RNA–Protein interactions for RNA: ENST00000539019.1

SSPN-206, Transcript of sarcospan, humanhuman

TSL 1 (best)

Gene SSPN, Length 1,356 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPN-206ENST00000539019 PARP3Q9Y6F1 533 aa9.69□□□□□ -0.86
SSPN-206ENST00000539019 OGFOD1Q8N543 542 aa9.68□□□□□ -0.86
SSPN-206ENST00000539019 C1orf216Q8TAB5 229 aa9.68□□□□□ -0.86
SSPN-206ENST00000539019 ACDQ96AP0 544 aa9.68□□□□□ -0.86
SSPN-206ENST00000539019 CALR3Q96L12 384 aaKnown RBP9.68□□□□□ -0.86
SSPN-206ENST00000539019 DNAAF2Q9NVR5 837 aaKnown RBP9.68□□□□□ -0.86
SSPN-206ENST00000539019 PHF24Q9UPV7 400 aa9.68□□□□□ -0.86
SSPN-206ENST00000539019 EPHA4P54764 986 aa9.67□□□□□ -0.86
SSPN-206ENST00000539019 FOXK2Q01167 660 aa9.67□□□□□ -0.86
SSPN-206ENST00000539019 MAP3K10Q02779 954 aa9.67□□□□□ -0.86
SSPN-206ENST00000539019 NDFIP2Q9NV92 336 aa9.67□□□□□ -0.86
SSPN-206ENST00000539019 NSFL1CQ9UNZ2 370 aaKnown RBP9.67□□□□□ -0.86
SSPN-206ENST00000539019 PALM3A6NDB9 673 aaPredicted RBP9.66□□□□□ -0.86
SSPN-206ENST00000539019 BNIP3LO60238 219 aa9.66□□□□□ -0.86
SSPN-206ENST00000539019 NBPF1Q3BBV0 1214 aa9.66□□□□□ -0.86
SSPN-206ENST00000539019 TBCELQ5QJ74 424 aa9.66□□□□□ -0.86
SSPN-206ENST00000539019 LARGE2Q8N3Y3 721 aa9.66□□□□□ -0.86
SSPN-206ENST00000539019 ZDHHC1Q8WTX9 485 aa9.66□□□□□ -0.86
SSPN-206ENST00000539019 ABHD17AQ96GS6 310 aa9.66□□□□□ -0.86
SSPN-206ENST00000539019 ZCCHC2Q9C0B9 1178 aaKnown RBP9.66□□□□□ -0.86
SSPN-206ENST00000539019 MAFBQ9Y5Q3 323 aaPredicted RBP9.66□□□□□ -0.86
SSPN-206ENST00000539019 A0A1W2PNR3 127 aa9.65□□□□□ -0.86
SSPN-206ENST00000539019 KCNMA1Q12791 1236 aa9.65□□□□□ -0.86
SSPN-206ENST00000539019 ARSJQ5FYB0 599 aaPredicted RBP9.65□□□□□ -0.86
SSPN-206ENST00000539019 ZDHHC3Q9NYG2 299 aa9.65□□□□□ -0.86
SSPN-206ENST00000539019 ATXN7L1Q9ULK2 861 aaPredicted RBP9.65□□□□□ -0.86
SSPN-206ENST00000539019 BCRP11274 1271 aa9.64□□□□□ -0.87
SSPN-206ENST00000539019 TATP17735 454 aaPredicted RBP9.64□□□□□ -0.87
SSPN-206ENST00000539019 GSK3AP49840 483 aa9.64□□□□□ -0.87
SSPN-206ENST00000539019 TEAD4Q15561 434 aa9.64□□□□□ -0.87
SSPN-206ENST00000539019 NLRP8Q86W28 1048 aa9.64□□□□□ -0.87
SSPN-206ENST00000539019 SLC9A9Q8IVB4 645 aa9.64□□□□□ -0.87
SSPN-206ENST00000539019 KLRG1Q96E93 195 aa9.64□□□□□ -0.87
SSPN-206ENST00000539019 ZIC5Q96T25 663 aa9.64□□□□□ -0.87
SSPN-206ENST00000539019 PPP1R12CQ9BZL4 782 aa9.64□□□□□ -0.87
SSPN-206ENST00000539019 SHROOM4Q9ULL8 1493 aa9.63□□□□□ -0.87
SSPN-206ENST00000539019 DKK1O94907 266 aa9.63□□□□□ -0.87
SSPN-206ENST00000539019 NOS2P35228 1153 aa9.63□□□□□ -0.87
SSPN-206ENST00000539019 TXLNAP40222 546 aa9.63□□□□□ -0.87
SSPN-206ENST00000539019 MAP2K3P46734 347 aa9.63□□□□□ -0.87
SSPN-206ENST00000539019 MARSP56192 900 aaKnown RBP9.63□□□□□ -0.87
SSPN-206ENST00000539019 CTBSQ01459 385 aa9.63□□□□□ -0.87
SSPN-206ENST00000539019 L3MBTL2Q969R5 705 aa9.63□□□□□ -0.87
SSPN-206ENST00000539019 ZNF594Q96JF6 807 aaPredicted RBP9.63□□□□□ -0.87
SSPN-206ENST00000539019 ENAMQ9NRM1 1142 aa9.63□□□□□ -0.87
SSPN-206ENST00000539019 PCDHGC4Q9Y5F7 938 aa9.63□□□□□ -0.87
SSPN-206ENST00000539019 C2CD2LO14523 706 aa9.63□□□□□ -0.87
SSPN-206ENST00000539019 RASA1P20936 1047 aa9.63□□□□□ -0.87
SSPN-206ENST00000539019 FGFR3P22607 806 aa9.63□□□□□ -0.87
SSPN-206ENST00000539019 FIGNL1Q6PIW4 674 aa9.63□□□□□ -0.87
SSPN-206ENST00000539019 SIX5Q8N196 739 aa9.63□□□□□ -0.87
SSPN-206ENST00000539019 ZNF777Q9ULD5 760 aaPredicted RBP9.63□□□□□ -0.87
SSPN-206ENST00000539019 SFI1A8K8P3 1242 aa9.62□□□□□ -0.87
SSPN-206ENST00000539019 ATXN7O15265 892 aaPredicted RBP9.62□□□□□ -0.87
SSPN-206ENST00000539019 OXCT2Q9BYC2 517 aaPredicted RBP9.62□□□□□ -0.87
SSPN-206ENST00000539019 TSPAN10Q9H1Z9 355 aaPredicted RBP9.62□□□□□ -0.87
SSPN-206ENST00000539019 M0R2N6 131 aa9.61□□□□□ -0.87
SSPN-206ENST00000539019 SH3PXD2AQ5TCZ1 1133 aa9.61□□□□□ -0.87
SSPN-206ENST00000539019 BICDL1Q6ZP65 573 aa9.61□□□□□ -0.87
SSPN-206ENST00000539019 TSEN2Q8NCE0 465 aaKnown RBP9.61□□□□□ -0.87
SSPN-206ENST00000539019 ZNF232Q9UNY5 417 aa9.61□□□□□ -0.87
SSPN-206ENST00000539019 SERTM1A2A2V5 107 aa9.6□□□□□ -0.87
SSPN-206ENST00000539019 BMP4P12644 408 aa9.6□□□□□ -0.87
SSPN-206ENST00000539019 KANK4Q5T7N3 995 aaPredicted RBP9.6□□□□□ -0.87
SSPN-206ENST00000539019 HCN2Q9UL51 889 aa9.6□□□□□ -0.87
SSPN-206ENST00000539019 RBM19Q9Y4C8 960 aaKnown RBP9.6□□□□□ -0.87
SSPN-206ENST00000539019 EML1O00423 815 aa9.59□□□□□ -0.87
SSPN-206ENST00000539019 OIP5O43482 229 aa9.59□□□□□ -0.87
SSPN-206ENST00000539019 MAPTP10636 758 aaKnown RBP9.59□□□□□ -0.87
SSPN-206ENST00000539019 LMOD1P29536 600 aaPredicted RBP9.59□□□□□ -0.87
SSPN-206ENST00000539019 RASSF7Q02833 373 aa9.59□□□□□ -0.87
SSPN-206ENST00000539019 TNP2Q05952 138 aa9.59□□□□□ -0.87
SSPN-206ENST00000539019 C1orf229Q6ZS94 237 aaPredicted RBP9.59□□□□□ -0.87
SSPN-206ENST00000539019 NEDD1Q8NHV4 660 aa9.59□□□□□ -0.87
SSPN-206ENST00000539019 LRRC4BQ9NT99 713 aa9.59□□□□□ -0.87
SSPN-206ENST00000539019 GJA3Q9Y6H8 435 aa9.59□□□□□ -0.87
SSPN-206ENST00000539019 DCDC2BA2VCK2 349 aa9.58□□□□□ -0.88
SSPN-206ENST00000539019 RNF225M0QZC1 329 aaPredicted RBP9.58□□□□□ -0.88
SSPN-206ENST00000539019 KHNYNO15037 678 aaKnown RBP9.58□□□□□ -0.88
SSPN-206ENST00000539019 LARP1Q6PKG0 1096 aaKnown RBP9.58□□□□□ -0.88
SSPN-206ENST00000539019 C7orf43Q8WVR3 580 aa9.58□□□□□ -0.88
SSPN-206ENST00000539019 SCARF2Q96GP6 870 aaPredicted RBP9.58□□□□□ -0.88
SSPN-206ENST00000539019 IRS1P35568 1242 aa9.57□□□□□ -0.88
SSPN-206ENST00000539019 CRTC2Q53ET0 693 aaPredicted RBP9.57□□□□□ -0.88
SSPN-206ENST00000539019 GALNT6Q8NCL4 622 aa9.57□□□□□ -0.88
SSPN-206ENST00000539019 HCN4Q9Y3Q4 1203 aa9.57□□□□□ -0.88
SSPN-206ENST00000539019 CNTNAP5Q8WYK1 1306 aa9.57□□□□□ -0.88
SSPN-206ENST00000539019 GDF11O95390 407 aa9.56□□□□□ -0.88
SSPN-206ENST00000539019 SEC13P55735 322 aa9.56□□□□□ -0.88
SSPN-206ENST00000539019 PSMA6P60900 246 aaKnown RBP9.56□□□□□ -0.88
SSPN-206ENST00000539019 PTK7Q13308 1070 aa9.56□□□□□ -0.88
SSPN-206ENST00000539019 TMEM151AQ8N4L1 468 aa9.56□□□□□ -0.88
SSPN-206ENST00000539019 VRTNQ9H8Y1 702 aa9.56□□□□□ -0.88
SSPN-206ENST00000539019 GDF2Q9UK05 429 aaPredicted RBP9.56□□□□□ -0.88
SSPN-206ENST00000539019 SHISA8B8ZZ34 492 aa9.55□□□□□ -0.88
SSPN-206ENST00000539019 C21orf2O43822 256 aa9.55□□□□□ -0.88
SSPN-206ENST00000539019 CD33P20138 364 aa9.55□□□□□ -0.88
SSPN-206ENST00000539019 LRRC69Q6ZNQ3 347 aa9.55□□□□□ -0.88
SSPN-206ENST00000539019 GOLGA6L1Q8N7Z2 621 aa9.55□□□□□ -0.88
SSPN-206ENST00000539019 GGA1Q9UJY5 639 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms