RNA–Protein interactions for RNA: ENST00000534207.5

CHID1-223, Transcript of chitinase domain containing 1, humanhuman

TSL 5

Gene CHID1, Length 1,171 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHID1-223ENST00000534207 STARD3NLO95772 234 aa23.27■■□□□ 1.32
CHID1-223ENST00000534207 CT47B1P0C2W7 299 aaPredicted RBP23.27■■□□□ 1.32
CHID1-223ENST00000534207 DNAJC10Q8IXB1 793 aa23.26■■□□□ 1.31
CHID1-223ENST00000534207 CYP19A1P11511 503 aaPredicted RBP23.25■■□□□ 1.31
CHID1-223ENST00000534207 C8orf58Q8NAV2 365 aa23.24■■□□□ 1.31
CHID1-223ENST00000534207 LINC00116Q8NCU8 138 aa23.24■■□□□ 1.31
CHID1-223ENST00000534207 ZNF428Q96B54 188 aa23.24■■□□□ 1.31
CHID1-223ENST00000534207 EXOSC9Q06265 439 aaKnown RBP23.23■■□□□ 1.31
CHID1-223ENST00000534207 TWISTNBQ3B726 338 aaPredicted RBP23.23■■□□□ 1.31
CHID1-223ENST00000534207 USP16Q9Y5T5 823 aa23.23■■□□□ 1.31
CHID1-223ENST00000534207 CRKLP46109 303 aaKnown RBP23.21■■□□□ 1.31
CHID1-223ENST00000534207 KRT24Q2M2I5 525 aa23.21■■□□□ 1.31
CHID1-223ENST00000534207 CCDC87Q9NVE4 849 aa23.21■■□□□ 1.31
CHID1-223ENST00000534207 C4AP0C0L4 1744 aa23.2■■□□□ 1.3
CHID1-223ENST00000534207 PRAMEF22A3QJZ6 481 aa23.2■■□□□ 1.3
CHID1-223ENST00000534207 TSPYL6Q8N831 410 aa23.2■■□□□ 1.3
CHID1-223ENST00000534207 AKT1S1Q96B36 256 aa23.2■■□□□ 1.3
CHID1-223ENST00000534207 YTHDC1Q96MU7 727 aaKnown RBP23.2■■□□□ 1.3
CHID1-223ENST00000534207 VAMP4O75379 141 aa23.19■■□□□ 1.3
CHID1-223ENST00000534207 KCNQ4P56696 695 aa23.19■■□□□ 1.3
CHID1-223ENST00000534207 NBPF14Q5TI25 921 aa23.19■■□□□ 1.3
CHID1-223ENST00000534207 HDGFL1Q5TGJ6 251 aa23.18■■□□□ 1.3
CHID1-223ENST00000534207 INTS5Q6P9B9 1019 aaKnown RBP23.18■■□□□ 1.3
CHID1-223ENST00000534207 RPS6KA4O75676 772 aa23.17■■□□□ 1.3
CHID1-223ENST00000534207 ADRA2BP18089 450 aa23.17■■□□□ 1.3
CHID1-223ENST00000534207 IL6STP40189 918 aaPredicted RBP23.17■■□□□ 1.3
CHID1-223ENST00000534207 CCDC30Q5VVM6 783 aa23.17■■□□□ 1.3
CHID1-223ENST00000534207 AK7Q96M32 723 aa23.17■■□□□ 1.3
CHID1-223ENST00000534207 STK32BQ9NY57 414 aa23.17■■□□□ 1.3
CHID1-223ENST00000534207 BCORQ6W2J9 1755 aa23.17■■□□□ 1.3
CHID1-223ENST00000534207 SLC15A2Q16348 729 aa23.16■■□□□ 1.3
CHID1-223ENST00000534207 FLAD1Q8NFF5 587 aa23.16■■□□□ 1.3
CHID1-223ENST00000534207 DBF4Q9UBU7 674 aaPredicted RBP23.16■■□□□ 1.3
CHID1-223ENST00000534207 ELL2O00472 640 aaPredicted RBP23.15■■□□□ 1.3
CHID1-223ENST00000534207 SSFA2P28290 1259 aa23.15■■□□□ 1.3
CHID1-223ENST00000534207 DDX21Q9NR30 783 aaKnown RBP eCLIP23.15■■□□□ 1.3
CHID1-223ENST00000534207 ZBTB1Q9Y2K1 713 aa23.15■■□□□ 1.3
CHID1-223ENST00000534207 SCN7AQ01118 1682 aa23.14■■□□□ 1.29
CHID1-223ENST00000534207 EIF2S2P20042 333 aaKnown RBP23.14■■□□□ 1.29
CHID1-223ENST00000534207 ZNF827Q17R98 1081 aa23.14■■□□□ 1.29
CHID1-223ENST00000534207 RTCBQ9Y3I0 505 aaKnown RBP23.14■■□□□ 1.29
CHID1-223ENST00000534207 GNPATO15228 680 aa23.13■■□□□ 1.29
CHID1-223ENST00000534207 A1BGP04217 495 aa23.13■■□□□ 1.29
CHID1-223ENST00000534207 EIF5P55010 431 aaKnown RBP23.13■■□□□ 1.29
CHID1-223ENST00000534207 PDIA6Q15084 440 aa23.13■■□□□ 1.29
CHID1-223ENST00000534207 ALDH1L2Q3SY69 923 aa23.13■■□□□ 1.29
CHID1-223ENST00000534207 ANO8Q9HCE9 1232 aaPredicted RBP23.13■■□□□ 1.29
CHID1-223ENST00000534207 CASZ1Q86V15 1759 aa23.13■■□□□ 1.29
CHID1-223ENST00000534207 NBPF26B4DH59 902 aa23.12■■□□□ 1.29
CHID1-223ENST00000534207 NBPF10Q6P3W6 841 aaKnown RBP23.12■■□□□ 1.29
CHID1-223ENST00000534207 NBPF15Q8N660 670 aa23.12■■□□□ 1.29
CHID1-223ENST00000534207 STK31Q9BXU1 1019 aa23.12■■□□□ 1.29
CHID1-223ENST00000534207 COL15A1P39059 1388 aa23.12■■□□□ 1.29
CHID1-223ENST00000534207 A0A087WZG4 1122 aa23.11■■□□□ 1.29
CHID1-223ENST00000534207 RGL2O15211 777 aa23.11■■□□□ 1.29
CHID1-223ENST00000534207 LRP10Q7Z4F1 713 aa23.11■■□□□ 1.29
CHID1-223ENST00000534207 HYPKQ9NX55 129 aa23.11■■□□□ 1.29
CHID1-223ENST00000534207 COL24A1Q17RW2 1714 aa23.11■■□□□ 1.29
CHID1-223ENST00000534207 TFCP2L1Q9NZI6 479 aa23.1■■□□□ 1.29
CHID1-223ENST00000534207 CHPF2Q9P2E5 772 aa23.1■■□□□ 1.29
CHID1-223ENST00000534207 NUP98P52948 1817 aa23.1■■□□□ 1.29
CHID1-223ENST00000534207 CANXP27824 592 aaKnown RBP23.09■■□□□ 1.29
CHID1-223ENST00000534207 BRPF1P55201 1214 aaPredicted RBP23.09■■□□□ 1.29
CHID1-223ENST00000534207 ANKRD36CQ5JPF3 1778 aa23.09■■□□□ 1.29
CHID1-223ENST00000534207 TRAPPC3LQ5T215 181 aa23.08■■□□□ 1.29
CHID1-223ENST00000534207 NPM2Q86SE8 214 aaKnown RBP23.08■■□□□ 1.29
CHID1-223ENST00000534207 ARFGEF2Q9Y6D5 1785 aa23.08■■□□□ 1.29
CHID1-223ENST00000534207 PNPLA7Q6ZV29 1317 aa23.08■■□□□ 1.28
CHID1-223ENST00000534207 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.06■■□□□ 1.28
CHID1-223ENST00000534207 NECTIN2Q92692 538 aa23.06■■□□□ 1.28
CHID1-223ENST00000534207 RARSP54136 660 aaKnown RBP23.05■■□□□ 1.28
CHID1-223ENST00000534207 PROSER3Q2NL68 480 aa23.05■■□□□ 1.28
CHID1-223ENST00000534207 N4BP2Q86UW6 1770 aaPredicted RBP23.04■■□□□ 1.28
CHID1-223ENST00000534207 MYL6BP14649 208 aa23.04■■□□□ 1.28
CHID1-223ENST00000534207 AMIGO3Q86WK7 504 aa23.04■■□□□ 1.28
CHID1-223ENST00000534207 ARHGEF1Q92888 912 aaKnown RBP23.04■■□□□ 1.28
CHID1-223ENST00000534207 NARFQ9UHQ1 456 aa23.04■■□□□ 1.28
CHID1-223ENST00000534207 SLC4A2P04920 1241 aa23.03■■□□□ 1.28
CHID1-223ENST00000534207 SLC16A10Q8TF71 515 aa23.03■■□□□ 1.28
CHID1-223ENST00000534207 SSH1Q8WYL5 1049 aa23.03■■□□□ 1.28
CHID1-223ENST00000534207 USP42Q9H9J4 1324 aaKnown RBP23.03■■□□□ 1.28
CHID1-223ENST00000534207 ERVV-1B6SEH8 477 aa23.02■■□□□ 1.28
CHID1-223ENST00000534207 RFC4P35249 363 aa23.02■■□□□ 1.28
CHID1-223ENST00000534207 PIP4K2AP48426 406 aaPredicted RBP23.02■■□□□ 1.28
CHID1-223ENST00000534207 COL23A1Q86Y22 540 aaPredicted RBP23.02■■□□□ 1.28
CHID1-223ENST00000534207 MRPL50Q8N5N7 158 aaKnown RBP23.02■■□□□ 1.28
CHID1-223ENST00000534207 DZIP3Q86Y13 1208 aaKnown RBP23.01■■□□□ 1.27
CHID1-223ENST00000534207 KIF16BQ96L93 1317 aa23.01■■□□□ 1.27
CHID1-223ENST00000534207 PHF14O94880 888 aa23■■□□□ 1.27
CHID1-223ENST00000534207 DDX58O95786 925 aaKnown RBP23■■□□□ 1.27
CHID1-223ENST00000534207 ANXA1P04083 346 aa23■■□□□ 1.27
CHID1-223ENST00000534207 CLEC4GQ6UXB4 293 aa23■■□□□ 1.27
CHID1-223ENST00000534207 KIF6Q6ZMV9 814 aa23■■□□□ 1.27
CHID1-223ENST00000534207 COPS6Q7L5N1 327 aa23■■□□□ 1.27
CHID1-223ENST00000534207 XAGE3Q8WTP9 111 aa23■■□□□ 1.27
CHID1-223ENST00000534207 SMC4Q9NTJ3 1288 aa23■■□□□ 1.27
CHID1-223ENST00000534207 PTPRCP08575 1304 aa23■■□□□ 1.27
CHID1-223ENST00000534207 MAP3K15Q6ZN16 1313 aa23■■□□□ 1.27
CHID1-223ENST00000534207 ZPR1O75312 459 aa22.99■■□□□ 1.27
CHID1-223ENST00000534207 FLIIQ13045 1269 aa22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms