RNA–Protein interactions for RNA: ENST00000537533.1

PTPN6-209, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 3

Gene PTPN6, Length 673 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-209ENST00000537533 WDR43Q15061 677 aaKnown RBP eCLIP16.5■□□□□ 0.23
PTPN6-209ENST00000537533 ZBTB1Q9Y2K1 713 aa16.5■□□□□ 0.23
PTPN6-209ENST00000537533 GOLGB1Q14789 3259 aaKnown RBP16.49■□□□□ 0.23
PTPN6-209ENST00000537533 PNISRQ8TF01 805 aaKnown RBP16.49■□□□□ 0.23
PTPN6-209ENST00000537533 MMP10P09238 476 aa16.48■□□□□ 0.23
PTPN6-209ENST00000537533 TMPOP42166 694 aaKnown RBP16.48■□□□□ 0.23
PTPN6-209ENST00000537533 EIF5P55010 431 aaKnown RBP16.48■□□□□ 0.23
PTPN6-209ENST00000537533 RIPK4P57078 832 aa16.48■□□□□ 0.23
PTPN6-209ENST00000537533 KLHL34Q8N239 644 aa16.48■□□□□ 0.23
PTPN6-209ENST00000537533 NLGN2Q8NFZ4 835 aa16.48■□□□□ 0.23
PTPN6-209ENST00000537533 RUNDC1Q96C34 613 aa16.48■□□□□ 0.23
PTPN6-209ENST00000537533 ADAMTS8Q9UP79 889 aa16.48■□□□□ 0.23
PTPN6-209ENST00000537533 COL15A1P39059 1388 aa16.48■□□□□ 0.23
PTPN6-209ENST00000537533 CHD4Q14839 1912 aa16.47■□□□□ 0.23
PTPN6-209ENST00000537533 SRP68Q9UHB9 627 aaKnown RBP16.47■□□□□ 0.23
PTPN6-209ENST00000537533 NARFQ9UHQ1 456 aa16.47■□□□□ 0.23
PTPN6-209ENST00000537533 LAMB4A4D0S4 1761 aa16.46■□□□□ 0.23
PTPN6-209ENST00000537533 SNRPA1P09661 255 aaKnown RBP16.46■□□□□ 0.23
PTPN6-209ENST00000537533 LMOD3Q0VAK6 560 aa16.46■□□□□ 0.23
PTPN6-209ENST00000537533 A0A087WZG4 1122 aa16.45■□□□□ 0.22
PTPN6-209ENST00000537533 ZPR1O75312 459 aa16.45■□□□□ 0.22
PTPN6-209ENST00000537533 CANXP27824 592 aaKnown RBP16.45■□□□□ 0.22
PTPN6-209ENST00000537533 IL6STP40189 918 aaPredicted RBP16.45■□□□□ 0.22
PTPN6-209ENST00000537533 FKBP8Q14318 412 aa16.45■□□□□ 0.22
PTPN6-209ENST00000537533 USPL1Q5W0Q7 1092 aa16.45■□□□□ 0.22
PTPN6-209ENST00000537533 CCDC146Q8IYE0 955 aa16.45■□□□□ 0.22
PTPN6-209ENST00000537533 THUMPD2Q9BTF0 503 aaKnown RBP16.45■□□□□ 0.22
PTPN6-209ENST00000537533 MIS18AQ9NYP9 233 aa16.45■□□□□ 0.22
PTPN6-209ENST00000537533 USP16Q9Y5T5 823 aa16.45■□□□□ 0.22
PTPN6-209ENST00000537533 A1BGP04217 495 aa16.44■□□□□ 0.22
PTPN6-209ENST00000537533 TM4SF1P30408 202 aa16.44■□□□□ 0.22
PTPN6-209ENST00000537533 BABAM1Q9NWV8 329 aa16.44■□□□□ 0.22
PTPN6-209ENST00000537533 KIAA1551Q9HCM1 1747 aa16.44■□□□□ 0.22
PTPN6-209ENST00000537533 PRAMEF22A3QJZ6 481 aa16.43■□□□□ 0.22
PTPN6-209ENST00000537533 PARP3Q9Y6F1 533 aa16.43■□□□□ 0.22
PTPN6-209ENST00000537533 C10orf71Q711Q0 1435 aa16.43■□□□□ 0.22
PTPN6-209ENST00000537533 SCN7AQ01118 1682 aa16.43■□□□□ 0.22
PTPN6-209ENST00000537533 AFDNP55196 1824 aaKnown RBP16.42■□□□□ 0.22
PTPN6-209ENST00000537533 NRXN2Q9P2S2 1712 aa16.42■□□□□ 0.22
PTPN6-209ENST00000537533 EIF4A1P60842 406 aaKnown RBP16.42■□□□□ 0.22
PTPN6-209ENST00000537533 BCL2L12Q9HB09 334 aa16.42■□□□□ 0.22
PTPN6-209ENST00000537533 TRIM35Q9UPQ4 493 aa16.42■□□□□ 0.22
PTPN6-209ENST00000537533 BCORQ6W2J9 1755 aa16.41■□□□□ 0.22
PTPN6-209ENST00000537533 ANP32CO43423 234 aa16.41■□□□□ 0.22
PTPN6-209ENST00000537533 GIGYF1O75420 1035 aaPredicted RBP16.41■□□□□ 0.22
PTPN6-209ENST00000537533 DDR1Q08345 913 aa16.41■□□□□ 0.22
PTPN6-209ENST00000537533 GPR162Q16538 588 aa16.41■□□□□ 0.22
PTPN6-209ENST00000537533 CCDC184Q52MB2 194 aa16.41■□□□□ 0.22
PTPN6-209ENST00000537533 RRP7AQ9Y3A4 280 aaKnown RBP16.41■□□□□ 0.22
PTPN6-209ENST00000537533 N4BP2Q86UW6 1770 aaPredicted RBP16.41■□□□□ 0.22
PTPN6-209ENST00000537533 BRCA1P38398 1863 aaKnown RBP16.4■□□□□ 0.22
PTPN6-209ENST00000537533 POLRMTO00411 1230 aaKnown RBP16.4■□□□□ 0.22
PTPN6-209ENST00000537533 TGFB2P61812 414 aa16.4■□□□□ 0.22
PTPN6-209ENST00000537533 NFIXQ14938 502 aa16.39■□□□□ 0.21
PTPN6-209ENST00000537533 NEUROD2Q15784 382 aa16.39■□□□□ 0.21
PTPN6-209ENST00000537533 PXDNLA1KZ92 1463 aa16.39■□□□□ 0.21
PTPN6-209ENST00000537533 NBPF26B4DH59 902 aa16.38■□□□□ 0.21
PTPN6-209ENST00000537533 YBX3P16989 372 aaKnown RBP eCLIP16.38■□□□□ 0.21
PTPN6-209ENST00000537533 NBPF10Q6P3W6 841 aaKnown RBP16.38■□□□□ 0.21
PTPN6-209ENST00000537533 NBPF15Q8N660 670 aa16.38■□□□□ 0.21
PTPN6-209ENST00000537533 TSPYL4Q9UJ04 414 aa16.38■□□□□ 0.21
PTPN6-209ENST00000537533 TBC1D2BQ9UPU7 963 aa16.38■□□□□ 0.21
PTPN6-209ENST00000537533 CHL1O00533 1208 aa16.37■□□□□ 0.21
PTPN6-209ENST00000537533 RGL2O15211 777 aa16.37■□□□□ 0.21
PTPN6-209ENST00000537533 GRIN3BO60391 1043 aa16.37■□□□□ 0.21
PTPN6-209ENST00000537533 CAMTA2O94983 1202 aa16.37■□□□□ 0.21
PTPN6-209ENST00000537533 NPM2Q86SE8 214 aaKnown RBP16.37■□□□□ 0.21
PTPN6-209ENST00000537533 APAF1O14727 1248 aa16.36■□□□□ 0.21
PTPN6-209ENST00000537533 PIP4K2AP48426 406 aaPredicted RBP16.36■□□□□ 0.21
PTPN6-209ENST00000537533 DZIP3Q86Y13 1208 aaKnown RBP16.36■□□□□ 0.21
PTPN6-209ENST00000537533 ZNF330Q9Y3S2 320 aaPredicted RBP16.36■□□□□ 0.21
PTPN6-209ENST00000537533 YY1P25490 414 aa16.35■□□□□ 0.21
PTPN6-209ENST00000537533 CLEC4GQ6UXB4 293 aa16.35■□□□□ 0.21
PTPN6-209ENST00000537533 PELP1Q8IZL8 1130 aaKnown RBP16.35■□□□□ 0.21
PTPN6-209ENST00000537533 SERPINB2P05120 415 aa16.34■□□□□ 0.21
PTPN6-209ENST00000537533 TBC1D9BQ66K14 1250 aa16.34■□□□□ 0.21
PTPN6-209ENST00000537533 ERBB4Q15303 1308 aa16.34■□□□□ 0.21
PTPN6-209ENST00000537533 NUP98P52948 1817 aa16.33■□□□□ 0.21
PTPN6-209ENST00000537533 ARFGEF1Q9Y6D6 1849 aa16.33■□□□□ 0.21
PTPN6-209ENST00000537533 CFAP44Q96MT7 982 aa16.33■□□□□ 0.2
PTPN6-209ENST00000537533 MRS2Q9HD23 443 aa16.33■□□□□ 0.2
PTPN6-209ENST00000537533 DLEC1Q9Y238 1755 aa16.33■□□□□ 0.2
PTPN6-209ENST00000537533 A0A0G2JLW4 131 aa16.32■□□□□ 0.2
PTPN6-209ENST00000537533 ZNF853P0CG23 659 aa16.32■□□□□ 0.2
PTPN6-209ENST00000537533 DPEP1P16444 411 aa16.32■□□□□ 0.2
PTPN6-209ENST00000537533 KCNA3P22001 575 aa16.32■□□□□ 0.2
PTPN6-209ENST00000537533 ANKRD31Q8N7Z5 1873 aa16.32■□□□□ 0.2
PTPN6-209ENST00000537533 CARMIL3Q8ND23 1372 aa16.31■□□□□ 0.2
PTPN6-209ENST00000537533 NCBP3Q53F19 620 aaKnown RBP16.31■□□□□ 0.2
PTPN6-209ENST00000537533 BICDL1Q6ZP65 573 aa16.31■□□□□ 0.2
PTPN6-209ENST00000537533 ZNF652Q9Y2D9 606 aa16.31■□□□□ 0.2
PTPN6-209ENST00000537533 CALD1Q05682 793 aaKnown RBP16.3■□□□□ 0.2
PTPN6-209ENST00000537533 SETDB2Q96T68 719 aa16.3■□□□□ 0.2
PTPN6-209ENST00000537533 ERVV-1B6SEH8 477 aa16.29■□□□□ 0.2
PTPN6-209ENST00000537533 PDIA6Q15084 440 aa16.29■□□□□ 0.2
PTPN6-209ENST00000537533 CCDC27Q2M243 656 aa16.29■□□□□ 0.2
PTPN6-209ENST00000537533 LRP10Q7Z4F1 713 aa16.29■□□□□ 0.2
PTPN6-209ENST00000537533 IFT57Q9NWB7 429 aa16.29■□□□□ 0.2
PTPN6-209ENST00000537533 LAS1LQ9Y4W2 734 aaKnown RBP16.29■□□□□ 0.2
PTPN6-209ENST00000537533 HOXB7P09629 217 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms