 aa23.65■■□□□ 1.38
NEK2-205ENST00000540251 A0A087WZG4 1122 aa23.64■■□□□ 1.38
NEK2-205ENST00000540251 STK31Q9BXU1 1019 aa23.64■■□□□ 1.38
NEK2-205ENST00000540251 TFCP2L1Q9NZI6 479 aa23.64■■□□□ 1.38
NEK2-205ENST00000540251 PNPLA7Q6ZV29 1317 aa23.64■■□□□ 1.37
NEK2-205ENST00000540251 BCORQ6W2J9 1755 aa23.64■■□□□ 1.37
NEK2-205ENST00000540251 CASZ1Q86V15 1759 aa23.64■■□□□ 1.37
NEK2-205ENST00000540251 COL24A1Q17RW2 1714 aa23.63■■□□□ 1.37
NEK2-205ENST00000540251 RARSP54136 660 aaKnown RBP23.63■■□□□ 1.37
NEK2-205ENST00000540251 PROSER3Q2NL68 480 aa23.63■■□□□ 1.37
NEK2-205ENST00000540251 TRAPPC3LQ5T215 181 aa23.63■■□□□ 1.37
NEK2-205ENST00000540251 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.62■■□□□ 1.37
NEK2-205ENST00000540251 ARHGEF1Q92888 912 aaKnown RBP23.62■■□□□ 1.37
NEK2-205ENST00000540251 NUP98P52948 1817 aa23.62■■□□□ 1.37
NEK2-205ENST00000540251 SLC4A2P04920 1241 aa23.61■■□□□ 1.37
NEK2-205ENST00000540251 SSH1Q8WYL5 1049 aa23.61■■□□□ 1.37
NEK2-205ENST00000540251 NECTIN2Q92692 538 aa23.61■■□□□ 1.37
NEK2-205ENST00000540251 SCN7AQ01118 1682 aa23.61■■□□□ 1.37
NEK2-205ENST00000540251 COL23A1Q86Y22 540 aaPredicted RBP23.6■■□□□ 1.37
NEK2-205ENST00000540251 MRPL50Q8N5N7 158 aaKnown RBP23.6■■□□□ 1.37
NEK2-205ENST00000540251 NARFQ9UHQ1 456 aa23.6■■□□□ 1.37
NEK2-205ENST00000540251 MYL6BP14649 208 aa23.59■■□□□ 1.37
NEK2-205ENST00000540251 PIP4K2AP48426 406 aaPredicted RBP23.59■■□□□ 1.37
NEK2-205ENST00000540251 SLC16A10Q8TF71 515 aa23.59■■□□□ 1.37
NEK2-205ENST00000540251 ERVV-1B6SEH8 477 aa23.59■■□□□ 1.37
NEK2-205ENST00000540251 ANXA1P04083 346 aa23.59■■□□□ 1.37
NEK2-205ENST00000540251 USP42Q9H9J4 1324 aaKnown RBP23.58■■□□□ 1.37
NEK2-205ENST00000540251 COPS6Q7L5N1 327 aa23.58■■□□□ 1.36
NEK2-205ENST00000540251 CLEC4GQ6UXB4 293 aa23.57■■□□□ 1.36
NEK2-205ENST00000540251 NPM2Q86SE8 214 aaKnown RBP23.57■■□□□ 1.36
NEK2-205ENST00000540251 DZIP3Q86Y13 1208 aaKnown RBP23.57■■□□□ 1.36
NEK2-205ENST00000540251 XAGE3Q8WTP9 111 aa23.57■■□□□ 1.36
NEK2-205ENST00000540251 PHAXQ9H814 394 aaKnown RBP23.57■■□□□ 1.36
NEK2-205ENST00000540251 ARFGEF2Q9Y6D5 1785 aa23.56■■□□□ 1.36
NEK2-205ENST00000540251 CAMTA2O94983 1202 aa23.56■■□□□ 1.36
NEK2-205ENST00000540251 RFC4P35249 363 aa23.56■■□□□ 1.36
NEK2-205ENST00000540251 MAP3K15Q6ZN16 1313 aa23.56■■□□□ 1.36
NEK2-205ENST00000540251 ANKRD36CQ5JPF3 1778 aa23.55■■□□□ 1.36
NEK2-205ENST00000540251 FLIIQ13045 1269 aa23.55■■□□□ 1.36
NEK2-205ENST00000540251 TTLL7Q6ZT98 887 aa23.55■■□□□ 1.36
NEK2-205ENST00000540251 SMIM5Q71RC9 77 aa23.55■■□□□ 1.36
NEK2-205ENST00000540251 G2E3Q7L622 706 aa23.55■■□□□ 1.36
NEK2-205ENST00000540251 PLBD2Q8NHP8 589 aa23.55■■□□□ 1.36
NEK2-205ENST00000540251 PTPRCP08575 1304 aa23.54■■□□□ 1.36
NEK2-205ENST00000540251 TCERG1O14776 1098 aaKnown RBP23.54■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms