RNA–Protein interactions for RNA: ENST00000535659.6

CNN1-202, Transcript of calponin 1, humanhuman

TSL 2 BASIC

Gene CNN1, Length 1,527 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN1-202ENST00000535659 C5P01031 1676 aa20.07■□□□□ 0.8
CNN1-202ENST00000535659 ZNF831Q5JPB2 1677 aa20.07■□□□□ 0.8
CNN1-202ENST00000535659 HDGFL1Q5TGJ6 251 aa20.07■□□□□ 0.8
CNN1-202ENST00000535659 TJP1Q07157 1748 aa20.07■□□□□ 0.8
CNN1-202ENST00000535659 CCDC30Q5VVM6 783 aa20.06■□□□□ 0.8
CNN1-202ENST00000535659 NECTIN2Q92692 538 aa20.06■□□□□ 0.8
CNN1-202ENST00000535659 A1BGP04217 495 aa20.05■□□□□ 0.8
CNN1-202ENST00000535659 RC3H1Q5TC82 1133 aaKnown RBP20.05■□□□□ 0.8
CNN1-202ENST00000535659 ZNF428Q96B54 188 aa20.05■□□□□ 0.8
CNN1-202ENST00000535659 CICQ96RK0 1608 aaPredicted RBP20.05■□□□□ 0.8
CNN1-202ENST00000535659 CRKLP46109 303 aaKnown RBP20.04■□□□□ 0.8
CNN1-202ENST00000535659 INTS5Q6P9B9 1019 aaKnown RBP20.04■□□□□ 0.8
CNN1-202ENST00000535659 CCDC87Q9NVE4 849 aa20.04■□□□□ 0.8
CNN1-202ENST00000535659 LAMB4A4D0S4 1761 aa20.03■□□□□ 0.8
CNN1-202ENST00000535659 DBF4Q9UBU7 674 aaPredicted RBP20.02■□□□□ 0.8
CNN1-202ENST00000535659 ERBB4Q15303 1308 aa20.02■□□□□ 0.79
CNN1-202ENST00000535659 CNTNAP4Q9C0A0 1308 aa20.02■□□□□ 0.79
CNN1-202ENST00000535659 COL5A3P25940 1745 aaPredicted RBP20.02■□□□□ 0.79
CNN1-202ENST00000535659 NBPF26B4DH59 902 aa20.02■□□□□ 0.79
CNN1-202ENST00000535659 NBPF14Q5TI25 921 aa20.02■□□□□ 0.79
CNN1-202ENST00000535659 NBPF10Q6P3W6 841 aaKnown RBP20.02■□□□□ 0.79
CNN1-202ENST00000535659 NBPF15Q8N660 670 aa20.02■□□□□ 0.79
CNN1-202ENST00000535659 TCERG1O14776 1098 aaKnown RBP20.01■□□□□ 0.79
CNN1-202ENST00000535659 CANXP27824 592 aaKnown RBP20.01■□□□□ 0.79
CNN1-202ENST00000535659 PDIA6Q15084 440 aa20.01■□□□□ 0.79
CNN1-202ENST00000535659 STK31Q9BXU1 1019 aa20.01■□□□□ 0.79
CNN1-202ENST00000535659 DDX21Q9NR30 783 aaKnown RBP eCLIP20.01■□□□□ 0.79
CNN1-202ENST00000535659 CHPF2Q9P2E5 772 aa20.01■□□□□ 0.79
CNN1-202ENST00000535659 ZBTB1Q9Y2K1 713 aa20.01■□□□□ 0.79
CNN1-202ENST00000535659 RREB1Q92766 1687 aa20■□□□□ 0.79
CNN1-202ENST00000535659 SLC4A2P04920 1241 aa20■□□□□ 0.79
CNN1-202ENST00000535659 PIP4K2AP48426 406 aaPredicted RBP20■□□□□ 0.79
CNN1-202ENST00000535659 ALDH1L2Q3SY69 923 aa20■□□□□ 0.79
CNN1-202ENST00000535659 AK7Q96M32 723 aa20■□□□□ 0.79
CNN1-202ENST00000535659 TAF1LQ8IZX4 1826 aa19.99■□□□□ 0.79
CNN1-202ENST00000535659 RPS6KA4O75676 772 aa19.99■□□□□ 0.79
CNN1-202ENST00000535659 RARSP54136 660 aaKnown RBP19.99■□□□□ 0.79
CNN1-202ENST00000535659 SSH1Q8WYL5 1049 aa19.99■□□□□ 0.79
CNN1-202ENST00000535659 AKT1S1Q96B36 256 aa19.99■□□□□ 0.79
CNN1-202ENST00000535659 C4BP0C0L5 1744 aa19.98■□□□□ 0.79
CNN1-202ENST00000535659 MYL6BP14649 208 aa19.98■□□□□ 0.79
CNN1-202ENST00000535659 IL6STP40189 918 aaPredicted RBP19.98■□□□□ 0.79
CNN1-202ENST00000535659 PROSER3Q2NL68 480 aa19.98■□□□□ 0.79
CNN1-202ENST00000535659 HYPKQ9NX55 129 aa19.98■□□□□ 0.79
CNN1-202ENST00000535659 GNPATO15228 680 aa19.97■□□□□ 0.79
CNN1-202ENST00000535659 ANXA1P04083 346 aa19.97■□□□□ 0.79
CNN1-202ENST00000535659 EIF5P55010 431 aaKnown RBP19.97■□□□□ 0.79
CNN1-202ENST00000535659 RTCBQ9Y3I0 505 aaKnown RBP19.97■□□□□ 0.79
CNN1-202ENST00000535659 NUP188Q5SRE5 1749 aa19.97■□□□□ 0.79
CNN1-202ENST00000535659 SLC15A2Q16348 729 aa19.97■□□□□ 0.79
CNN1-202ENST00000535659 ZNF827Q17R98 1081 aa19.97■□□□□ 0.79
CNN1-202ENST00000535659 NPM2Q86SE8 214 aaKnown RBP19.97■□□□□ 0.79
CNN1-202ENST00000535659 STK32BQ9NY57 414 aa19.97■□□□□ 0.79
CNN1-202ENST00000535659 TFCP2L1Q9NZI6 479 aa19.97■□□□□ 0.79
CNN1-202ENST00000535659 LRP10Q7Z4F1 713 aa19.96■□□□□ 0.79
CNN1-202ENST00000535659 MRPL50Q8N5N7 158 aaKnown RBP19.96■□□□□ 0.79
CNN1-202ENST00000535659 RCAN3Q9UKA8 241 aa19.96■□□□□ 0.79
CNN1-202ENST00000535659 TRAPPC3LQ5T215 181 aa19.95■□□□□ 0.78
CNN1-202ENST00000535659 BCL2L13Q9BXK5 485 aa19.95■□□□□ 0.78
CNN1-202ENST00000535659 SMC4Q9NTJ3 1288 aa19.95■□□□□ 0.78
CNN1-202ENST00000535659 ZNF330Q9Y3S2 320 aaPredicted RBP19.95■□□□□ 0.78
CNN1-202ENST00000535659 COPS6Q7L5N1 327 aa19.94■□□□□ 0.78
CNN1-202ENST00000535659 PHAXQ9H814 394 aaKnown RBP19.94■□□□□ 0.78
CNN1-202ENST00000535659 ANO8Q9HCE9 1232 aaPredicted RBP19.94■□□□□ 0.78
CNN1-202ENST00000535659 MYH14Q7Z406 1995 aaKnown RBP19.94■□□□□ 0.78
CNN1-202ENST00000535659 BCAR3O75815 825 aa19.93■□□□□ 0.78
CNN1-202ENST00000535659 BRPF1P55201 1214 aaPredicted RBP19.93■□□□□ 0.78
CNN1-202ENST00000535659 SMIM5Q71RC9 77 aa19.93■□□□□ 0.78
CNN1-202ENST00000535659 G2E3Q7L622 706 aa19.93■□□□□ 0.78
CNN1-202ENST00000535659 A0A087WZG4 1122 aa19.92■□□□□ 0.78
CNN1-202ENST00000535659 ADRA2BP18089 450 aa19.92■□□□□ 0.78
CNN1-202ENST00000535659 SSFA2P28290 1259 aa19.92■□□□□ 0.78
CNN1-202ENST00000535659 AMIGO3Q86WK7 504 aa19.92■□□□□ 0.78
CNN1-202ENST00000535659 FLAD1Q8NFF5 587 aa19.92■□□□□ 0.78
CNN1-202ENST00000535659 XAGE3Q8WTP9 111 aa19.92■□□□□ 0.78
CNN1-202ENST00000535659 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.92■□□□□ 0.78
CNN1-202ENST00000535659 PHF14O94880 888 aa19.92■□□□□ 0.78
CNN1-202ENST00000535659 AIMP1Q12904 312 aaKnown RBP19.92■□□□□ 0.78
CNN1-202ENST00000535659 ARHGEF1Q92888 912 aaKnown RBP19.92■□□□□ 0.78
CNN1-202ENST00000535659 ARXQ96QS3 562 aa19.92■□□□□ 0.78
CNN1-202ENST00000535659 LRP5O75197 1615 aa19.91■□□□□ 0.78
CNN1-202ENST00000535659 FLIIQ13045 1269 aa19.9■□□□□ 0.78
CNN1-202ENST00000535659 TTLL7Q6ZT98 887 aa19.9■□□□□ 0.78
CNN1-202ENST00000535659 DZIP3Q86Y13 1208 aaKnown RBP19.9■□□□□ 0.78
CNN1-202ENST00000535659 TBC1D2BQ9UPU7 963 aa19.9■□□□□ 0.78
CNN1-202ENST00000535659 COL15A1P39059 1388 aa19.89■□□□□ 0.78
CNN1-202ENST00000535659 RFC4P35249 363 aa19.89■□□□□ 0.77
CNN1-202ENST00000535659 ANKRD13DQ6ZTN6 518 aa19.89■□□□□ 0.77
CNN1-202ENST00000535659 NOB1Q9ULX3 412 aaKnown RBP19.89■□□□□ 0.77
CNN1-202ENST00000535659 COL23A1Q86Y22 540 aaPredicted RBP19.88■□□□□ 0.77
CNN1-202ENST00000535659 UBR3Q6ZT12 1888 aa19.88■□□□□ 0.77
CNN1-202ENST00000535659 DDX58O95786 925 aaKnown RBP19.87■□□□□ 0.77
CNN1-202ENST00000535659 CENPBP07199 599 aaPredicted RBP19.87■□□□□ 0.77
CNN1-202ENST00000535659 KIF6Q6ZMV9 814 aa19.87■□□□□ 0.77
CNN1-202ENST00000535659 NARFQ9UHQ1 456 aa19.87■□□□□ 0.77
CNN1-202ENST00000535659 PNPLA7Q6ZV29 1317 aa19.87■□□□□ 0.77
CNN1-202ENST00000535659 IPO8O15397 1037 aaKnown RBP19.86■□□□□ 0.77
CNN1-202ENST00000535659 ZPR1O75312 459 aa19.86■□□□□ 0.77
CNN1-202ENST00000535659 FKBP5Q13451 457 aaPredicted RBP19.86■□□□□ 0.77
CNN1-202ENST00000535659 PLBD2Q8NHP8 589 aa19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms