RNA–Protein interactions for RNA: ENST00000540240.1

C16orf62-212, Transcript of UPF0505 protein C16orf62, humanhuman

TSL 3

Gene C16orf62, Length 633 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C16orf62-212ENST00000540240 SNIP1Q8TAD8 396 aaKnown RBP11.42□□□□□ -0.58
C16orf62-212ENST00000540240 STK26Q9P289 416 aa11.42□□□□□ -0.58
C16orf62-212ENST00000540240 MARF1Q9Y4F3 1742 aaKnown RBP11.42□□□□□ -0.58
C16orf62-212ENST00000540240 CCDC144AA2RUR9 1427 aa11.42□□□□□ -0.58
C16orf62-212ENST00000540240 ADGRF5Q8IZF2 1346 aa11.41□□□□□ -0.58
C16orf62-212ENST00000540240 PSME1Q06323 249 aa11.41□□□□□ -0.58
C16orf62-212ENST00000540240 RGL3Q3MIN7 710 aa11.41□□□□□ -0.58
C16orf62-212ENST00000540240 WAPLQ7Z5K2 1190 aa11.41□□□□□ -0.58
C16orf62-212ENST00000540240 SPATA31A3Q5VYP0 1347 aa11.4□□□□□ -0.58
C16orf62-212ENST00000540240 HOXA2O43364 376 aa11.4□□□□□ -0.58
C16orf62-212ENST00000540240 XPCQ01831 940 aaPredicted RBP11.4□□□□□ -0.58
C16orf62-212ENST00000540240 KRT28Q7Z3Y7 464 aa11.4□□□□□ -0.58
C16orf62-212ENST00000540240 CCDC24Q8N4L8 307 aa11.4□□□□□ -0.58
C16orf62-212ENST00000540240 SYMPKQ92797 1274 aaKnown RBP11.4□□□□□ -0.58
C16orf62-212ENST00000540240 CCDC102AQ96A19 550 aa11.39□□□□□ -0.59
C16orf62-212ENST00000540240 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.39□□□□□ -0.59
C16orf62-212ENST00000540240 SPATA31E1Q6ZUB1 1445 aa11.38□□□□□ -0.59
C16orf62-212ENST00000540240 SKOR1P84550 965 aa11.38□□□□□ -0.59
C16orf62-212ENST00000540240 SF3B2Q13435 895 aaKnown RBP11.38□□□□□ -0.59
C16orf62-212ENST00000540240 TMEM132EQ6IEE7 984 aa11.38□□□□□ -0.59
C16orf62-212ENST00000540240 MPHOSPH9Q99550 1183 aa11.38□□□□□ -0.59
C16orf62-212ENST00000540240 KIF1AQ12756 1690 aa11.38□□□□□ -0.59
C16orf62-212ENST00000540240 SLIT2O94813 1529 aa11.38□□□□□ -0.59
C16orf62-212ENST00000540240 KNDC1Q76NI1 1749 aa11.38□□□□□ -0.59
C16orf62-212ENST00000540240 MINK1Q8N4C8 1332 aaPredicted RBP11.37□□□□□ -0.59
C16orf62-212ENST00000540240 BLMP54132 1417 aaPredicted RBP11.37□□□□□ -0.59
C16orf62-212ENST00000540240 HPS1Q92902 700 aa11.37□□□□□ -0.59
C16orf62-212ENST00000540240 DHX57Q6P158 1386 aaKnown RBP11.37□□□□□ -0.59
C16orf62-212ENST00000540240 PIK3C2GO75747 1445 aa11.36□□□□□ -0.59
C16orf62-212ENST00000540240 YTHDC2Q9H6S0 1430 aaKnown RBP11.36□□□□□ -0.59
C16orf62-212ENST00000540240 FMN2Q9NZ56 1722 aa11.36□□□□□ -0.59
C16orf62-212ENST00000540240 USP46P62068 366 aa11.36□□□□□ -0.59
C16orf62-212ENST00000540240 VPS72Q15906 364 aa11.36□□□□□ -0.59
C16orf62-212ENST00000540240 C14orf93Q9H972 538 aaKnown RBP11.36□□□□□ -0.59
C16orf62-212ENST00000540240 ATP13A2Q9NQ11 1180 aa11.36□□□□□ -0.59
C16orf62-212ENST00000540240 RALGAPBQ86X10 1494 aa11.36□□□□□ -0.59
C16orf62-212ENST00000540240 IFT172Q9UG01 1749 aa11.35□□□□□ -0.59
C16orf62-212ENST00000540240 SNRPBP14678 240 aaKnown RBP11.35□□□□□ -0.59
C16orf62-212ENST00000540240 RC3H1Q5TC82 1133 aaKnown RBP11.35□□□□□ -0.59
C16orf62-212ENST00000540240 SBNO1A3KN83 1393 aa11.35□□□□□ -0.59
C16orf62-212ENST00000540240 PLEKHH1Q9ULM0 1364 aa11.35□□□□□ -0.59
C16orf62-212ENST00000540240 ARHGEF10O15013 1369 aa11.34□□□□□ -0.59
C16orf62-212ENST00000540240 WFS1O76024 890 aa11.34□□□□□ -0.59
C16orf62-212ENST00000540240 SEPT12Q8IYM1 358 aa11.34□□□□□ -0.59
C16orf62-212ENST00000540240 FAM217BQ9NTX9 383 aaPredicted RBP11.34□□□□□ -0.59
C16orf62-212ENST00000540240 TNS3Q68CZ2 1445 aa11.34□□□□□ -0.59
C16orf62-212ENST00000540240 GLI3P10071 1580 aa11.33□□□□□ -0.6
C16orf62-212ENST00000540240 NFX1Q12986 1120 aaKnown RBP11.33□□□□□ -0.6
C16orf62-212ENST00000540240 CCDC9Q9Y3X0 531 aaKnown RBP11.33□□□□□ -0.6
C16orf62-212ENST00000540240 USP32Q8NFA0 1604 aa11.33□□□□□ -0.6
C16orf62-212ENST00000540240 JUNDP17535 347 aa11.32□□□□□ -0.6
C16orf62-212ENST00000540240 KRT27Q7Z3Y8 459 aa11.32□□□□□ -0.6
C16orf62-212ENST00000540240 REPIN1Q9BWE0 567 aaKnown RBP11.32□□□□□ -0.6
C16orf62-212ENST00000540240 GPCPD1Q9NPB8 672 aa11.32□□□□□ -0.6
C16orf62-212ENST00000540240 POGKQ9P215 609 aa11.32□□□□□ -0.6
C16orf62-212ENST00000540240 CFAP70Q5T0N1 1121 aa11.31□□□□□ -0.6
C16orf62-212ENST00000540240 LCE2CQ5TA81 110 aa11.31□□□□□ -0.6
C16orf62-212ENST00000540240 PTCRAQ6ISU1 281 aaPredicted RBP11.31□□□□□ -0.6
C16orf62-212ENST00000540240 NWD2Q9ULI1 1742 aa11.31□□□□□ -0.6
C16orf62-212ENST00000540240 NRXN1Q9ULB1 1477 aa11.31□□□□□ -0.6
C16orf62-212ENST00000540240 ANKARQ7Z5J8 1434 aa11.3□□□□□ -0.6
C16orf62-212ENST00000540240 DEFB132Q7Z7B7 95 aa11.3□□□□□ -0.6
C16orf62-212ENST00000540240 CABLES1Q8TDN4 633 aa11.3□□□□□ -0.6
C16orf62-212ENST00000540240 PRAM1Q96QH2 718 aa11.3□□□□□ -0.6
C16orf62-212ENST00000540240 FAM83GA6ND36 823 aa11.29□□□□□ -0.6
C16orf62-212ENST00000540240 CLCN1P35523 988 aa11.29□□□□□ -0.6
C16orf62-212ENST00000540240 BAG6P46379 1132 aa11.29□□□□□ -0.6
C16orf62-212ENST00000540240 PCDHGC3Q9UN70 934 aa11.29□□□□□ -0.6
C16orf62-212ENST00000540240 DLC1Q96QB1 1528 aa11.29□□□□□ -0.6
C16orf62-212ENST00000540240 EIF3AQ14152 1382 aaKnown RBP11.28□□□□□ -0.6
C16orf62-212ENST00000540240 GPRASP1Q5JY77 1395 aa11.28□□□□□ -0.6
C16orf62-212ENST00000540240 RGPD8O14715 1765 aaPredicted RBP11.28□□□□□ -0.6
C16orf62-212ENST00000540240 BRWD3Q6RI45 1802 aa11.28□□□□□ -0.6
C16orf62-212ENST00000540240 TULP1O00294 542 aaPredicted RBP11.28□□□□□ -0.6
C16orf62-212ENST00000540240 WNT7BP56706 349 aa11.28□□□□□ -0.6
C16orf62-212ENST00000540240 SAFB2Q14151 953 aaKnown RBP eCLIP11.28□□□□□ -0.6
C16orf62-212ENST00000540240 PMFBP1Q8TBY8 1022 aa11.28□□□□□ -0.6
C16orf62-212ENST00000540240 PLCH1Q4KWH8 1693 aa11.27□□□□□ -0.6
C16orf62-212ENST00000540240 TRIM47Q96LD4 638 aa11.27□□□□□ -0.61
C16orf62-212ENST00000540240 ALDH1A1P00352 501 aa11.26□□□□□ -0.61
C16orf62-212ENST00000540240 RETREG3Q86VR2 466 aa11.26□□□□□ -0.61
C16orf62-212ENST00000540240 NUTM1Q86Y26 1132 aa11.26□□□□□ -0.61
C16orf62-212ENST00000540240 NUDT12Q9BQG2 462 aa11.26□□□□□ -0.61
C16orf62-212ENST00000540240 BTG4Q9NY30 223 aa11.26□□□□□ -0.61
C16orf62-212ENST00000540240 ADGRB2O60241 1585 aa11.24□□□□□ -0.61
C16orf62-212ENST00000540240 ABCA3Q99758 1704 aa11.24□□□□□ -0.61
C16orf62-212ENST00000540240 COL14A1Q05707 1796 aaKnown RBP11.24□□□□□ -0.61
C16orf62-212ENST00000540240 SIAH2O43255 324 aa11.24□□□□□ -0.61
C16orf62-212ENST00000540240 FDX1P10109 184 aa11.24□□□□□ -0.61
C16orf62-212ENST00000540240 VSIG10Q8N0Z9 540 aa11.24□□□□□ -0.61
C16orf62-212ENST00000540240 NGDNQ8NEJ9 315 aaKnown RBP11.24□□□□□ -0.61
C16orf62-212ENST00000540240 TRAK1Q9UPV9 953 aa11.24□□□□□ -0.61
C16orf62-212ENST00000540240 LRP5O75197 1615 aa11.24□□□□□ -0.61
C16orf62-212ENST00000540240 WASLO00401 505 aaPredicted RBP11.23□□□□□ -0.61
C16orf62-212ENST00000540240 KRI1Q8N9T8 703 aaKnown RBP11.23□□□□□ -0.61
C16orf62-212ENST00000540240 C6orf229H3BNL8 230 aa11.22□□□□□ -0.61
C16orf62-212ENST00000540240 NDUFV2P19404 249 aa11.22□□□□□ -0.61
C16orf62-212ENST00000540240 SPATA31A5Q5VU36 1347 aa11.22□□□□□ -0.61
C16orf62-212ENST00000540240 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.22□□□□□ -0.61
C16orf62-212ENST00000540240 SPATA31A7Q8IWB4 1347 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms