RNA–Protein interactions for RNA: ENST00000534516.2

NCAM1-218, Transcript of neural cell adhesion molecule 1, humanhuman

TSL 3

Gene NCAM1, Length 560 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCAM1-218ENST00000534516 SLC16A10Q8TF71 515 aa11.65□□□□□ -0.54
NCAM1-218ENST00000534516 ARXQ96QS3 562 aa11.65□□□□□ -0.54
NCAM1-218ENST00000534516 NUDCQ9Y266 331 aa11.65□□□□□ -0.54
NCAM1-218ENST00000534516 GNAT3A8MTJ3 354 aa11.64□□□□□ -0.55
NCAM1-218ENST00000534516 GALR2O43603 387 aaPredicted RBP11.64□□□□□ -0.55
NCAM1-218ENST00000534516 GAS2L2Q8NHY3 880 aa11.64□□□□□ -0.55
NCAM1-218ENST00000534516 SYT17Q9BSW7 474 aa11.64□□□□□ -0.55
NCAM1-218ENST00000534516 TSPYL2Q9H2G4 693 aaPredicted RBP11.64□□□□□ -0.55
NCAM1-218ENST00000534516 C4AP0C0L4 1744 aa11.63□□□□□ -0.55
NCAM1-218ENST00000534516 KCNQ3O43525 872 aa11.63□□□□□ -0.55
NCAM1-218ENST00000534516 FCHSD2O94868 740 aa11.63□□□□□ -0.55
NCAM1-218ENST00000534516 ZEB1P37275 1124 aaPredicted RBP11.63□□□□□ -0.55
NCAM1-218ENST00000534516 DCTN1Q14203 1278 aa11.63□□□□□ -0.55
NCAM1-218ENST00000534516 MCM10Q7L590 875 aa11.63□□□□□ -0.55
NCAM1-218ENST00000534516 DNAJC10Q8IXB1 793 aa11.63□□□□□ -0.55
NCAM1-218ENST00000534516 KLHL34Q8N239 644 aa11.63□□□□□ -0.55
NCAM1-218ENST00000534516 CICQ96RK0 1608 aaPredicted RBP11.63□□□□□ -0.55
NCAM1-218ENST00000534516 RALBP1Q15311 655 aa11.62□□□□□ -0.55
NCAM1-218ENST00000534516 DCBLD2Q96PD2 775 aa11.62□□□□□ -0.55
NCAM1-218ENST00000534516 PLEKHF1Q96S99 279 aa11.62□□□□□ -0.55
NCAM1-218ENST00000534516 CNTNAP4Q9C0A0 1308 aa11.61□□□□□ -0.55
NCAM1-218ENST00000534516 GOLGB1Q14789 3259 aaKnown RBP11.61□□□□□ -0.55
NCAM1-218ENST00000534516 UTRNP46939 3433 aa11.61□□□□□ -0.55
NCAM1-218ENST00000534516 SSFA2P28290 1259 aa11.61□□□□□ -0.55
NCAM1-218ENST00000534516 CRKLP46109 303 aaKnown RBP11.61□□□□□ -0.55
NCAM1-218ENST00000534516 INTS5Q6P9B9 1019 aaKnown RBP11.61□□□□□ -0.55
NCAM1-218ENST00000534516 NLGN2Q8NFZ4 835 aa11.61□□□□□ -0.55
NCAM1-218ENST00000534516 CEMIPQ8WUJ3 1361 aa11.61□□□□□ -0.55
NCAM1-218ENST00000534516 POLD1P28340 1107 aa11.6□□□□□ -0.55
NCAM1-218ENST00000534516 RC3H1Q5TC82 1133 aaKnown RBP11.6□□□□□ -0.55
NCAM1-218ENST00000534516 FLAD1Q8NFF5 587 aa11.6□□□□□ -0.55
NCAM1-218ENST00000534516 ARHGEF1Q92888 912 aaKnown RBP11.6□□□□□ -0.55
NCAM1-218ENST00000534516 RTCBQ9Y3I0 505 aaKnown RBP11.6□□□□□ -0.55
NCAM1-218ENST00000534516 MYBBP1AQ9BQG0 1328 aaKnown RBP11.6□□□□□ -0.55
NCAM1-218ENST00000534516 RPS6KA4O75676 772 aa11.59□□□□□ -0.55
NCAM1-218ENST00000534516 CYP19A1P11511 503 aaPredicted RBP11.59□□□□□ -0.55
NCAM1-218ENST00000534516 TEFQ10587 303 aa11.59□□□□□ -0.55
NCAM1-218ENST00000534516 TRAPPC3LQ5T215 181 aa11.59□□□□□ -0.55
NCAM1-218ENST00000534516 ZNF496Q96IT1 587 aaPredicted RBP11.59□□□□□ -0.55
NCAM1-218ENST00000534516 THUMPD2Q9BTF0 503 aaKnown RBP11.59□□□□□ -0.55
NCAM1-218ENST00000534516 PRKRIP1Q9H875 184 aaPredicted RBP11.59□□□□□ -0.55
NCAM1-218ENST00000534516 ZNF790Q6PG37 636 aa11.58□□□□□ -0.56
NCAM1-218ENST00000534516 RASEFQ8IZ41 740 aa11.58□□□□□ -0.56
NCAM1-218ENST00000534516 MIS18AQ9NYP9 233 aa11.58□□□□□ -0.56
NCAM1-218ENST00000534516 SRP68Q9UHB9 627 aaKnown RBP11.58□□□□□ -0.56
NCAM1-218ENST00000534516 FBXO3Q9UK99 471 aa11.58□□□□□ -0.56
NCAM1-218ENST00000534516 PRAMEF22A3QJZ6 481 aa11.57□□□□□ -0.56
NCAM1-218ENST00000534516 BTBD11A6QL63 1104 aa11.57□□□□□ -0.56
NCAM1-218ENST00000534516 GYS1P13807 737 aa11.57□□□□□ -0.56
NCAM1-218ENST00000534516 CCDC146Q8IYE0 955 aa11.57□□□□□ -0.56
NCAM1-218ENST00000534516 CCDC87Q9NVE4 849 aa11.57□□□□□ -0.56
NCAM1-218ENST00000534516 ZBTB1Q9Y2K1 713 aa11.57□□□□□ -0.56
NCAM1-218ENST00000534516 ZNF316A6NFI3 1004 aaPredicted RBP11.56□□□□□ -0.56
NCAM1-218ENST00000534516 HMGB2P26583 209 aaKnown RBP11.56□□□□□ -0.56
NCAM1-218ENST00000534516 NFE2L2Q16236 605 aa11.56□□□□□ -0.56
NCAM1-218ENST00000534516 CCDC184Q52MB2 194 aa11.56□□□□□ -0.56
NCAM1-218ENST00000534516 TTC5Q8N0Z6 440 aa11.56□□□□□ -0.56
NCAM1-218ENST00000534516 RTF1Q92541 710 aaKnown RBP11.56□□□□□ -0.56
NCAM1-218ENST00000534516 ZBTB47Q9UFB7 747 aaPredicted RBP11.56□□□□□ -0.56
NCAM1-218ENST00000534516 SOS1Q07889 1333 aaPredicted RBP11.56□□□□□ -0.56
NCAM1-218ENST00000534516 HEG1Q9ULI3 1381 aa11.55□□□□□ -0.56
NCAM1-218ENST00000534516 KDM3BQ7LBC6 1761 aa11.55□□□□□ -0.56
NCAM1-218ENST00000534516 MMP10P09238 476 aa11.55□□□□□ -0.56
NCAM1-218ENST00000534516 CANXP27824 592 aaKnown RBP11.55□□□□□ -0.56
NCAM1-218ENST00000534516 RFC4P35249 363 aa11.55□□□□□ -0.56
NCAM1-218ENST00000534516 PIP4K2AP48426 406 aaPredicted RBP11.55□□□□□ -0.56
NCAM1-218ENST00000534516 RRP7AQ9Y3A4 280 aaKnown RBP11.55□□□□□ -0.56
NCAM1-218ENST00000534516 HTATSF1O43719 755 aaKnown RBP11.54□□□□□ -0.56
NCAM1-218ENST00000534516 VSIG10Q8N0Z9 540 aa11.54□□□□□ -0.56
NCAM1-218ENST00000534516 WWC3Q9ULE0 1092 aa11.54□□□□□ -0.56
NCAM1-218ENST00000534516 ADAMTS8Q9UP79 889 aa11.54□□□□□ -0.56
NCAM1-218ENST00000534516 KIAA1551Q9HCM1 1747 aa11.54□□□□□ -0.56
NCAM1-218ENST00000534516 USP42Q9H9J4 1324 aaKnown RBP11.54□□□□□ -0.56
NCAM1-218ENST00000534516 N4BP2Q86UW6 1770 aaPredicted RBP11.54□□□□□ -0.56
NCAM1-218ENST00000534516 A1BGP04217 495 aa11.53□□□□□ -0.56
NCAM1-218ENST00000534516 DDR1Q08345 913 aa11.53□□□□□ -0.56
NCAM1-218ENST00000534516 USPL1Q5W0Q7 1092 aa11.53□□□□□ -0.56
NCAM1-218ENST00000534516 PELP1Q8IZL8 1130 aaKnown RBP11.53□□□□□ -0.56
NCAM1-218ENST00000534516 MS4A3Q96HJ5 214 aa11.53□□□□□ -0.56
NCAM1-218ENST00000534516 FMNL2Q96PY5 1086 aa11.53□□□□□ -0.56
NCAM1-218ENST00000534516 USP16Q9Y5T5 823 aa11.53□□□□□ -0.56
NCAM1-218ENST00000534516 MAPK8IP3Q9UPT6 1336 aa11.53□□□□□ -0.56
NCAM1-218ENST00000534516 KIF13BQ9NQT8 1826 aa11.53□□□□□ -0.56
NCAM1-218ENST00000534516 YBX3P16989 372 aaKnown RBP eCLIP11.52□□□□□ -0.57
NCAM1-218ENST00000534516 TMPOP42166 694 aaKnown RBP11.52□□□□□ -0.57
NCAM1-218ENST00000534516 RIPK4P57078 832 aa11.52□□□□□ -0.57
NCAM1-218ENST00000534516 TAF7Q15545 349 aaPredicted RBP11.52□□□□□ -0.57
NCAM1-218ENST00000534516 NEUROD2Q15784 382 aa11.52□□□□□ -0.57
NCAM1-218ENST00000534516 NLGN1Q8N2Q7 840 aa11.52□□□□□ -0.57
NCAM1-218ENST00000534516 BCL2L12Q9HB09 334 aa11.52□□□□□ -0.57
NCAM1-218ENST00000534516 COL15A1P39059 1388 aa11.52□□□□□ -0.57
NCAM1-218ENST00000534516 AFDNP55196 1824 aaKnown RBP11.51□□□□□ -0.57
NCAM1-218ENST00000534516 STARD3NLO95772 234 aa11.51□□□□□ -0.57
NCAM1-218ENST00000534516 NEFMP07197 916 aa11.51□□□□□ -0.57
NCAM1-218ENST00000534516 EIF5P55010 431 aaKnown RBP11.51□□□□□ -0.57
NCAM1-218ENST00000534516 CD2APQ9Y5K6 639 aa11.51□□□□□ -0.57
NCAM1-218ENST00000534516 CHD4Q14839 1912 aa11.5□□□□□ -0.57
NCAM1-218ENST00000534516 LAMB4A4D0S4 1761 aa11.5□□□□□ -0.57
NCAM1-218ENST00000534516 SENP3-EIF4A1A0A087X0R7 540 aa11.5□□□□□ -0.57
NCAM1-218ENST00000534516 NUBP1P53384 320 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms