RNA–Protein interactions for RNA: ENST00000534958.5

PACRG-204, Transcript of parkin coregulated, humanhuman

TSL 3

Gene PACRG, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACRG-204ENST00000534958 DNAJC10Q8IXB1 793 aa13.57□□□□□ -0.24
PACRG-204ENST00000534958 DBF4Q9UBU7 674 aaPredicted RBP13.57□□□□□ -0.24
PACRG-204ENST00000534958 RCAN3Q9UKA8 241 aa13.57□□□□□ -0.24
PACRG-204ENST00000534958 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.56□□□□□ -0.24
PACRG-204ENST00000534958 SMC4Q9NTJ3 1288 aa13.56□□□□□ -0.24
PACRG-204ENST00000534958 KIF16BQ96L93 1317 aa13.56□□□□□ -0.24
PACRG-204ENST00000534958 CNTNAP4Q9C0A0 1308 aa13.56□□□□□ -0.24
PACRG-204ENST00000534958 RREB1Q92766 1687 aa13.56□□□□□ -0.24
PACRG-204ENST00000534958 CYP19A1P11511 503 aaPredicted RBP13.55□□□□□ -0.24
PACRG-204ENST00000534958 RARSP54136 660 aaKnown RBP13.55□□□□□ -0.24
PACRG-204ENST00000534958 RC3H1Q5TC82 1133 aaKnown RBP13.55□□□□□ -0.24
PACRG-204ENST00000534958 SLC4A9Q96Q91 983 aa13.55□□□□□ -0.24
PACRG-204ENST00000534958 DDX21Q9NR30 783 aaKnown RBP eCLIP13.55□□□□□ -0.24
PACRG-204ENST00000534958 HYPKQ9NX55 129 aa13.55□□□□□ -0.24
PACRG-204ENST00000534958 USP16Q9Y5T5 823 aa13.55□□□□□ -0.24
PACRG-204ENST00000534958 C4BP0C0L5 1744 aa13.55□□□□□ -0.24
PACRG-204ENST00000534958 BRPF1P55201 1214 aaPredicted RBP13.54□□□□□ -0.24
PACRG-204ENST00000534958 CCDC87Q9NVE4 849 aa13.54□□□□□ -0.24
PACRG-204ENST00000534958 PRAMEF22A3QJZ6 481 aa13.53□□□□□ -0.24
PACRG-204ENST00000534958 IPO8O15397 1037 aaKnown RBP13.53□□□□□ -0.24
PACRG-204ENST00000534958 CANXP27824 592 aaKnown RBP13.53□□□□□ -0.24
PACRG-204ENST00000534958 IL6STP40189 918 aaPredicted RBP13.53□□□□□ -0.24
PACRG-204ENST00000534958 CRKLP46109 303 aaKnown RBP13.53□□□□□ -0.24
PACRG-204ENST00000534958 ITPK1Q13572 414 aa13.53□□□□□ -0.24
PACRG-204ENST00000534958 SSH1Q8WYL5 1049 aa13.53□□□□□ -0.24
PACRG-204ENST00000534958 NECTIN2Q92692 538 aa13.53□□□□□ -0.24
PACRG-204ENST00000534958 AK7Q96M32 723 aa13.53□□□□□ -0.24
PACRG-204ENST00000534958 CHPF2Q9P2E5 772 aa13.53□□□□□ -0.24
PACRG-204ENST00000534958 A0A087WZG4 1122 aa13.52□□□□□ -0.25
PACRG-204ENST00000534958 DDX58O95786 925 aaKnown RBP13.52□□□□□ -0.25
PACRG-204ENST00000534958 SLC4A2P04920 1241 aa13.52□□□□□ -0.25
PACRG-204ENST00000534958 MS4A1P11836 297 aa13.52□□□□□ -0.25
PACRG-204ENST00000534958 EN1Q05925 392 aaPredicted RBP13.52□□□□□ -0.25
PACRG-204ENST00000534958 LINC00116Q8NCU8 138 aa13.52□□□□□ -0.25
PACRG-204ENST00000534958 UPF1Q92900 1129 aaKnown RBP eCLIP13.52□□□□□ -0.25
PACRG-204ENST00000534958 CAMKK2Q96RR4 588 aa13.52□□□□□ -0.25
PACRG-204ENST00000534958 PTPRCP08575 1304 aa13.52□□□□□ -0.25
PACRG-204ENST00000534958 MYH14Q7Z406 1995 aaKnown RBP13.52□□□□□ -0.25
PACRG-204ENST00000534958 NUP188Q5SRE5 1749 aa13.51□□□□□ -0.25
PACRG-204ENST00000534958 A1BGP04217 495 aa13.51□□□□□ -0.25
PACRG-204ENST00000534958 MRPL50Q8N5N7 158 aaKnown RBP13.51□□□□□ -0.25
PACRG-204ENST00000534958 EZH2Q15910 746 aaKnown RBP13.5□□□□□ -0.25
PACRG-204ENST00000534958 KIF6Q6ZMV9 814 aa13.5□□□□□ -0.25
PACRG-204ENST00000534958 LRRC4BQ9NT99 713 aa13.5□□□□□ -0.25
PACRG-204ENST00000534958 ZBTB1Q9Y2K1 713 aa13.5□□□□□ -0.25
PACRG-204ENST00000534958 RTCBQ9Y3I0 505 aaKnown RBP13.5□□□□□ -0.25
PACRG-204ENST00000534958 UBR3Q6ZT12 1888 aa13.5□□□□□ -0.25
PACRG-204ENST00000534958 GNPATO15228 680 aa13.49□□□□□ -0.25
PACRG-204ENST00000534958 RPS6KA4O75676 772 aa13.49□□□□□ -0.25
PACRG-204ENST00000534958 MYL6BP14649 208 aa13.49□□□□□ -0.25
PACRG-204ENST00000534958 FLIIQ13045 1269 aa13.49□□□□□ -0.25
PACRG-204ENST00000534958 NBPF14Q5TI25 921 aa13.49□□□□□ -0.25
PACRG-204ENST00000534958 INTS5Q6P9B9 1019 aaKnown RBP13.49□□□□□ -0.25
PACRG-204ENST00000534958 FLAD1Q8NFF5 587 aa13.49□□□□□ -0.25
PACRG-204ENST00000534958 ARHGAP45Q92619 1136 aa13.49□□□□□ -0.25
PACRG-204ENST00000534958 BCL2L13Q9BXK5 485 aa13.49□□□□□ -0.25
PACRG-204ENST00000534958 API5Q9BZZ5 524 aaKnown RBP13.49□□□□□ -0.25
PACRG-204ENST00000534958 STK32BQ9NY57 414 aa13.49□□□□□ -0.25
PACRG-204ENST00000534958 QSER1Q2KHR3 1735 aa13.49□□□□□ -0.25
PACRG-204ENST00000534958 COL15A1P39059 1388 aa13.48□□□□□ -0.25
PACRG-204ENST00000534958 NBPF26B4DH59 902 aa13.48□□□□□ -0.25
PACRG-204ENST00000534958 TCERG1O14776 1098 aaKnown RBP13.48□□□□□ -0.25
PACRG-204ENST00000534958 SSFA2P28290 1259 aa13.48□□□□□ -0.25
PACRG-204ENST00000534958 FKBP5Q13451 457 aaPredicted RBP13.48□□□□□ -0.25
PACRG-204ENST00000534958 ZKSCAN2Q63HK3 967 aa13.48□□□□□ -0.25
PACRG-204ENST00000534958 NBPF10Q6P3W6 841 aaKnown RBP13.48□□□□□ -0.25
PACRG-204ENST00000534958 ILDR2Q71H61 639 aa13.48□□□□□ -0.25
PACRG-204ENST00000534958 DEFB132Q7Z7B7 95 aa13.48□□□□□ -0.25
PACRG-204ENST00000534958 PROM2Q8N271 834 aa13.48□□□□□ -0.25
PACRG-204ENST00000534958 NBPF15Q8N660 670 aa13.48□□□□□ -0.25
PACRG-204ENST00000534958 ZNF330Q9Y3S2 320 aaPredicted RBP13.48□□□□□ -0.25
PACRG-204ENST00000534958 RGL2O15211 777 aa13.47□□□□□ -0.25
PACRG-204ENST00000534958 BCAR3O75815 825 aa13.47□□□□□ -0.25
PACRG-204ENST00000534958 EIF5P55010 431 aaKnown RBP13.47□□□□□ -0.25
PACRG-204ENST00000534958 KCNQ4P56696 695 aa13.47□□□□□ -0.25
PACRG-204ENST00000534958 PDIA6Q15084 440 aa13.47□□□□□ -0.25
PACRG-204ENST00000534958 PROSER3Q2NL68 480 aa13.47□□□□□ -0.25
PACRG-204ENST00000534958 XAGE3Q8WTP9 111 aa13.47□□□□□ -0.25
PACRG-204ENST00000534958 FRAT1Q92837 279 aaPredicted RBP13.47□□□□□ -0.25
PACRG-204ENST00000534958 ANXA1P04083 346 aa13.46□□□□□ -0.25
PACRG-204ENST00000534958 RRP1P56182 461 aaKnown RBP13.46□□□□□ -0.25
PACRG-204ENST00000534958 HSP90AB3PQ58FF7 597 aa13.46□□□□□ -0.25
PACRG-204ENST00000534958 TRAPPC3LQ5T215 181 aa13.46□□□□□ -0.25
PACRG-204ENST00000534958 ATF7IPQ6VMQ6 1270 aa13.46□□□□□ -0.25
PACRG-204ENST00000534958 COPS6Q7L5N1 327 aa13.46□□□□□ -0.25
PACRG-204ENST00000534958 FTSJ3Q8IY81 847 aaKnown RBP13.46□□□□□ -0.25
PACRG-204ENST00000534958 TFCP2L1Q9NZI6 479 aa13.46□□□□□ -0.25
PACRG-204ENST00000534958 ZNF652Q9Y2D9 606 aa13.46□□□□□ -0.25
PACRG-204ENST00000534958 PXDNLA1KZ92 1463 aa13.46□□□□□ -0.25
PACRG-204ENST00000534958 BCORQ6W2J9 1755 aa13.45□□□□□ -0.26
PACRG-204ENST00000534958 N4BP2Q86UW6 1770 aaPredicted RBP13.45□□□□□ -0.26
PACRG-204ENST00000534958 ARFGEF2Q9Y6D5 1785 aa13.45□□□□□ -0.26
PACRG-204ENST00000534958 C4AP0C0L4 1744 aa13.45□□□□□ -0.26
PACRG-204ENST00000534958 SCN7AQ01118 1682 aa13.45□□□□□ -0.26
PACRG-204ENST00000534958 RFC4P35249 363 aa13.45□□□□□ -0.26
PACRG-204ENST00000534958 PIP4K2AP48426 406 aaPredicted RBP13.45□□□□□ -0.26
PACRG-204ENST00000534958 AIMP1Q12904 312 aaKnown RBP13.45□□□□□ -0.26
PACRG-204ENST00000534958 ANKRD13DQ6ZTN6 518 aa13.45□□□□□ -0.26
PACRG-204ENST00000534958 RIC3Q7Z5B4 369 aa13.45□□□□□ -0.26
PACRG-204ENST00000534958 DZIP3Q86Y13 1208 aaKnown RBP13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms