RNA–Protein interactions for RNA: ENST00000538492.5

RAB40C-204, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB40C, Length 2,569 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-204ENST00000538492 DBF4Q9UBU7 674 aaPredicted RBP30.48■■■□□ 2.47
RAB40C-204ENST00000538492 NCAPD2Q15021 1401 aa30.48■■■□□ 2.47
RAB40C-204ENST00000538492 RGPD5Q99666 1765 aa30.47■■■□□ 2.47
RAB40C-204ENST00000538492 PROSER3Q2NL68 480 aa30.47■■■□□ 2.47
RAB40C-204ENST00000538492 FSD2A1L4K1 749 aa30.47■■■□□ 2.47
RAB40C-204ENST00000538492 GIGYF1O75420 1035 aaPredicted RBP30.46■■■□□ 2.47
RAB40C-204ENST00000538492 RHPN1Q8TCX5 695 aa30.46■■■□□ 2.47
RAB40C-204ENST00000538492 C1orf167Q5SNV9 1468 aa30.45■■■□□ 2.47
RAB40C-204ENST00000538492 ANO2Q9NQ90 1003 aa30.45■■■□□ 2.47
RAB40C-204ENST00000538492 RAB11FIP3O75154 756 aa30.45■■■□□ 2.46
RAB40C-204ENST00000538492 XRCC6P12956 609 aaKnown RBP eCLIP30.44■■■□□ 2.46
RAB40C-204ENST00000538492 MAP4K4O95819 1239 aaPredicted RBP30.44■■■□□ 2.46
RAB40C-204ENST00000538492 C19orf44Q9H6X5 657 aa30.44■■■□□ 2.46
RAB40C-204ENST00000538492 MAP3K2Q9Y2U5 619 aa30.44■■■□□ 2.46
RAB40C-204ENST00000538492 ZGPATQ8N5A5 531 aaKnown RBP30.43■■■□□ 2.46
RAB40C-204ENST00000538492 NEK4P51957 841 aa30.42■■■□□ 2.46
RAB40C-204ENST00000538492 PKP1Q13835 747 aa30.42■■■□□ 2.46
RAB40C-204ENST00000538492 DDX17Q92841 729 aaKnown RBP30.42■■■□□ 2.46
RAB40C-204ENST00000538492 ERBB3P21860 1342 aa30.42■■■□□ 2.46
RAB40C-204ENST00000538492 PALD1Q9ULE6 856 aa30.42■■■□□ 2.46
RAB40C-204ENST00000538492 KIF1BPQ96EK5 621 aa30.4■■■□□ 2.46
RAB40C-204ENST00000538492 AOX1Q06278 1338 aa30.4■■■□□ 2.46
RAB40C-204ENST00000538492 BAG4O95429 457 aaKnown RBP30.39■■■□□ 2.46
RAB40C-204ENST00000538492 IL25Q9H293 177 aa30.39■■■□□ 2.46
RAB40C-204ENST00000538492 C9orf78Q9NZ63 289 aaPredicted RBP30.39■■■□□ 2.46
RAB40C-204ENST00000538492 CAMTA1Q9Y6Y1 1673 aa30.39■■■□□ 2.45
RAB40C-204ENST00000538492 OVOS2A0A0G2JMS6 1433 aa30.38■■■□□ 2.45
RAB40C-204ENST00000538492 CWF19L2Q2TBE0 894 aaKnown RBP30.38■■■□□ 2.45
RAB40C-204ENST00000538492 PANK2Q9BZ23 570 aa30.38■■■□□ 2.45
RAB40C-204ENST00000538492 MCCP23508 829 aa30.38■■■□□ 2.45
RAB40C-204ENST00000538492 PI4K2BQ8TCG2 481 aa30.38■■■□□ 2.45
RAB40C-204ENST00000538492 NLRP2Q9NX02 1062 aa30.38■■■□□ 2.45
RAB40C-204ENST00000538492 HEG1Q9ULI3 1381 aa30.38■■■□□ 2.45
RAB40C-204ENST00000538492 NUCB2P80303 420 aa30.37■■■□□ 2.45
RAB40C-204ENST00000538492 SKOR2Q2VWA4 1001 aaPredicted RBP30.37■■■□□ 2.45
RAB40C-204ENST00000538492 KIF1AQ12756 1690 aa30.37■■■□□ 2.45
RAB40C-204ENST00000538492 GOLGA6L22H0YM25 854 aa30.37■■■□□ 2.45
RAB40C-204ENST00000538492 KSR2Q6VAB6 950 aa30.37■■■□□ 2.45
RAB40C-204ENST00000538492 OS9Q13438 667 aaPredicted RBP30.36■■■□□ 2.45
RAB40C-204ENST00000538492 CLEC17AQ6ZS10 378 aa30.36■■■□□ 2.45
RAB40C-204ENST00000538492 PTMSP20962 102 aa30.35■■■□□ 2.45
RAB40C-204ENST00000538492 SLC39A6Q13433 755 aa30.35■■■□□ 2.45
RAB40C-204ENST00000538492 CWC22Q9HCG8 908 aaKnown RBP30.35■■■□□ 2.45
RAB40C-204ENST00000538492 AIMP1Q12904 312 aaKnown RBP30.35■■■□□ 2.45
RAB40C-204ENST00000538492 RAPGEF4Q8WZA2 1011 aa30.35■■■□□ 2.45
RAB40C-204ENST00000538492 SIPA1L3O60292 1781 aaPredicted RBP30.35■■■□□ 2.45
RAB40C-204ENST00000538492 CYP2E1P05181 493 aaPredicted RBP30.34■■■□□ 2.45
RAB40C-204ENST00000538492 ATF3P18847 181 aa30.34■■■□□ 2.45
RAB40C-204ENST00000538492 NOL8Q76FK4 1167 aaKnown RBP30.33■■■□□ 2.45
RAB40C-204ENST00000538492 ALS2Q96Q42 1657 aa30.33■■■□□ 2.45
RAB40C-204ENST00000538492 MCTP1Q6DN14 999 aa30.32■■■□□ 2.44
RAB40C-204ENST00000538492 TMX3Q96JJ7 454 aa30.32■■■□□ 2.44
RAB40C-204ENST00000538492 HYPKQ9NX55 129 aa30.32■■■□□ 2.44
RAB40C-204ENST00000538492 ALDH1L1O75891 902 aa30.32■■■□□ 2.44
RAB40C-204ENST00000538492 HSP90AB4PQ58FF6 505 aa30.32■■■□□ 2.44
RAB40C-204ENST00000538492 CABLES1Q8TDN4 633 aa30.32■■■□□ 2.44
RAB40C-204ENST00000538492 PA2G4Q9UQ80 394 aaKnown RBP30.31■■■□□ 2.44
RAB40C-204ENST00000538492 MRE11P49959 708 aa30.3■■■□□ 2.44
RAB40C-204ENST00000538492 ANAPC15P60006 121 aa30.3■■■□□ 2.44
RAB40C-204ENST00000538492 GRPEL1Q9HAV7 217 aa30.3■■■□□ 2.44
RAB40C-204ENST00000538492 MTX1Q13505 466 aa30.29■■■□□ 2.44
RAB40C-204ENST00000538492 ZNF790Q6PG37 636 aa30.29■■■□□ 2.44
RAB40C-204ENST00000538492 UPF3BQ9BZI7 483 aaKnown RBP30.29■■■□□ 2.44
RAB40C-204ENST00000538492 TMEM94Q12767 1356 aa30.29■■■□□ 2.44
RAB40C-204ENST00000538492 DDX49Q9Y6V7 483 aaKnown RBP30.29■■■□□ 2.44
RAB40C-204ENST00000538492 GAS2L3Q86XJ1 694 aa30.28■■■□□ 2.44
RAB40C-204ENST00000538492 NFATC2IPQ8NCF5 419 aa30.28■■■□□ 2.44
RAB40C-204ENST00000538492 DDX21Q9NR30 783 aaKnown RBP eCLIP30.28■■■□□ 2.44
RAB40C-204ENST00000538492 NPHP3Q7Z494 1330 aa30.28■■■□□ 2.44
RAB40C-204ENST00000538492 ZDHHC9Q9Y397 364 aa30.28■■■□□ 2.44
RAB40C-204ENST00000538492 MST1RQ04912 1400 aa30.28■■■□□ 2.44
RAB40C-204ENST00000538492 CSB-PGBD3P0DP91 1061 aa30.27■■■□□ 2.44
RAB40C-204ENST00000538492 PDIA6Q15084 440 aa30.27■■■□□ 2.44
RAB40C-204ENST00000538492 CNTROBQ8N137 903 aa30.27■■■□□ 2.44
RAB40C-204ENST00000538492 TATP17735 454 aaPredicted RBP30.27■■■□□ 2.44
RAB40C-204ENST00000538492 SLC52A2Q9HAB3 445 aa30.27■■■□□ 2.44
RAB40C-204ENST00000538492 ADAMTS7Q9UKP4 1686 aa30.27■■■□□ 2.44
RAB40C-204ENST00000538492 MYL6BP14649 208 aa30.26■■■□□ 2.44
RAB40C-204ENST00000538492 LINS1Q8NG48 757 aa30.26■■■□□ 2.44
RAB40C-204ENST00000538492 KDM6AO15550 1401 aaPredicted RBP30.26■■■□□ 2.44
RAB40C-204ENST00000538492 CHRNA2Q15822 529 aa30.26■■■□□ 2.43
RAB40C-204ENST00000538492 CLASRPQ8N2M8 674 aaKnown RBP30.26■■■□□ 2.43
RAB40C-204ENST00000538492 DDX58O95786 925 aaKnown RBP30.25■■■□□ 2.43
RAB40C-204ENST00000538492 MCM2P49736 904 aa30.25■■■□□ 2.43
RAB40C-204ENST00000538492 GRM8O00222 908 aa30.25■■■□□ 2.43
RAB40C-204ENST00000538492 PHKG2P15735 406 aa30.25■■■□□ 2.43
RAB40C-204ENST00000538492 FOXD4L5Q5VV16 416 aaPredicted RBP30.24■■■□□ 2.43
RAB40C-204ENST00000538492 FOXD4L4Q8WXT5 416 aaPredicted RBP30.24■■■□□ 2.43
RAB40C-204ENST00000538492 SUCLG2Q96I99 432 aa30.24■■■□□ 2.43
RAB40C-204ENST00000538492 SGSM2O43147 1006 aa30.24■■■□□ 2.43
RAB40C-204ENST00000538492 MEGF6O75095 1541 aa30.24■■■□□ 2.43
RAB40C-204ENST00000538492 HSPA4P34932 840 aa30.23■■■□□ 2.43
RAB40C-204ENST00000538492 KLHL40Q2TBA0 621 aa30.23■■■□□ 2.43
RAB40C-204ENST00000538492 CWC27Q6UX04 472 aaKnown RBP30.23■■■□□ 2.43
RAB40C-204ENST00000538492 SPG7Q9UQ90 795 aa30.23■■■□□ 2.43
RAB40C-204ENST00000538492 RIC3Q7Z5B4 369 aa30.23■■■□□ 2.43
RAB40C-204ENST00000538492 KAZALD1Q96I82 304 aa30.23■■■□□ 2.43
RAB40C-204ENST00000538492 SCN11AQ9UI33 1791 aa30.22■■■□□ 2.43
RAB40C-204ENST00000538492 CHAMP1Q96JM3 812 aa30.22■■■□□ 2.43
RAB40C-204ENST00000538492 BICC1Q9H694 974 aaKnown RBP30.22■■■□□ 2.43
Retrieved 100 of 20,778 RNA–protein pairs in 125.1 ms