RNA–Protein interactions for RNA: ENST00000535789.1

ATL3-202, Transcript of atlastin GTPase 3, humanhuman

TSL 4

Gene ATL3, Length 828 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-202ENST00000535789 TTC5Q8N0Z6 440 aa21.79■■□□□ 1.08
ATL3-202ENST00000535789 DLEC1Q9Y238 1755 aa21.78■■□□□ 1.08
ATL3-202ENST00000535789 ANKRD31Q8N7Z5 1873 aa21.77■■□□□ 1.08
ATL3-202ENST00000535789 PRAMEF22A3QJZ6 481 aa21.77■■□□□ 1.08
ATL3-202ENST00000535789 BTBD11A6QL63 1104 aa21.77■■□□□ 1.08
ATL3-202ENST00000535789 HTATSF1O43719 755 aaKnown RBP21.77■■□□□ 1.08
ATL3-202ENST00000535789 MMP10P09238 476 aa21.77■■□□□ 1.08
ATL3-202ENST00000535789 NFE2L2Q16236 605 aa21.77■■□□□ 1.08
ATL3-202ENST00000535789 THUMPD2Q9BTF0 503 aaKnown RBP21.77■■□□□ 1.08
ATL3-202ENST00000535789 RFC4P35249 363 aa21.76■■□□□ 1.07
ATL3-202ENST00000535789 PXDNLA1KZ92 1463 aa21.76■■□□□ 1.07
ATL3-202ENST00000535789 FKBP8Q14318 412 aa21.75■■□□□ 1.07
ATL3-202ENST00000535789 RTF1Q92541 710 aaKnown RBP21.75■■□□□ 1.07
ATL3-202ENST00000535789 ARFGEF1Q9Y6D6 1849 aa21.75■■□□□ 1.07
ATL3-202ENST00000535789 YBX3P16989 372 aaKnown RBP eCLIP21.74■■□□□ 1.07
ATL3-202ENST00000535789 FMNL2Q96PY5 1086 aa21.74■■□□□ 1.07
ATL3-202ENST00000535789 CD2APQ9Y5K6 639 aa21.74■■□□□ 1.07
ATL3-202ENST00000535789 DDR1Q08345 913 aa21.73■■□□□ 1.07
ATL3-202ENST00000535789 BCL2L12Q9HB09 334 aa21.73■■□□□ 1.07
ATL3-202ENST00000535789 MAPK8IP3Q9UPT6 1336 aa21.73■■□□□ 1.07
ATL3-202ENST00000535789 CCDC146Q8IYE0 955 aa21.72■■□□□ 1.07
ATL3-202ENST00000535789 NLGN1Q8N2Q7 840 aa21.72■■□□□ 1.07
ATL3-202ENST00000535789 MIS18AQ9NYP9 233 aa21.72■■□□□ 1.07
ATL3-202ENST00000535789 COL11A2P13942 1736 aaPredicted RBP21.72■■□□□ 1.07
ATL3-202ENST00000535789 CANXP27824 592 aaKnown RBP21.71■■□□□ 1.07
ATL3-202ENST00000535789 EIF5P55010 431 aaKnown RBP21.71■■□□□ 1.07
ATL3-202ENST00000535789 USPL1Q5W0Q7 1092 aa21.71■■□□□ 1.07
ATL3-202ENST00000535789 NUP98P52948 1817 aa21.71■■□□□ 1.07
ATL3-202ENST00000535789 CCDC184Q52MB2 194 aa21.7■■□□□ 1.06
ATL3-202ENST00000535789 USP16Q9Y5T5 823 aa21.7■■□□□ 1.06
ATL3-202ENST00000535789 A1BGP04217 495 aa21.69■■□□□ 1.06
ATL3-202ENST00000535789 NARFQ9UHQ1 456 aa21.69■■□□□ 1.06
ATL3-202ENST00000535789 CACNA1SQ13698 1873 aa21.69■■□□□ 1.06
ATL3-202ENST00000535789 STARD3NLO95772 234 aa21.68■■□□□ 1.06
ATL3-202ENST00000535789 TMPOP42166 694 aaKnown RBP21.68■■□□□ 1.06
ATL3-202ENST00000535789 PIP4K2AP48426 406 aaPredicted RBP21.68■■□□□ 1.06
ATL3-202ENST00000535789 TAF7Q15545 349 aaPredicted RBP21.68■■□□□ 1.06
ATL3-202ENST00000535789 ADAMTS8Q9UP79 889 aa21.68■■□□□ 1.06
ATL3-202ENST00000535789 POLRMTO00411 1230 aaKnown RBP21.67■■□□□ 1.06
ATL3-202ENST00000535789 NEFMP07197 916 aa21.67■■□□□ 1.06
ATL3-202ENST00000535789 TM4SF1P30408 202 aa21.67■■□□□ 1.06
ATL3-202ENST00000535789 PELP1Q8IZL8 1130 aaKnown RBP21.67■■□□□ 1.06
ATL3-202ENST00000535789 RRP7AQ9Y3A4 280 aaKnown RBP21.67■■□□□ 1.06
ATL3-202ENST00000535789 YY1P25490 414 aa21.66■■□□□ 1.06
ATL3-202ENST00000535789 GPR162Q16538 588 aa21.66■■□□□ 1.06
ATL3-202ENST00000535789 TEX13AQ9BXU3 409 aaPredicted RBP21.66■■□□□ 1.06
ATL3-202ENST00000535789 PNNQ9H307 717 aaKnown RBP21.66■■□□□ 1.06
ATL3-202ENST00000535789 WWC3Q9ULE0 1092 aa21.66■■□□□ 1.06
ATL3-202ENST00000535789 DCAF8L1A6NGE4 600 aa21.65■■□□□ 1.06
ATL3-202ENST00000535789 IL6STP40189 918 aaPredicted RBP21.65■■□□□ 1.06
ATL3-202ENST00000535789 RIPK4P57078 832 aa21.65■■□□□ 1.06
ATL3-202ENST00000535789 CARMIL3Q8ND23 1372 aa21.64■■□□□ 1.06
ATL3-202ENST00000535789 NBPF26B4DH59 902 aa21.64■■□□□ 1.05
ATL3-202ENST00000535789 ZPR1O75312 459 aa21.64■■□□□ 1.05
ATL3-202ENST00000535789 SNRPA1P09661 255 aaKnown RBP21.64■■□□□ 1.05
ATL3-202ENST00000535789 NFIXQ14938 502 aa21.64■■□□□ 1.05
ATL3-202ENST00000535789 NBPF10Q6P3W6 841 aaKnown RBP21.64■■□□□ 1.05
ATL3-202ENST00000535789 NBPF15Q8N660 670 aa21.64■■□□□ 1.05
ATL3-202ENST00000535789 PARP3Q9Y6F1 533 aa21.64■■□□□ 1.05
ATL3-202ENST00000535789 EIF4A1P60842 406 aaKnown RBP21.63■■□□□ 1.05
ATL3-202ENST00000535789 WDR43Q15061 677 aaKnown RBP eCLIP21.63■■□□□ 1.05
ATL3-202ENST00000535789 RUNDC1Q96C34 613 aa21.63■■□□□ 1.05
ATL3-202ENST00000535789 TRIM35Q9UPQ4 493 aa21.63■■□□□ 1.05
ATL3-202ENST00000535789 ANKRD36CQ5JPF3 1778 aa21.62■■□□□ 1.05
ATL3-202ENST00000535789 ARFGEF2Q9Y6D5 1785 aa21.62■■□□□ 1.05
ATL3-202ENST00000535789 TBC1D2BQ9UPU7 963 aa21.62■■□□□ 1.05
ATL3-202ENST00000535789 SBF1O95248 1867 aa21.61■■□□□ 1.05
ATL3-202ENST00000535789 CAMTA2O94983 1202 aa21.61■■□□□ 1.05
ATL3-202ENST00000535789 ZNF330Q9Y3S2 320 aaPredicted RBP21.61■■□□□ 1.05
ATL3-202ENST00000535789 GIGYF1O75420 1035 aaPredicted RBP21.6■■□□□ 1.05
ATL3-202ENST00000535789 DPEP1P16444 411 aa21.59■■□□□ 1.05
ATL3-202ENST00000535789 KCNA3P22001 575 aa21.59■■□□□ 1.05
ATL3-202ENST00000535789 NEUROD2Q15784 382 aa21.59■■□□□ 1.05
ATL3-202ENST00000535789 TBC1D9BQ66K14 1250 aa21.59■■□□□ 1.05
ATL3-202ENST00000535789 PNISRQ8TF01 805 aaKnown RBP21.59■■□□□ 1.05
ATL3-202ENST00000535789 TNRC6CQ9HCJ0 1690 aaKnown RBP21.59■■□□□ 1.05
ATL3-202ENST00000535789 A0A0G2JLW4 131 aa21.58■■□□□ 1.05
ATL3-202ENST00000535789 CCDC88AQ3V6T2 1871 aa21.58■■□□□ 1.04
ATL3-202ENST00000535789 A0A087WZG4 1122 aa21.57■■□□□ 1.04
ATL3-202ENST00000535789 TGFB2P61812 414 aa21.57■■□□□ 1.04
ATL3-202ENST00000535789 DZIP3Q86Y13 1208 aaKnown RBP21.56■■□□□ 1.04
ATL3-202ENST00000535789 TSPYL4Q9UJ04 414 aa21.56■■□□□ 1.04
ATL3-202ENST00000535789 LMOD3Q0VAK6 560 aa21.55■■□□□ 1.04
ATL3-202ENST00000535789 BICDL1Q6ZP65 573 aa21.55■■□□□ 1.04
ATL3-202ENST00000535789 SERPINB2P05120 415 aa21.54■■□□□ 1.04
ATL3-202ENST00000535789 CHRNA5P30532 468 aa21.54■■□□□ 1.04
ATL3-202ENST00000535789 KRT24Q2M2I5 525 aa21.54■■□□□ 1.04
ATL3-202ENST00000535789 ADCY9O60503 1353 aa21.53■■□□□ 1.04
ATL3-202ENST00000535789 GRIN3BO60391 1043 aa21.53■■□□□ 1.04
ATL3-202ENST00000535789 APAF1O14727 1248 aa21.52■■□□□ 1.04
ATL3-202ENST00000535789 LRP10Q7Z4F1 713 aa21.52■■□□□ 1.04
ATL3-202ENST00000535789 FER1L6Q2WGJ9 1857 aa21.52■■□□□ 1.03
ATL3-202ENST00000535789 LAMB2P55268 1798 aa21.51■■□□□ 1.03
ATL3-202ENST00000535789 SLX4Q8IY92 1834 aa21.51■■□□□ 1.03
ATL3-202ENST00000535789 CHL1O00533 1208 aa21.51■■□□□ 1.03
ATL3-202ENST00000535789 ZNF784Q8NCA9 323 aaPredicted RBP21.51■■□□□ 1.03
ATL3-202ENST00000535789 BABAM1Q9NWV8 329 aa21.51■■□□□ 1.03
ATL3-202ENST00000535789 PRR5LQ6MZQ0 368 aa21.5■■□□□ 1.03
ATL3-202ENST00000535789 CCDC24Q8N4L8 307 aa21.5■■□□□ 1.03
ATL3-202ENST00000535789 PDIA6Q15084 440 aa21.49■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms