RNA–Protein interactions for RNA: ENST00000534404.1

LRP4-205, Transcript of LDL receptor related protein 4, humanhuman

TSL 5

Gene LRP4, Length 663 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP4-205ENST00000534404 NFE2L2Q16236 605 aa43.71■■■■■ 4.59
LRP4-205ENST00000534404 USP42Q9H9J4 1324 aaKnown RBP43.71■■■■■ 4.59
LRP4-205ENST00000534404 CANXP27824 592 aaKnown RBP43.7■■■■■ 4.59
LRP4-205ENST00000534404 PRKRIP1Q9H875 184 aaPredicted RBP43.69■■■■■ 4.58
LRP4-205ENST00000534404 PARP3Q9Y6F1 533 aa43.69■■■■■ 4.58
LRP4-205ENST00000534404 TAF7Q15545 349 aaPredicted RBP43.66■■■■■ 4.58
LRP4-205ENST00000534404 COL15A1P39059 1388 aa43.66■■■■■ 4.58
LRP4-205ENST00000534404 WDR43Q15061 677 aaKnown RBP eCLIP43.64■■■■■ 4.58
LRP4-205ENST00000534404 USPL1Q5W0Q7 1092 aa43.64■■■■■ 4.58
LRP4-205ENST00000534404 FKBP8Q14318 412 aa43.63■■■■■ 4.57
LRP4-205ENST00000534404 DLG5Q8TDM6 1919 aa43.63■■■■■ 4.57
LRP4-205ENST00000534404 ZNF330Q9Y3S2 320 aaPredicted RBP43.61■■■■■ 4.57
LRP4-205ENST00000534404 NARFQ9UHQ1 456 aa43.6■■■■■ 4.57
LRP4-205ENST00000534404 NPM2Q86SE8 214 aaKnown RBP43.58■■■■■ 4.57
LRP4-205ENST00000534404 MIS18AQ9NYP9 233 aa43.58■■■■■ 4.57
LRP4-205ENST00000534404 PNISRQ8TF01 805 aaKnown RBP43.57■■■■■ 4.57
LRP4-205ENST00000534404 A0A087WZG4 1122 aa43.56■■■■■ 4.56
LRP4-205ENST00000534404 ZNF316A6NFI3 1004 aaPredicted RBP43.56■■■■■ 4.56
LRP4-205ENST00000534404 SNRPA1P09661 255 aaKnown RBP43.56■■■■■ 4.56
LRP4-205ENST00000534404 GRIN3BO60391 1043 aa43.55■■■■■ 4.56
LRP4-205ENST00000534404 YBX3P16989 372 aaKnown RBP eCLIP43.55■■■■■ 4.56
LRP4-205ENST00000534404 EIF5P55010 431 aaKnown RBP43.55■■■■■ 4.56
LRP4-205ENST00000534404 RIPK4P57078 832 aa43.55■■■■■ 4.56
LRP4-205ENST00000534404 THUMPD2Q9BTF0 503 aaKnown RBP43.55■■■■■ 4.56
LRP4-205ENST00000534404 A1BGP04217 495 aa43.54■■■■■ 4.56
LRP4-205ENST00000534404 CCDC146Q8IYE0 955 aa43.54■■■■■ 4.56
LRP4-205ENST00000534404 USP16Q9Y5T5 823 aa43.54■■■■■ 4.56
LRP4-205ENST00000534404 WWC3Q9ULE0 1092 aa43.53■■■■■ 4.56
LRP4-205ENST00000534404 PRAMEF22A3QJZ6 481 aa43.51■■■■■ 4.56
LRP4-205ENST00000534404 IL6STP40189 918 aaPredicted RBP43.51■■■■■ 4.56
LRP4-205ENST00000534404 TM4SF1P30408 202 aa43.49■■■■■ 4.55
LRP4-205ENST00000534404 TMPOP42166 694 aaKnown RBP43.49■■■■■ 4.55
LRP4-205ENST00000534404 TGFB2P61812 414 aa43.49■■■■■ 4.55
LRP4-205ENST00000534404 DDR1Q08345 913 aa43.49■■■■■ 4.55
LRP4-205ENST00000534404 C10orf71Q711Q0 1435 aa43.48■■■■■ 4.55
LRP4-205ENST00000534404 ADAMTS8Q9UP79 889 aa43.48■■■■■ 4.55
LRP4-205ENST00000534404 LMOD3Q0VAK6 560 aa43.47■■■■■ 4.55
LRP4-205ENST00000534404 RUNDC1Q96C34 613 aa43.47■■■■■ 4.55
LRP4-205ENST00000534404 NEUROD2Q15784 382 aa43.46■■■■■ 4.55
LRP4-205ENST00000534404 TBC1D2BQ9UPU7 963 aa43.46■■■■■ 4.55
LRP4-205ENST00000534404 RRP7AQ9Y3A4 280 aaKnown RBP43.46■■■■■ 4.55
LRP4-205ENST00000534404 POLRMTO00411 1230 aaKnown RBP43.45■■■■■ 4.55
LRP4-205ENST00000534404 CHD4Q14839 1912 aa43.44■■■■■ 4.54
LRP4-205ENST00000534404 KIF13BQ9NQT8 1826 aa43.44■■■■■ 4.54
LRP4-205ENST00000534404 NFIXQ14938 502 aa43.44■■■■■ 4.54
LRP4-205ENST00000534404 BCL2L12Q9HB09 334 aa43.44■■■■■ 4.54
LRP4-205ENST00000534404 A0A0G2JLW4 131 aa43.43■■■■■ 4.54
LRP4-205ENST00000534404 PIP4K2AP48426 406 aaPredicted RBP43.43■■■■■ 4.54
LRP4-205ENST00000534404 PXDNLA1KZ92 1463 aa43.42■■■■■ 4.54
LRP4-205ENST00000534404 BICDL1Q6ZP65 573 aa43.41■■■■■ 4.54
LRP4-205ENST00000534404 UTRNP46939 3433 aa43.39■■■■■ 4.54
LRP4-205ENST00000534404 TSPYL4Q9UJ04 414 aa43.39■■■■■ 4.54
LRP4-205ENST00000534404 KDM3BQ7LBC6 1761 aa43.39■■■■■ 4.54
LRP4-205ENST00000534404 DPEP1P16444 411 aa43.38■■■■■ 4.53
LRP4-205ENST00000534404 N4BP2Q86UW6 1770 aaPredicted RBP43.38■■■■■ 4.53
LRP4-205ENST00000534404 EIF4A1P60842 406 aaKnown RBP43.37■■■■■ 4.53
LRP4-205ENST00000534404 DZIP3Q86Y13 1208 aaKnown RBP43.37■■■■■ 4.53
LRP4-205ENST00000534404 SERPINB2P05120 415 aa43.36■■■■■ 4.53
LRP4-205ENST00000534404 GIGYF1O75420 1035 aaPredicted RBP43.34■■■■■ 4.53
LRP4-205ENST00000534404 BCS1LQ9Y276 419 aa43.34■■■■■ 4.53
LRP4-205ENST00000534404 TBC1D9BQ66K14 1250 aa43.33■■■■■ 4.53
LRP4-205ENST00000534404 KIAA1551Q9HCM1 1747 aa43.32■■■■■ 4.53
LRP4-205ENST00000534404 SCN7AQ01118 1682 aa43.31■■■■■ 4.52
LRP4-205ENST00000534404 GOLGB1Q14789 3259 aaKnown RBP43.31■■■■■ 4.52
LRP4-205ENST00000534404 CAMTA2O94983 1202 aa43.3■■■■■ 4.52
LRP4-205ENST00000534404 NBPF26B4DH59 902 aa43.29■■■■■ 4.52
LRP4-205ENST00000534404 NBPF10Q6P3W6 841 aaKnown RBP43.29■■■■■ 4.52
LRP4-205ENST00000534404 NBPF15Q8N660 670 aa43.29■■■■■ 4.52
LRP4-205ENST00000534404 LAMB4A4D0S4 1761 aa43.29■■■■■ 4.52
LRP4-205ENST00000534404 ANP32CO43423 234 aa43.28■■■■■ 4.52
LRP4-205ENST00000534404 BABAM1Q9NWV8 329 aa43.28■■■■■ 4.52
LRP4-205ENST00000534404 ZNF784Q8NCA9 323 aaPredicted RBP43.27■■■■■ 4.52
LRP4-205ENST00000534404 SETDB2Q96T68 719 aa43.26■■■■■ 4.52
LRP4-205ENST00000534404 PIM2Q9P1W9 311 aa43.26■■■■■ 4.52
LRP4-205ENST00000534404 TRIM35Q9UPQ4 493 aa43.26■■■■■ 4.52
LRP4-205ENST00000534404 LAS1LQ9Y4W2 734 aaKnown RBP43.26■■■■■ 4.52
LRP4-205ENST00000534404 AFDNP55196 1824 aaKnown RBP43.26■■■■■ 4.52
LRP4-205ENST00000534404 KCNA3P22001 575 aa43.24■■■■■ 4.51
LRP4-205ENST00000534404 CHRNA5P30532 468 aa43.24■■■■■ 4.51
LRP4-205ENST00000534404 ZNF652Q9Y2D9 606 aa43.24■■■■■ 4.51
LRP4-205ENST00000534404 NGEFQ8N5V2 710 aa43.23■■■■■ 4.51
LRP4-205ENST00000534404 CARMIL3Q8ND23 1372 aa43.23■■■■■ 4.51
LRP4-205ENST00000534404 NPHP1O15259 732 aa43.22■■■■■ 4.51
LRP4-205ENST00000534404 NRXN2Q9P2S2 1712 aa43.22■■■■■ 4.51
LRP4-205ENST00000534404 CLEC4GQ6UXB4 293 aa43.2■■■■■ 4.51
LRP4-205ENST00000534404 BCORQ6W2J9 1755 aa43.2■■■■■ 4.51
LRP4-205ENST00000534404 APAF1O14727 1248 aa43.18■■■■■ 4.5
LRP4-205ENST00000534404 MYL6BP14649 208 aa43.18■■■■■ 4.5
LRP4-205ENST00000534404 CCDC184Q52MB2 194 aa43.18■■■■■ 4.5
LRP4-205ENST00000534404 DALRD3Q5D0E6 543 aaKnown RBP43.18■■■■■ 4.5
LRP4-205ENST00000534404 EIF2S2P20042 333 aaKnown RBP43.16■■■■■ 4.5
LRP4-205ENST00000534404 ARHGAP27Q6ZUM4 889 aa43.15■■■■■ 4.5
LRP4-205ENST00000534404 BRCA1P38398 1863 aaKnown RBP43.14■■■■■ 4.5
LRP4-205ENST00000534404 CHL1O00533 1208 aa43.13■■■■■ 4.49
LRP4-205ENST00000534404 PRR5LQ6MZQ0 368 aa43.13■■■■■ 4.49
LRP4-205ENST00000534404 C2CD5Q86YS7 1000 aa43.13■■■■■ 4.49
LRP4-205ENST00000534404 CNBD1Q8NA66 436 aa43.13■■■■■ 4.49
LRP4-205ENST00000534404 H0YIN7 160 aa43.12■■■■■ 4.49
LRP4-205ENST00000534404 KIF6Q6ZMV9 814 aa43.12■■■■■ 4.49
LRP4-205ENST00000534404 CCDC24Q8N4L8 307 aa43.12■■■■■ 4.49
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms