RNA–Protein interactions for RNA: ENST00000538696.5

CLN6-202, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-202ENST00000538696 LRRC4BQ9NT99 713 aa22.23■■□□□ 1.15
CLN6-202ENST00000538696 FKBP8Q14318 412 aa22.22■■□□□ 1.15
CLN6-202ENST00000538696 TUBGCP6Q96RT7 1819 aa22.22■■□□□ 1.15
CLN6-202ENST00000538696 ELL2O00472 640 aaPredicted RBP22.21■■□□□ 1.15
CLN6-202ENST00000538696 LINC00116Q8NCU8 138 aa22.21■■□□□ 1.15
CLN6-202ENST00000538696 HOXB7P09629 217 aa22.2■■□□□ 1.14
CLN6-202ENST00000538696 IRX6P78412 446 aaPredicted RBP22.2■■□□□ 1.14
CLN6-202ENST00000538696 TWISTNBQ3B726 338 aaPredicted RBP22.2■■□□□ 1.14
CLN6-202ENST00000538696 USP16Q9Y5T5 823 aa22.2■■□□□ 1.14
CLN6-202ENST00000538696 UBR3Q6ZT12 1888 aa22.2■■□□□ 1.14
CLN6-202ENST00000538696 SOS1Q07889 1333 aaPredicted RBP22.19■■□□□ 1.14
CLN6-202ENST00000538696 CACNA1FO60840 1977 aa22.18■■□□□ 1.14
CLN6-202ENST00000538696 CYP19A1P11511 503 aaPredicted RBP22.18■■□□□ 1.14
CLN6-202ENST00000538696 VAMP4O75379 141 aa22.17■■□□□ 1.14
CLN6-202ENST00000538696 TEX13AQ9BXU3 409 aaPredicted RBP22.17■■□□□ 1.14
CLN6-202ENST00000538696 RRP1P56182 461 aaKnown RBP22.16■■□□□ 1.14
CLN6-202ENST00000538696 CNTNAP4Q9C0A0 1308 aa22.16■■□□□ 1.14
CLN6-202ENST00000538696 QSER1Q2KHR3 1735 aa22.16■■□□□ 1.14
CLN6-202ENST00000538696 EIF2S2P20042 333 aaKnown RBP22.15■■□□□ 1.14
CLN6-202ENST00000538696 HDGFL1Q5TGJ6 251 aa22.15■■□□□ 1.14
CLN6-202ENST00000538696 NECTIN2Q92692 538 aa22.15■■□□□ 1.14
CLN6-202ENST00000538696 STARD3NLO95772 234 aa22.14■■□□□ 1.14
CLN6-202ENST00000538696 CRKLP46109 303 aaKnown RBP22.14■■□□□ 1.14
CLN6-202ENST00000538696 INTS5Q6P9B9 1019 aaKnown RBP22.13■■□□□ 1.13
CLN6-202ENST00000538696 C4AP0C0L4 1744 aa22.13■■□□□ 1.13
CLN6-202ENST00000538696 A1BGP04217 495 aa22.12■■□□□ 1.13
CLN6-202ENST00000538696 CT47B1P0C2W7 299 aaPredicted RBP22.12■■□□□ 1.13
CLN6-202ENST00000538696 CCDC87Q9NVE4 849 aa22.12■■□□□ 1.13
CLN6-202ENST00000538696 ZBTB1Q9Y2K1 713 aa22.12■■□□□ 1.13
CLN6-202ENST00000538696 PIP4K2AP48426 406 aaPredicted RBP22.11■■□□□ 1.13
CLN6-202ENST00000538696 ZNF827Q17R98 1081 aa22.11■■□□□ 1.13
CLN6-202ENST00000538696 ERBB4Q15303 1308 aa22.11■■□□□ 1.13
CLN6-202ENST00000538696 NBPF26B4DH59 902 aa22.1■■□□□ 1.13
CLN6-202ENST00000538696 PDIA6Q15084 440 aa22.1■■□□□ 1.13
CLN6-202ENST00000538696 RC3H1Q5TC82 1133 aaKnown RBP22.1■■□□□ 1.13
CLN6-202ENST00000538696 NBPF14Q5TI25 921 aa22.1■■□□□ 1.13
CLN6-202ENST00000538696 NBPF10Q6P3W6 841 aaKnown RBP22.1■■□□□ 1.13
CLN6-202ENST00000538696 NBPF15Q8N660 670 aa22.1■■□□□ 1.13
CLN6-202ENST00000538696 AKT1S1Q96B36 256 aa22.1■■□□□ 1.13
CLN6-202ENST00000538696 ANO8Q9HCE9 1232 aaPredicted RBP22.1■■□□□ 1.13
CLN6-202ENST00000538696 CHPF2Q9P2E5 772 aa22.1■■□□□ 1.13
CLN6-202ENST00000538696 TCERG1O14776 1098 aaKnown RBP22.09■■□□□ 1.13
CLN6-202ENST00000538696 PROSER3Q2NL68 480 aa22.09■■□□□ 1.13
CLN6-202ENST00000538696 CCDC30Q5VVM6 783 aa22.09■■□□□ 1.13
CLN6-202ENST00000538696 ANXA1P04083 346 aa22.08■■□□□ 1.13
CLN6-202ENST00000538696 CANXP27824 592 aaKnown RBP22.08■■□□□ 1.13
CLN6-202ENST00000538696 BCORQ6W2J9 1755 aa22.08■■□□□ 1.13
CLN6-202ENST00000538696 AK7Q96M32 723 aa22.08■■□□□ 1.13
CLN6-202ENST00000538696 GNPATO15228 680 aa22.07■■□□□ 1.12
CLN6-202ENST00000538696 HMGB2P26583 209 aaKnown RBP22.07■■□□□ 1.12
CLN6-202ENST00000538696 AMIGO3Q86WK7 504 aa22.07■■□□□ 1.12
CLN6-202ENST00000538696 DDX21Q9NR30 783 aaKnown RBP eCLIP22.07■■□□□ 1.12
CLN6-202ENST00000538696 LRP10Q7Z4F1 713 aa22.06■■□□□ 1.12
CLN6-202ENST00000538696 ZNF428Q96B54 188 aa22.06■■□□□ 1.12
CLN6-202ENST00000538696 CHMP4AQ9BY43 222 aa22.06■■□□□ 1.12
CLN6-202ENST00000538696 DBF4Q9UBU7 674 aaPredicted RBP22.06■■□□□ 1.12
CLN6-202ENST00000538696 SCN7AQ01118 1682 aa22.06■■□□□ 1.12
CLN6-202ENST00000538696 PLIN1O60240 522 aa22.06■■□□□ 1.12
CLN6-202ENST00000538696 MYL6BP14649 208 aa22.06■■□□□ 1.12
CLN6-202ENST00000538696 RARSP54136 660 aaKnown RBP22.06■■□□□ 1.12
CLN6-202ENST00000538696 SSH1Q8WYL5 1049 aa22.06■■□□□ 1.12
CLN6-202ENST00000538696 STK31Q9BXU1 1019 aa22.06■■□□□ 1.12
CLN6-202ENST00000538696 COL15A1P39059 1388 aa22.05■■□□□ 1.12
CLN6-202ENST00000538696 SOCS7O14512 581 aa22.05■■□□□ 1.12
CLN6-202ENST00000538696 RPS6KA4O75676 772 aa22.05■■□□□ 1.12
CLN6-202ENST00000538696 BCAR3O75815 825 aa22.05■■□□□ 1.12
CLN6-202ENST00000538696 IL6STP40189 918 aaPredicted RBP22.05■■□□□ 1.12
CLN6-202ENST00000538696 EIF5P55010 431 aaKnown RBP22.05■■□□□ 1.12
CLN6-202ENST00000538696 ALDH1L2Q3SY69 923 aa22.05■■□□□ 1.12
CLN6-202ENST00000538696 SMIM5Q71RC9 77 aa22.05■■□□□ 1.12
CLN6-202ENST00000538696 BCL2L13Q9BXK5 485 aa22.05■■□□□ 1.12
CLN6-202ENST00000538696 STK32BQ9NY57 414 aa22.05■■□□□ 1.12
CLN6-202ENST00000538696 SLC15A2Q16348 729 aa22.04■■□□□ 1.12
CLN6-202ENST00000538696 MRPL50Q8N5N7 158 aaKnown RBP22.04■■□□□ 1.12
CLN6-202ENST00000538696 ARFGEF2Q9Y6D5 1785 aa22.04■■□□□ 1.12
CLN6-202ENST00000538696 SMC4Q9NTJ3 1288 aa22.03■■□□□ 1.12
CLN6-202ENST00000538696 RTCBQ9Y3I0 505 aaKnown RBP22.03■■□□□ 1.12
CLN6-202ENST00000538696 ZNF330Q9Y3S2 320 aaPredicted RBP22.03■■□□□ 1.12
CLN6-202ENST00000538696 PHF14O94880 888 aa22.02■■□□□ 1.12
CLN6-202ENST00000538696 SLC4A2P04920 1241 aa22.02■■□□□ 1.12
CLN6-202ENST00000538696 PHAXQ9H814 394 aaKnown RBP22.02■■□□□ 1.12
CLN6-202ENST00000538696 HYPKQ9NX55 129 aa22.02■■□□□ 1.12
CLN6-202ENST00000538696 CASZ1Q86V15 1759 aa22.01■■□□□ 1.11
CLN6-202ENST00000538696 ERICH6BQ5W0A0 696 aa22.01■■□□□ 1.11
CLN6-202ENST00000538696 G2E3Q7L622 706 aa22.01■■□□□ 1.11
CLN6-202ENST00000538696 TFCP2L1Q9NZI6 479 aa22.01■■□□□ 1.11
CLN6-202ENST00000538696 NUP98P52948 1817 aa22■■□□□ 1.11
CLN6-202ENST00000538696 PNPLA7Q6ZV29 1317 aa22■■□□□ 1.11
CLN6-202ENST00000538696 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22■■□□□ 1.11
CLN6-202ENST00000538696 SSFA2P28290 1259 aa22■■□□□ 1.11
CLN6-202ENST00000538696 XAGE3Q8WTP9 111 aa22■■□□□ 1.11
CLN6-202ENST00000538696 ANKRD36CQ5JPF3 1778 aa21.99■■□□□ 1.11
CLN6-202ENST00000538696 ADRA2BP18089 450 aa21.99■■□□□ 1.11
CLN6-202ENST00000538696 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.99■■□□□ 1.11
CLN6-202ENST00000538696 TTLL7Q6ZT98 887 aa21.98■■□□□ 1.11
CLN6-202ENST00000538696 COPS6Q7L5N1 327 aa21.98■■□□□ 1.11
CLN6-202ENST00000538696 A0A087WZG4 1122 aa21.97■■□□□ 1.11
CLN6-202ENST00000538696 BRPF1P55201 1214 aaPredicted RBP21.97■■□□□ 1.11
CLN6-202ENST00000538696 AIMP1Q12904 312 aaKnown RBP21.97■■□□□ 1.11
CLN6-202ENST00000538696 FLIIQ13045 1269 aa21.97■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms