RNA–Protein interactions for RNA: ENST00000539736.5

C12orf43-208, Transcript of chromosome 12 open reading frame 43, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene C12orf43, Length 1,033 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf43-208ENST00000539736 BRPF1P55201 1214 aaPredicted RBP27.44■■□□□ 1.98
C12orf43-208ENST00000539736 SF3B2Q13435 895 aaKnown RBP27.43■■□□□ 1.98
C12orf43-208ENST00000539736 STK31Q9BXU1 1019 aa27.43■■□□□ 1.98
C12orf43-208ENST00000539736 CACNA1FO60840 1977 aa27.42■■□□□ 1.98
C12orf43-208ENST00000539736 HMGB2P26583 209 aaKnown RBP27.42■■□□□ 1.98
C12orf43-208ENST00000539736 NECTIN2Q92692 538 aa27.42■■□□□ 1.98
C12orf43-208ENST00000539736 SMC4Q9NTJ3 1288 aa27.42■■□□□ 1.98
C12orf43-208ENST00000539736 DBF4Q9UBU7 674 aaPredicted RBP27.42■■□□□ 1.98
C12orf43-208ENST00000539736 COL5A3P25940 1745 aaPredicted RBP27.41■■□□□ 1.98
C12orf43-208ENST00000539736 MRPL50Q8N5N7 158 aaKnown RBP27.41■■□□□ 1.98
C12orf43-208ENST00000539736 TCERG1O14776 1098 aaKnown RBP27.4■■□□□ 1.98
C12orf43-208ENST00000539736 BCAR3O75815 825 aa27.4■■□□□ 1.98
C12orf43-208ENST00000539736 TXNRD1Q16881 649 aa27.4■■□□□ 1.98
C12orf43-208ENST00000539736 PROM2Q8N271 834 aa27.4■■□□□ 1.98
C12orf43-208ENST00000539736 DDX21Q9NR30 783 aaKnown RBP eCLIP27.4■■□□□ 1.98
C12orf43-208ENST00000539736 CHPF2Q9P2E5 772 aa27.4■■□□□ 1.98
C12orf43-208ENST00000539736 SRCAPQ6ZRS2 3230 aa27.4■■□□□ 1.98
C12orf43-208ENST00000539736 SLC4A2P04920 1241 aa27.39■■□□□ 1.98
C12orf43-208ENST00000539736 PDIA6Q15084 440 aa27.39■■□□□ 1.98
C12orf43-208ENST00000539736 BCL2L13Q9BXK5 485 aa27.39■■□□□ 1.98
C12orf43-208ENST00000539736 LRRC4BQ9NT99 713 aa27.39■■□□□ 1.98
C12orf43-208ENST00000539736 TAF1LQ8IZX4 1826 aa27.39■■□□□ 1.97
C12orf43-208ENST00000539736 A1BGP04217 495 aa27.38■■□□□ 1.97
C12orf43-208ENST00000539736 LINC00116Q8NCU8 138 aa27.38■■□□□ 1.97
C12orf43-208ENST00000539736 BAG6P46379 1132 aa27.37■■□□□ 1.97
C12orf43-208ENST00000539736 KCNQ4P56696 695 aa27.37■■□□□ 1.97
C12orf43-208ENST00000539736 RC3H1Q5TC82 1133 aaKnown RBP27.37■■□□□ 1.97
C12orf43-208ENST00000539736 CAMKK2Q96RR4 588 aa27.37■■□□□ 1.97
C12orf43-208ENST00000539736 HYPKQ9NX55 129 aa27.37■■□□□ 1.97
C12orf43-208ENST00000539736 CNTNAP4Q9C0A0 1308 aa27.37■■□□□ 1.97
C12orf43-208ENST00000539736 RREB1Q92766 1687 aa27.36■■□□□ 1.97
C12orf43-208ENST00000539736 NBPF26B4DH59 902 aa27.36■■□□□ 1.97
C12orf43-208ENST00000539736 CRKLP46109 303 aaKnown RBP27.36■■□□□ 1.97
C12orf43-208ENST00000539736 NBPF14Q5TI25 921 aa27.36■■□□□ 1.97
C12orf43-208ENST00000539736 NBPF10Q6P3W6 841 aaKnown RBP27.36■■□□□ 1.97
C12orf43-208ENST00000539736 INTS5Q6P9B9 1019 aaKnown RBP27.36■■□□□ 1.97
C12orf43-208ENST00000539736 NBPF15Q8N660 670 aa27.36■■□□□ 1.97
C12orf43-208ENST00000539736 CCDC87Q9NVE4 849 aa27.35■■□□□ 1.97
C12orf43-208ENST00000539736 KIF16BQ96L93 1317 aa27.35■■□□□ 1.97
C12orf43-208ENST00000539736 PROSER3Q2NL68 480 aa27.34■■□□□ 1.97
C12orf43-208ENST00000539736 LRP10Q7Z4F1 713 aa27.34■■□□□ 1.97
C12orf43-208ENST00000539736 EN1Q05925 392 aaPredicted RBP27.33■■□□□ 1.97
C12orf43-208ENST00000539736 MYH14Q7Z406 1995 aaKnown RBP27.33■■□□□ 1.97
C12orf43-208ENST00000539736 ANXA1P04083 346 aa27.32■■□□□ 1.96
C12orf43-208ENST00000539736 MYL6BP14649 208 aa27.32■■□□□ 1.96
C12orf43-208ENST00000539736 UPF1Q92900 1129 aaKnown RBP eCLIP27.32■■□□□ 1.96
C12orf43-208ENST00000539736 ZBTB1Q9Y2K1 713 aa27.32■■□□□ 1.96
C12orf43-208ENST00000539736 RNF123Q5XPI4 1314 aa27.32■■□□□ 1.96
C12orf43-208ENST00000539736 C4BP0C0L5 1744 aa27.32■■□□□ 1.96
C12orf43-208ENST00000539736 IL6STP40189 918 aaPredicted RBP27.31■■□□□ 1.96
C12orf43-208ENST00000539736 EZH2Q15910 746 aaKnown RBP27.31■■□□□ 1.96
C12orf43-208ENST00000539736 NOB1Q9ULX3 412 aaKnown RBP27.31■■□□□ 1.96
C12orf43-208ENST00000539736 SUPT16HQ9Y5B9 1047 aaKnown RBP27.31■■□□□ 1.96
C12orf43-208ENST00000539736 IPO8O15397 1037 aaKnown RBP27.3■■□□□ 1.96
C12orf43-208ENST00000539736 CANXP27824 592 aaKnown RBP27.3■■□□□ 1.96
C12orf43-208ENST00000539736 PIP4K2AP48426 406 aaPredicted RBP27.3■■□□□ 1.96
C12orf43-208ENST00000539736 G2E3Q7L622 706 aa27.3■■□□□ 1.96
C12orf43-208ENST00000539736 GOLGA6L2Q8N9W4 650 aaPredicted RBP27.3■■□□□ 1.96
C12orf43-208ENST00000539736 ARHGAP45Q92619 1136 aa27.3■■□□□ 1.96
C12orf43-208ENST00000539736 PTPRCP08575 1304 aa27.3■■□□□ 1.96
C12orf43-208ENST00000539736 FLIIQ13045 1269 aa27.29■■□□□ 1.96
C12orf43-208ENST00000539736 DEFB132Q7Z7B7 95 aa27.29■■□□□ 1.96
C12orf43-208ENST00000539736 PHAXQ9H814 394 aaKnown RBP27.29■■□□□ 1.96
C12orf43-208ENST00000539736 EIF5P55010 431 aaKnown RBP27.28■■□□□ 1.96
C12orf43-208ENST00000539736 RRP1P56182 461 aaKnown RBP27.28■■□□□ 1.96
C12orf43-208ENST00000539736 RPS6KA4O75676 772 aa27.27■■□□□ 1.96
C12orf43-208ENST00000539736 ZKSCAN2Q63HK3 967 aa27.27■■□□□ 1.96
C12orf43-208ENST00000539736 FRAT1Q92837 279 aaPredicted RBP27.27■■□□□ 1.96
C12orf43-208ENST00000539736 COPS6Q7L5N1 327 aa27.26■■□□□ 1.95
C12orf43-208ENST00000539736 XAGE3Q8WTP9 111 aa27.26■■□□□ 1.95
C12orf43-208ENST00000539736 AK7Q96M32 723 aa27.25■■□□□ 1.95
C12orf43-208ENST00000539736 API5Q9BZZ5 524 aaKnown RBP27.25■■□□□ 1.95
C12orf43-208ENST00000539736 ATF7IPQ6VMQ6 1270 aa27.24■■□□□ 1.95
C12orf43-208ENST00000539736 GNPATO15228 680 aa27.23■■□□□ 1.95
C12orf43-208ENST00000539736 DDX58O95786 925 aaKnown RBP27.23■■□□□ 1.95
C12orf43-208ENST00000539736 FKBP5Q13451 457 aaPredicted RBP27.23■■□□□ 1.95
C12orf43-208ENST00000539736 NPM2Q86SE8 214 aaKnown RBP27.23■■□□□ 1.95
C12orf43-208ENST00000539736 AKT1S1Q96B36 256 aa27.23■■□□□ 1.95
C12orf43-208ENST00000539736 RTCBQ9Y3I0 505 aaKnown RBP27.23■■□□□ 1.95
C12orf43-208ENST00000539736 A0A087WZG4 1122 aa27.22■■□□□ 1.95
C12orf43-208ENST00000539736 PLIN1O60240 522 aa27.22■■□□□ 1.95
C12orf43-208ENST00000539736 AIMP1Q12904 312 aaKnown RBP27.22■■□□□ 1.95
C12orf43-208ENST00000539736 TRIM27P14373 513 aa27.21■■□□□ 1.95
C12orf43-208ENST00000539736 ZNF330Q9Y3S2 320 aaPredicted RBP27.21■■□□□ 1.95
C12orf43-208ENST00000539736 NUP188Q5SRE5 1749 aa27.21■■□□□ 1.95
C12orf43-208ENST00000539736 COL15A1P39059 1388 aa27.21■■□□□ 1.95
C12orf43-208ENST00000539736 MS4A1P11836 297 aa27.2■■□□□ 1.94
C12orf43-208ENST00000539736 ADRA2BP18089 450 aa27.2■■□□□ 1.94
C12orf43-208ENST00000539736 KSR2Q6VAB6 950 aa27.2■■□□□ 1.94
C12orf43-208ENST00000539736 UBR3Q6ZT12 1888 aa27.2■■□□□ 1.94
C12orf43-208ENST00000539736 TTLL7Q6ZT98 887 aa27.2■■□□□ 1.94
C12orf43-208ENST00000539736 ANKRD13DQ6ZTN6 518 aa27.2■■□□□ 1.94
C12orf43-208ENST00000539736 PDE3AQ14432 1141 aa27.19■■□□□ 1.94
C12orf43-208ENST00000539736 PLBD2Q8NHP8 589 aa27.19■■□□□ 1.94
C12orf43-208ENST00000539736 ADCY9O60503 1353 aa27.19■■□□□ 1.94
C12orf43-208ENST00000539736 PI4KAP2A4QPH2 592 aa27.18■■□□□ 1.94
C12orf43-208ENST00000539736 SSFA2P28290 1259 aa27.18■■□□□ 1.94
C12orf43-208ENST00000539736 ZNF827Q17R98 1081 aa27.18■■□□□ 1.94
C12orf43-208ENST00000539736 KIF6Q6ZMV9 814 aa27.18■■□□□ 1.94
C12orf43-208ENST00000539736 DZIP3Q86Y13 1208 aaKnown RBP27.18■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms