RNA–Protein interactions for RNA: ENST00000538838.5

TMEM260-202, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best) BASIC

Gene TMEM260, Length 1,638 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-202ENST00000538838 CYP19A1P11511 503 aaPredicted RBP30.23■■■□□ 2.43
TMEM260-202ENST00000538838 LINC00116Q8NCU8 138 aa30.23■■■□□ 2.43
TMEM260-202ENST00000538838 BAG6P46379 1132 aa30.22■■■□□ 2.43
TMEM260-202ENST00000538838 SLC27A3Q5K4L6 730 aa30.22■■■□□ 2.43
TMEM260-202ENST00000538838 DEFB132Q7Z7B7 95 aa30.22■■■□□ 2.43
TMEM260-202ENST00000538838 CCDC125Q86Z20 511 aa30.22■■■□□ 2.43
TMEM260-202ENST00000538838 NUP188Q5SRE5 1749 aa30.22■■■□□ 2.43
TMEM260-202ENST00000538838 STARD3NLO95772 234 aa30.22■■■□□ 2.43
TMEM260-202ENST00000538838 CCDC30Q5VVM6 783 aa30.22■■■□□ 2.43
TMEM260-202ENST00000538838 BCL2L13Q9BXK5 485 aa30.22■■■□□ 2.43
TMEM260-202ENST00000538838 CENPBP07199 599 aaPredicted RBP30.21■■■□□ 2.43
TMEM260-202ENST00000538838 RARSP54136 660 aaKnown RBP30.21■■■□□ 2.43
TMEM260-202ENST00000538838 UPF1Q92900 1129 aaKnown RBP eCLIP30.21■■■□□ 2.43
TMEM260-202ENST00000538838 ZNF428Q96B54 188 aa30.21■■■□□ 2.43
TMEM260-202ENST00000538838 RCAN3Q9UKA8 241 aa30.21■■■□□ 2.43
TMEM260-202ENST00000538838 PIP4K2AP48426 406 aaPredicted RBP30.2■■■□□ 2.43
TMEM260-202ENST00000538838 EZH2Q15910 746 aaKnown RBP30.2■■■□□ 2.43
TMEM260-202ENST00000538838 SSH1Q8WYL5 1049 aa30.2■■■□□ 2.43
TMEM260-202ENST00000538838 CAMKK2Q96RR4 588 aa30.2■■■□□ 2.43
TMEM260-202ENST00000538838 CHPF2Q9P2E5 772 aa30.2■■■□□ 2.43
TMEM260-202ENST00000538838 A1BGP04217 495 aa30.19■■■□□ 2.42
TMEM260-202ENST00000538838 CRKLP46109 303 aaKnown RBP30.18■■■□□ 2.42
TMEM260-202ENST00000538838 SMC4Q9NTJ3 1288 aa30.18■■■□□ 2.42
TMEM260-202ENST00000538838 ANXA1P04083 346 aa30.17■■■□□ 2.42
TMEM260-202ENST00000538838 PROSER3Q2NL68 480 aa30.17■■■□□ 2.42
TMEM260-202ENST00000538838 ALDH1L2Q3SY69 923 aa30.17■■■□□ 2.42
TMEM260-202ENST00000538838 STK31Q9BXU1 1019 aa30.17■■■□□ 2.42
TMEM260-202ENST00000538838 PDIA6Q15084 440 aa30.16■■■□□ 2.42
TMEM260-202ENST00000538838 CHMP4AQ9BY43 222 aa30.16■■■□□ 2.42
TMEM260-202ENST00000538838 ZBTB1Q9Y2K1 713 aa30.16■■■□□ 2.42
TMEM260-202ENST00000538838 ERBB4Q15303 1308 aa30.16■■■□□ 2.42
TMEM260-202ENST00000538838 CNTNAP4Q9C0A0 1308 aa30.16■■■□□ 2.42
TMEM260-202ENST00000538838 NBPF26B4DH59 902 aa30.15■■■□□ 2.42
TMEM260-202ENST00000538838 BCAR3O75815 825 aa30.15■■■□□ 2.42
TMEM260-202ENST00000538838 NBPF14Q5TI25 921 aa30.15■■■□□ 2.42
TMEM260-202ENST00000538838 NBPF10Q6P3W6 841 aaKnown RBP30.15■■■□□ 2.42
TMEM260-202ENST00000538838 NBPF15Q8N660 670 aa30.15■■■□□ 2.42
TMEM260-202ENST00000538838 CCDC87Q9NVE4 849 aa30.15■■■□□ 2.42
TMEM260-202ENST00000538838 DBF4Q9UBU7 674 aaPredicted RBP30.15■■■□□ 2.42
TMEM260-202ENST00000538838 MYL6BP14649 208 aa30.14■■■□□ 2.42
TMEM260-202ENST00000538838 INTS5Q6P9B9 1019 aaKnown RBP30.14■■■□□ 2.42
TMEM260-202ENST00000538838 UBR3Q6ZT12 1888 aa30.14■■■□□ 2.42
TMEM260-202ENST00000538838 TUBGCP6Q96RT7 1819 aa30.14■■■□□ 2.42
TMEM260-202ENST00000538838 DDX21Q9NR30 783 aaKnown RBP eCLIP30.14■■■□□ 2.41
TMEM260-202ENST00000538838 SLC4A2P04920 1241 aa30.13■■■□□ 2.41
TMEM260-202ENST00000538838 MRPL50Q8N5N7 158 aaKnown RBP30.13■■■□□ 2.41
TMEM260-202ENST00000538838 CANXP27824 592 aaKnown RBP30.12■■■□□ 2.41
TMEM260-202ENST00000538838 G2E3Q7L622 706 aa30.1■■■□□ 2.41
TMEM260-202ENST00000538838 LRP10Q7Z4F1 713 aa30.1■■■□□ 2.41
TMEM260-202ENST00000538838 RC3H1Q5TC82 1133 aaKnown RBP30.09■■■□□ 2.41
TMEM260-202ENST00000538838 PHAXQ9H814 394 aaKnown RBP30.09■■■□□ 2.41
TMEM260-202ENST00000538838 HYPKQ9NX55 129 aa30.08■■■□□ 2.41
TMEM260-202ENST00000538838 ZNF330Q9Y3S2 320 aaPredicted RBP30.08■■■□□ 2.41
TMEM260-202ENST00000538838 C4AP0C0L4 1744 aa30.08■■■□□ 2.41
TMEM260-202ENST00000538838 GNPATO15228 680 aa30.07■■■□□ 2.4
TMEM260-202ENST00000538838 AK7Q96M32 723 aa30.07■■■□□ 2.4
TMEM260-202ENST00000538838 BRPF1P55201 1214 aaPredicted RBP30.06■■■□□ 2.4
TMEM260-202ENST00000538838 ZNF827Q17R98 1081 aa30.06■■■□□ 2.4
TMEM260-202ENST00000538838 IL6STP40189 918 aaPredicted RBP30.05■■■□□ 2.4
TMEM260-202ENST00000538838 KIF16BQ96L93 1317 aa30.05■■■□□ 2.4
TMEM260-202ENST00000538838 ARFGEF2Q9Y6D5 1785 aa30.05■■■□□ 2.4
TMEM260-202ENST00000538838 FLIIQ13045 1269 aa30.04■■■□□ 2.4
TMEM260-202ENST00000538838 SMIM5Q71RC9 77 aa30.04■■■□□ 2.4
TMEM260-202ENST00000538838 AMIGO3Q86WK7 504 aa30.04■■■□□ 2.4
TMEM260-202ENST00000538838 COL15A1P39059 1388 aa30.04■■■□□ 2.4
TMEM260-202ENST00000538838 EIF5P55010 431 aaKnown RBP30.04■■■□□ 2.4
TMEM260-202ENST00000538838 AIMP1Q12904 312 aaKnown RBP30.04■■■□□ 2.4
TMEM260-202ENST00000538838 XAGE3Q8WTP9 111 aa30.04■■■□□ 2.4
TMEM260-202ENST00000538838 FRAT1Q92837 279 aaPredicted RBP30.04■■■□□ 2.4
TMEM260-202ENST00000538838 NOB1Q9ULX3 412 aaKnown RBP30.04■■■□□ 2.4
TMEM260-202ENST00000538838 BCORQ6W2J9 1755 aa30.03■■■□□ 2.4
TMEM260-202ENST00000538838 RPS6KA4O75676 772 aa30.03■■■□□ 2.4
TMEM260-202ENST00000538838 HMGB2P26583 209 aaKnown RBP30.03■■■□□ 2.4
TMEM260-202ENST00000538838 AKT1S1Q96B36 256 aa30.03■■■□□ 2.4
TMEM260-202ENST00000538838 ANO8Q9HCE9 1232 aaPredicted RBP30.03■■■□□ 2.4
TMEM260-202ENST00000538838 QSER1Q2KHR3 1735 aa30.02■■■□□ 2.4
TMEM260-202ENST00000538838 COPS6Q7L5N1 327 aa30.02■■■□□ 2.4
TMEM260-202ENST00000538838 SCN7AQ01118 1682 aa30.01■■■□□ 2.39
TMEM260-202ENST00000538838 RTCBQ9Y3I0 505 aaKnown RBP30.01■■■□□ 2.39
TMEM260-202ENST00000538838 PHF14O94880 888 aa30■■■□□ 2.39
TMEM260-202ENST00000538838 FKBP5Q13451 457 aaPredicted RBP30■■■□□ 2.39
TMEM260-202ENST00000538838 TTLL7Q6ZT98 887 aa30■■■□□ 2.39
TMEM260-202ENST00000538838 SUPT16HQ9Y5B9 1047 aaKnown RBP30■■■□□ 2.39
TMEM260-202ENST00000538838 PTPRCP08575 1304 aa29.98■■■□□ 2.39
TMEM260-202ENST00000538838 PLIN1O60240 522 aa29.98■■■□□ 2.39
TMEM260-202ENST00000538838 NPM2Q86SE8 214 aaKnown RBP29.98■■■□□ 2.39
TMEM260-202ENST00000538838 RRP1P56182 461 aaKnown RBP29.96■■■□□ 2.39
TMEM260-202ENST00000538838 DZIP3Q86Y13 1208 aaKnown RBP29.96■■■□□ 2.39
TMEM260-202ENST00000538838 ARXQ96QS3 562 aa29.96■■■□□ 2.39
TMEM260-202ENST00000538838 TFCP2L1Q9NZI6 479 aa29.96■■■□□ 2.39
TMEM260-202ENST00000538838 TNNQ9UQP3 1299 aa29.96■■■□□ 2.39
TMEM260-202ENST00000538838 NUP98P52948 1817 aa29.96■■■□□ 2.39
TMEM260-202ENST00000538838 N4BP2Q86UW6 1770 aaPredicted RBP29.96■■■□□ 2.39
TMEM260-202ENST00000538838 ADCY9O60503 1353 aa29.96■■■□□ 2.39
TMEM260-202ENST00000538838 STK32BQ9NY57 414 aa29.96■■■□□ 2.39
TMEM260-202ENST00000538838 TBC1D2BQ9UPU7 963 aa29.96■■■□□ 2.39
TMEM260-202ENST00000538838 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP29.95■■■□□ 2.38
TMEM260-202ENST00000538838 ZKSCAN2Q63HK3 967 aa29.95■■■□□ 2.38
TMEM260-202ENST00000538838 ANKRD36CQ5JPF3 1778 aa29.94■■■□□ 2.38
TMEM260-202ENST00000538838 SSFA2P28290 1259 aa29.94■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms