RNA–Protein interactions for RNA: ENST00000538941.6

SCAPER-203, Transcript of S-phase cyclin A associated protein in the ER, humanhuman

TSL 1 (best) BASIC

Gene SCAPER, Length 4,853 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPER-203ENST00000538941 TPM1P09493 284 aa8.08□□□□□ -1.12
SCAPER-203ENST00000538941 ZNF165P49910 485 aa8.08□□□□□ -1.12
SCAPER-203ENST00000538941 C17orf53Q8N3J3 647 aaPredicted RBP8.08□□□□□ -1.12
SCAPER-203ENST00000538941 ACBD3Q9H3P7 528 aa8.08□□□□□ -1.12
SCAPER-203ENST00000538941 MADDQ8WXG6 1647 aa8.07□□□□□ -1.12
SCAPER-203ENST00000538941 CTAGE5O15320 804 aa8.07□□□□□ -1.12
SCAPER-203ENST00000538941 PTGS1P23219 599 aa8.07□□□□□ -1.12
SCAPER-203ENST00000538941 U2AF2P26368 475 aaKnown RBP eCLIP8.07□□□□□ -1.129e-7■■□□□ 14.5
SCAPER-203ENST00000538941 BRPF1P55201 1214 aaPredicted RBP8.07□□□□□ -1.12
SCAPER-203ENST00000538941 GABPB1Q06547 395 aaPredicted RBP8.07□□□□□ -1.12
SCAPER-203ENST00000538941 TEFQ10587 303 aa8.07□□□□□ -1.12
SCAPER-203ENST00000538941 PLEKHF1Q96S99 279 aa8.07□□□□□ -1.12
SCAPER-203ENST00000538941 FANCAO15360 1455 aa8.07□□□□□ -1.12
SCAPER-203ENST00000538941 BMS1Q14692 1282 aaKnown RBP8.07□□□□□ -1.12
SCAPER-203ENST00000538941 ZNF397Q8NF99 534 aaPredicted RBP8.07□□□□□ -1.12
SCAPER-203ENST00000538941 UBXN4Q92575 508 aa8.07□□□□□ -1.12
SCAPER-203ENST00000538941 NOL10Q9BSC4 688 aaKnown RBP8.07□□□□□ -1.12
SCAPER-203ENST00000538941 MSH6P52701 1360 aa8.07□□□□□ -1.12
SCAPER-203ENST00000538941 GADD45BO75293 160 aaPredicted RBP8.07□□□□□ -1.12
SCAPER-203ENST00000538941 DDIT3P35638 169 aa8.07□□□□□ -1.12
SCAPER-203ENST00000538941 GSDMDP57764 484 aa8.07□□□□□ -1.12
SCAPER-203ENST00000538941 ANO6Q4KMQ2 910 aa8.07□□□□□ -1.12
SCAPER-203ENST00000538941 HDGFL1Q5TGJ6 251 aa8.07□□□□□ -1.12
SCAPER-203ENST00000538941 LEKR1Q6ZMV7 388 aa8.07□□□□□ -1.12
SCAPER-203ENST00000538941 CHMLP26374 656 aa8.07□□□□□ -1.12
SCAPER-203ENST00000538941 DNM1Q05193 864 aaKnown RBP8.07□□□□□ -1.12
SCAPER-203ENST00000538941 HSP90B2PQ58FF3 399 aa8.07□□□□□ -1.12
SCAPER-203ENST00000538941 SYNE3Q6ZMZ3 975 aa8.07□□□□□ -1.12
SCAPER-203ENST00000538941 LARP6Q9BRS8 491 aaKnown RBP8.07□□□□□ -1.12
SCAPER-203ENST00000538941 ANO10Q9NW15 660 aa8.07□□□□□ -1.12
SCAPER-203ENST00000538941 HOOK1Q9UJC3 728 aaKnown RBP8.07□□□□□ -1.12
SCAPER-203ENST00000538941 LRRFIP2Q9Y608 721 aaKnown RBP8.07□□□□□ -1.12
SCAPER-203ENST00000538941 TYRO3Q06418 890 aa8.06□□□□□ -1.12
SCAPER-203ENST00000538941 OLFM4Q6UX06 510 aa8.06□□□□□ -1.12
SCAPER-203ENST00000538941 MYO5CQ9NQX4 1742 aa8.06□□□□□ -1.12
SCAPER-203ENST00000538941 DDX58O95786 925 aaKnown RBP8.06□□□□□ -1.12
SCAPER-203ENST00000538941 ME1P48163 572 aa8.06□□□□□ -1.12
SCAPER-203ENST00000538941 KRT32Q14532 448 aa8.06□□□□□ -1.12
SCAPER-203ENST00000538941 NME9Q86XW9 330 aa8.06□□□□□ -1.12
SCAPER-203ENST00000538941 TSC1Q92574 1164 aa8.06□□□□□ -1.12
SCAPER-203ENST00000538941 CPLX1O14810 134 aa8.06□□□□□ -1.12
SCAPER-203ENST00000538941 NEXNQ0ZGT2 675 aa8.06□□□□□ -1.12
SCAPER-203ENST00000538941 STX1AQ16623 288 aa8.06□□□□□ -1.12
SCAPER-203ENST00000538941 PHACTR3Q96KR7 559 aa8.06□□□□□ -1.12
SCAPER-203ENST00000538941 SFPQP23246 707 aaKnown RBP eCLIP8.06□□□□□ -1.12
SCAPER-203ENST00000538941 FMNL2Q96PY5 1086 aa8.06□□□□□ -1.12
SCAPER-203ENST00000538941 POLKQ9UBT6 870 aa8.06□□□□□ -1.12
SCAPER-203ENST00000538941 CCDC9Q9Y3X0 531 aaKnown RBP8.06□□□□□ -1.12
SCAPER-203ENST00000538941 CBFA2T2O43439 604 aa8.05□□□□□ -1.12
SCAPER-203ENST00000538941 IGSF3O75054 1194 aa8.05□□□□□ -1.12
SCAPER-203ENST00000538941 AK2P54819 239 aa8.05□□□□□ -1.12
SCAPER-203ENST00000538941 SETQ01105 290 aaPredicted RBP8.05□□□□□ -1.12
SCAPER-203ENST00000538941 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.05□□□□□ -1.12
SCAPER-203ENST00000538941 TRMT1Q9NXH9 659 aaKnown RBP8.05□□□□□ -1.12
SCAPER-203ENST00000538941 MIS18AQ9NYP9 233 aa8.05□□□□□ -1.12
SCAPER-203ENST00000538941 SYT1P21579 422 aa8.05□□□□□ -1.12
SCAPER-203ENST00000538941 IRX3P78415 501 aaPredicted RBP8.05□□□□□ -1.12
SCAPER-203ENST00000538941 SPG7Q9UQ90 795 aa8.05□□□□□ -1.12
SCAPER-203ENST00000538941 SHROOM2Q13796 1616 aa8.05□□□□□ -1.12
SCAPER-203ENST00000538941 FLIIQ13045 1269 aa8.05□□□□□ -1.12
SCAPER-203ENST00000538941 SNW1Q13573 536 aaKnown RBP8.05□□□□□ -1.12
SCAPER-203ENST00000538941 STK38Q15208 465 aa8.05□□□□□ -1.12
SCAPER-203ENST00000538941 KIF2CQ99661 725 aa8.05□□□□□ -1.12
SCAPER-203ENST00000538941 RIMS2Q9UQ26 1411 aa8.05□□□□□ -1.12
SCAPER-203ENST00000538941 SSH2Q76I76 1423 aa8.05□□□□□ -1.12
SCAPER-203ENST00000538941 DNAJC2Q99543 621 aaKnown RBP8.04□□□□□ -1.12
SCAPER-203ENST00000538941 ATP8B2P98198 1209 aa8.04□□□□□ -1.12
SCAPER-203ENST00000538941 LRRFIP1Q32MZ4 808 aaKnown RBP8.04□□□□□ -1.12
SCAPER-203ENST00000538941 CPLX2Q6PUV4 134 aaKnown RBP8.04□□□□□ -1.12
SCAPER-203ENST00000538941 AACSQ86V21 672 aa8.04□□□□□ -1.12
SCAPER-203ENST00000538941 PDILTQ8N807 584 aa8.04□□□□□ -1.12
SCAPER-203ENST00000538941 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.04□□□□□ -1.12
SCAPER-203ENST00000538941 SLU7O95391 586 aaKnown RBP8.04□□□□□ -1.12
SCAPER-203ENST00000538941 SERPINC1P01008 464 aa8.04□□□□□ -1.12
SCAPER-203ENST00000538941 SKILP12757 684 aa8.04□□□□□ -1.12
SCAPER-203ENST00000538941 DACT1Q9NYF0 836 aa8.04□□□□□ -1.12
SCAPER-203ENST00000538941 CFAP74Q9C0B2 1584 aa8.04□□□□□ -1.12
SCAPER-203ENST00000538941 EPB41L2O43491 1005 aaKnown RBP8.04□□□□□ -1.12
SCAPER-203ENST00000538941 C1orf141Q5JVX7 400 aa8.04□□□□□ -1.12
SCAPER-203ENST00000538941 CD109Q6YHK3 1445 aa8.04□□□□□ -1.12
SCAPER-203ENST00000538941 TRIM29Q14134 588 aa8.03□□□□□ -1.12
SCAPER-203ENST00000538941 ERCC4Q92889 916 aaPredicted RBP8.03□□□□□ -1.12
SCAPER-203ENST00000538941 TFIP11Q9UBB9 837 aaKnown RBP8.03□□□□□ -1.12
SCAPER-203ENST00000538941 RGS12O14924 1447 aa8.03□□□□□ -1.12
SCAPER-203ENST00000538941 IQSEC2Q5JU85 1478 aa8.03□□□□□ -1.12
SCAPER-203ENST00000538941 VIRMAQ69YN4 1812 aaKnown RBP8.03□□□□□ -1.12
SCAPER-203ENST00000538941 EIF3JO75822 258 aaKnown RBP8.03□□□□□ -1.12
SCAPER-203ENST00000538941 LUZP1Q86V48 1076 aa8.03□□□□□ -1.12
SCAPER-203ENST00000538941 CCDC150Q8NCX0 1101 aa8.03□□□□□ -1.12
SCAPER-203ENST00000538941 CHAMP1Q96JM3 812 aa8.03□□□□□ -1.12
SCAPER-203ENST00000538941 PTCH1Q13635 1447 aa8.03□□□□□ -1.12
SCAPER-203ENST00000538941 POGZQ7Z3K3 1410 aa8.03□□□□□ -1.12
SCAPER-203ENST00000538941 REREQ9P2R6 1566 aa8.03□□□□□ -1.12
SCAPER-203ENST00000538941 FBLN1P23142 703 aa8.03□□□□□ -1.12
SCAPER-203ENST00000538941 NUDT16Q96DE0 195 aaKnown RBP8.03□□□□□ -1.12
SCAPER-203ENST00000538941 ATP7AQ04656 1500 aa8.03□□□□□ -1.12
SCAPER-203ENST00000538941 GTF2F1P35269 517 aaKnown RBP eCLIP8.03□□□□□ -1.12
SCAPER-203ENST00000538941 LMOD2Q6P5Q4 547 aa8.03□□□□□ -1.12
SCAPER-203ENST00000538941 DNAJC25Q9H1X3 360 aa8.03□□□□□ -1.12
SCAPER-203ENST00000538941 CCDC61Q9Y6R9 512 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 90.8 ms