RNA–Protein interactions for RNA: ENST00000539413.1

CIT-210, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-210ENST00000539413 WDR43Q15061 677 aaKnown RBP eCLIP20.71■□□□□ 0.91
CIT-210ENST00000539413 TAF7Q15545 349 aaPredicted RBP20.71■□□□□ 0.91
CIT-210ENST00000539413 CCDC146Q8IYE0 955 aa20.71■□□□□ 0.91
CIT-210ENST00000539413 THUMPD2Q9BTF0 503 aaKnown RBP20.71■□□□□ 0.91
CIT-210ENST00000539413 TEX13AQ9BXU3 409 aaPredicted RBP20.71■□□□□ 0.91
CIT-210ENST00000539413 CD2APQ9Y5K6 639 aa20.71■□□□□ 0.91
CIT-210ENST00000539413 COL15A1P39059 1388 aa20.71■□□□□ 0.91
CIT-210ENST00000539413 MIS18AQ9NYP9 233 aa20.7■□□□□ 0.9
CIT-210ENST00000539413 PRAMEF22A3QJZ6 481 aa20.69■□□□□ 0.9
CIT-210ENST00000539413 FKBP8Q14318 412 aa20.69■□□□□ 0.9
CIT-210ENST00000539413 ADAMTS8Q9UP79 889 aa20.69■□□□□ 0.9
CIT-210ENST00000539413 RIPK4P57078 832 aa20.68■□□□□ 0.9
CIT-210ENST00000539413 USPL1Q5W0Q7 1092 aa20.68■□□□□ 0.9
CIT-210ENST00000539413 ZPR1O75312 459 aa20.67■□□□□ 0.9
CIT-210ENST00000539413 A1BGP04217 495 aa20.67■□□□□ 0.9
CIT-210ENST00000539413 TMPOP42166 694 aaKnown RBP20.67■□□□□ 0.9
CIT-210ENST00000539413 EIF5P55010 431 aaKnown RBP20.67■□□□□ 0.9
CIT-210ENST00000539413 GPR162Q16538 588 aa20.67■□□□□ 0.9
CIT-210ENST00000539413 PELP1Q8IZL8 1130 aaKnown RBP20.67■□□□□ 0.9
CIT-210ENST00000539413 NARFQ9UHQ1 456 aa20.67■□□□□ 0.9
CIT-210ENST00000539413 USP16Q9Y5T5 823 aa20.67■□□□□ 0.9
CIT-210ENST00000539413 RUNDC1Q96C34 613 aa20.66■□□□□ 0.9
CIT-210ENST00000539413 RRP7AQ9Y3A4 280 aaKnown RBP20.66■□□□□ 0.9
CIT-210ENST00000539413 PARP3Q9Y6F1 533 aa20.66■□□□□ 0.9
CIT-210ENST00000539413 KDM3BQ7LBC6 1761 aa20.66■□□□□ 0.9
CIT-210ENST00000539413 SNRPA1P09661 255 aaKnown RBP20.65■□□□□ 0.9
CIT-210ENST00000539413 PNISRQ8TF01 805 aaKnown RBP20.65■□□□□ 0.9
CIT-210ENST00000539413 DDR1Q08345 913 aa20.64■□□□□ 0.89
CIT-210ENST00000539413 NEUROD2Q15784 382 aa20.64■□□□□ 0.89
CIT-210ENST00000539413 BCL2L12Q9HB09 334 aa20.64■□□□□ 0.89
CIT-210ENST00000539413 ZNF330Q9Y3S2 320 aaPredicted RBP20.64■□□□□ 0.89
CIT-210ENST00000539413 C10orf71Q711Q0 1435 aa20.63■□□□□ 0.89
CIT-210ENST00000539413 TM4SF1P30408 202 aa20.63■□□□□ 0.89
CIT-210ENST00000539413 IL6STP40189 918 aaPredicted RBP20.63■□□□□ 0.89
CIT-210ENST00000539413 PIP4K2AP48426 406 aaPredicted RBP20.63■□□□□ 0.89
CIT-210ENST00000539413 YBX3P16989 372 aaKnown RBP eCLIP20.62■□□□□ 0.89
CIT-210ENST00000539413 YY1P25490 414 aa20.62■□□□□ 0.89
CIT-210ENST00000539413 LMOD3Q0VAK6 560 aa20.62■□□□□ 0.89
CIT-210ENST00000539413 CCDC184Q52MB2 194 aa20.62■□□□□ 0.89
CIT-210ENST00000539413 A0A087WZG4 1122 aa20.61■□□□□ 0.89
CIT-210ENST00000539413 TBC1D2BQ9UPU7 963 aa20.61■□□□□ 0.89
CIT-210ENST00000539413 KIF13BQ9NQT8 1826 aa20.61■□□□□ 0.89
CIT-210ENST00000539413 POLRMTO00411 1230 aaKnown RBP20.6■□□□□ 0.89
CIT-210ENST00000539413 EIF4A1P60842 406 aaKnown RBP20.6■□□□□ 0.89
CIT-210ENST00000539413 WWC3Q9ULE0 1092 aa20.6■□□□□ 0.89
CIT-210ENST00000539413 KIAA1551Q9HCM1 1747 aa20.6■□□□□ 0.89
CIT-210ENST00000539413 PXDNLA1KZ92 1463 aa20.6■□□□□ 0.89
CIT-210ENST00000539413 SCN7AQ01118 1682 aa20.6■□□□□ 0.89
CIT-210ENST00000539413 NFIXQ14938 502 aa20.59■□□□□ 0.89
CIT-210ENST00000539413 TRIM35Q9UPQ4 493 aa20.59■□□□□ 0.89
CIT-210ENST00000539413 LAMB4A4D0S4 1761 aa20.59■□□□□ 0.89
CIT-210ENST00000539413 NBPF26B4DH59 902 aa20.58■□□□□ 0.89
CIT-210ENST00000539413 GIGYF1O75420 1035 aaPredicted RBP20.58■□□□□ 0.89
CIT-210ENST00000539413 NBPF10Q6P3W6 841 aaKnown RBP20.58■□□□□ 0.89
CIT-210ENST00000539413 NBPF15Q8N660 670 aa20.58■□□□□ 0.89
CIT-210ENST00000539413 TSPYL4Q9UJ04 414 aa20.58■□□□□ 0.89
CIT-210ENST00000539413 ANP32CO43423 234 aa20.57■□□□□ 0.88
CIT-210ENST00000539413 TGFB2P61812 414 aa20.57■□□□□ 0.88
CIT-210ENST00000539413 NPM2Q86SE8 214 aaKnown RBP20.57■□□□□ 0.88
CIT-210ENST00000539413 A0A0G2JLW4 131 aa20.56■□□□□ 0.88
CIT-210ENST00000539413 BICDL1Q6ZP65 573 aa20.56■□□□□ 0.88
CIT-210ENST00000539413 DZIP3Q86Y13 1208 aaKnown RBP20.56■□□□□ 0.88
CIT-210ENST00000539413 N4BP2Q86UW6 1770 aaPredicted RBP20.56■□□□□ 0.88
CIT-210ENST00000539413 GRIN3BO60391 1043 aa20.55■□□□□ 0.88
CIT-210ENST00000539413 CAMTA2O94983 1202 aa20.55■□□□□ 0.88
CIT-210ENST00000539413 TBC1D9BQ66K14 1250 aa20.55■□□□□ 0.88
CIT-210ENST00000539413 APAF1O14727 1248 aa20.54■□□□□ 0.88
CIT-210ENST00000539413 SERPINB2P05120 415 aa20.54■□□□□ 0.88
CIT-210ENST00000539413 DPEP1P16444 411 aa20.54■□□□□ 0.88
CIT-210ENST00000539413 BABAM1Q9NWV8 329 aa20.54■□□□□ 0.88
CIT-210ENST00000539413 BCORQ6W2J9 1755 aa20.54■□□□□ 0.88
CIT-210ENST00000539413 NRXN2Q9P2S2 1712 aa20.53■□□□□ 0.88
CIT-210ENST00000539413 UTRNP46939 3433 aa20.53■□□□□ 0.88
CIT-210ENST00000539413 AFDNP55196 1824 aaKnown RBP20.53■□□□□ 0.88
CIT-210ENST00000539413 GOLGB1Q14789 3259 aaKnown RBP20.52■□□□□ 0.88
CIT-210ENST00000539413 LAS1LQ9Y4W2 734 aaKnown RBP20.52■□□□□ 0.88
CIT-210ENST00000539413 CHL1O00533 1208 aa20.51■□□□□ 0.87
CIT-210ENST00000539413 KCNA3P22001 575 aa20.51■□□□□ 0.87
CIT-210ENST00000539413 MRS2Q9HD23 443 aa20.51■□□□□ 0.87
CIT-210ENST00000539413 CHD4Q14839 1912 aa20.5■□□□□ 0.87
CIT-210ENST00000539413 CARMIL3Q8ND23 1372 aa20.49■□□□□ 0.87
CIT-210ENST00000539413 CHRNA5P30532 468 aa20.49■□□□□ 0.87
CIT-210ENST00000539413 NGEFQ8N5V2 710 aa20.49■□□□□ 0.87
CIT-210ENST00000539413 BCS1LQ9Y276 419 aa20.49■□□□□ 0.87
CIT-210ENST00000539413 MYL6BP14649 208 aa20.48■□□□□ 0.87
CIT-210ENST00000539413 BRCA1P38398 1863 aaKnown RBP20.47■□□□□ 0.87
CIT-210ENST00000539413 EIF2S2P20042 333 aaKnown RBP20.47■□□□□ 0.87
CIT-210ENST00000539413 KRT24Q2M2I5 525 aa20.47■□□□□ 0.87
CIT-210ENST00000539413 SETDB2Q96T68 719 aa20.47■□□□□ 0.87
CIT-210ENST00000539413 CLEC4GQ6UXB4 293 aa20.46■□□□□ 0.87
CIT-210ENST00000539413 CCDC24Q8N4L8 307 aa20.46■□□□□ 0.87
CIT-210ENST00000539413 PIM2Q9P1W9 311 aa20.46■□□□□ 0.87
CIT-210ENST00000539413 ZNF652Q9Y2D9 606 aa20.46■□□□□ 0.87
CIT-210ENST00000539413 ERBB4Q15303 1308 aa20.46■□□□□ 0.87
CIT-210ENST00000539413 SENP3-EIF4A1A0A087X0R7 540 aa20.45■□□□□ 0.86
CIT-210ENST00000539413 HLFQ16534 295 aa20.45■□□□□ 0.86
CIT-210ENST00000539413 PRR5LQ6MZQ0 368 aa20.45■□□□□ 0.86
CIT-210ENST00000539413 TTLL7Q6ZT98 887 aa20.45■□□□□ 0.86
CIT-210ENST00000539413 CFAP44Q96MT7 982 aa20.45■□□□□ 0.86
CIT-210ENST00000539413 NECTIN2Q92692 538 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms