RNA–Protein interactions for RNA: ENST00000533996.5

SOX9-AS1-213, SOX9 antisense RNA 1, humanhuman

TSL 5

Gene SOX9-AS1, Length 1,001 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-AS1-213ENST00000533996 ARHGEF1Q92888 912 aaKnown RBP13.02□□□□□ -0.33
SOX9-AS1-213ENST00000533996 SIN3AQ96ST3 1273 aa13.02□□□□□ -0.33
SOX9-AS1-213ENST00000533996 SLC34A2O95436 690 aa13.01□□□□□ -0.33
SOX9-AS1-213ENST00000533996 PRKAR2AP13861 404 aaKnown RBP13.01□□□□□ -0.33
SOX9-AS1-213ENST00000533996 RFC4P35249 363 aa13.01□□□□□ -0.33
SOX9-AS1-213ENST00000533996 NCAPD2Q15021 1401 aa13.01□□□□□ -0.33
SOX9-AS1-213ENST00000533996 COL5A3P25940 1745 aaPredicted RBP13□□□□□ -0.33
SOX9-AS1-213ENST00000533996 TONSLQ96HA7 1378 aa13□□□□□ -0.33
SOX9-AS1-213ENST00000533996 RPS6KA4O75676 772 aa13□□□□□ -0.33
SOX9-AS1-213ENST00000533996 VEGFAP15692 232 aaPredicted RBP13□□□□□ -0.33
SOX9-AS1-213ENST00000533996 CHRDL2Q6WN34 429 aa13□□□□□ -0.33
SOX9-AS1-213ENST00000533996 IFNL2Q8IZJ0 200 aa13□□□□□ -0.33
SOX9-AS1-213ENST00000533996 ATG3Q9NT62 314 aa13□□□□□ -0.33
SOX9-AS1-213ENST00000533996 FARP1Q9Y4F1 1045 aaPredicted RBP13□□□□□ -0.33
SOX9-AS1-213ENST00000533996 CNTNAP4Q9C0A0 1308 aa12.99□□□□□ -0.33
SOX9-AS1-213ENST00000533996 NEUROD1Q13562 356 aa12.99□□□□□ -0.33
SOX9-AS1-213ENST00000533996 BBXQ8WY36 941 aaPredicted RBP12.99□□□□□ -0.33
SOX9-AS1-213ENST00000533996 KDRP35968 1356 aa12.98□□□□□ -0.33
SOX9-AS1-213ENST00000533996 KIF20BQ96Q89 1820 aa12.98□□□□□ -0.33
SOX9-AS1-213ENST00000533996 GLTPD2A6NH11 291 aa12.98□□□□□ -0.33
SOX9-AS1-213ENST00000533996 GGNBP2Q9H3C7 697 aa12.98□□□□□ -0.33
SOX9-AS1-213ENST00000533996 TAOK2Q9UL54 1235 aa12.98□□□□□ -0.33
SOX9-AS1-213ENST00000533996 KDM6AO15550 1401 aaPredicted RBP12.97□□□□□ -0.33
SOX9-AS1-213ENST00000533996 PHKG2P15735 406 aa12.97□□□□□ -0.33
SOX9-AS1-213ENST00000533996 TESK2Q96S53 571 aa12.97□□□□□ -0.33
SOX9-AS1-213ENST00000533996 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.97□□□□□ -0.33
SOX9-AS1-213ENST00000533996 ERVV-2B6SEH9 535 aa12.96□□□□□ -0.33
SOX9-AS1-213ENST00000533996 CCDC88AQ3V6T2 1871 aa12.95□□□□□ -0.34
SOX9-AS1-213ENST00000533996 MYH14Q7Z406 1995 aaKnown RBP12.95□□□□□ -0.34
SOX9-AS1-213ENST00000533996 CHRM1P11229 460 aaPredicted RBP12.95□□□□□ -0.34
SOX9-AS1-213ENST00000533996 LMNB1P20700 586 aa12.95□□□□□ -0.34
SOX9-AS1-213ENST00000533996 SLC4A9Q96Q91 983 aa12.95□□□□□ -0.34
SOX9-AS1-213ENST00000533996 PRDM10Q9NQV6 1147 aa12.95□□□□□ -0.34
SOX9-AS1-213ENST00000533996 PCDH10Q9P2E7 1040 aa12.95□□□□□ -0.34
SOX9-AS1-213ENST00000533996 ANKRD26Q9UPS8 1709 aa12.94□□□□□ -0.34
SOX9-AS1-213ENST00000533996 HSP90AB1P08238 724 aaKnown RBP12.94□□□□□ -0.34
SOX9-AS1-213ENST00000533996 WASHC2AQ641Q2 1341 aa12.93□□□□□ -0.34
SOX9-AS1-213ENST00000533996 ST20-MTHFSA0A0A6YYL1 179 aa12.93□□□□□ -0.34
SOX9-AS1-213ENST00000533996 RIOK3O14730 519 aaKnown RBP12.93□□□□□ -0.34
SOX9-AS1-213ENST00000533996 TM4SF1P30408 202 aa12.92□□□□□ -0.34
SOX9-AS1-213ENST00000533996 DPY19L2Q6NUT2 758 aa12.92□□□□□ -0.34
SOX9-AS1-213ENST00000533996 RNF25Q96BH1 459 aaPredicted RBP12.92□□□□□ -0.34
SOX9-AS1-213ENST00000533996 EYA1Q99502 592 aa12.92□□□□□ -0.34
SOX9-AS1-213ENST00000533996 EMILIN1Q9Y6C2 1016 aa12.92□□□□□ -0.34
SOX9-AS1-213ENST00000533996 DLEC1Q9Y238 1755 aa12.92□□□□□ -0.34
SOX9-AS1-213ENST00000533996 USP42Q9H9J4 1324 aaKnown RBP12.91□□□□□ -0.34
SOX9-AS1-213ENST00000533996 TIAM2Q8IVF5 1701 aa12.91□□□□□ -0.34
SOX9-AS1-213ENST00000533996 CHRNA5P30532 468 aa12.91□□□□□ -0.34
SOX9-AS1-213ENST00000533996 PIP4P2Q8N4L2 257 aa12.91□□□□□ -0.34
SOX9-AS1-213ENST00000533996 DICER1Q9UPY3 1922 aaKnown RBP12.9□□□□□ -0.34
SOX9-AS1-213ENST00000533996 POLRMTO00411 1230 aaKnown RBP12.9□□□□□ -0.34
SOX9-AS1-213ENST00000533996 DDR1Q08345 913 aa12.9□□□□□ -0.34
SOX9-AS1-213ENST00000533996 POTECB2RU33 542 aa12.89□□□□□ -0.35
SOX9-AS1-213ENST00000533996 CRKLP46109 303 aaKnown RBP12.89□□□□□ -0.35
SOX9-AS1-213ENST00000533996 RASSF7Q02833 373 aa12.89□□□□□ -0.35
SOX9-AS1-213ENST00000533996 NRXN2Q9P2S2 1712 aa12.88□□□□□ -0.35
SOX9-AS1-213ENST00000533996 AFDNP55196 1824 aaKnown RBP12.88□□□□□ -0.35
SOX9-AS1-213ENST00000533996 FOXN1O15353 648 aa12.88□□□□□ -0.35
SOX9-AS1-213ENST00000533996 PPM1GO15355 546 aaPredicted RBP12.88□□□□□ -0.35
SOX9-AS1-213ENST00000533996 CTCFP49711 727 aaPredicted RBP12.88□□□□□ -0.35
SOX9-AS1-213ENST00000533996 CDCA8Q53HL2 280 aa12.88□□□□□ -0.35
SOX9-AS1-213ENST00000533996 TTLL6Q8N841 843 aa12.88□□□□□ -0.35
SOX9-AS1-213ENST00000533996 TSPYL2Q9H2G4 693 aaPredicted RBP12.88□□□□□ -0.35
SOX9-AS1-213ENST00000533996 SRP68Q9UHB9 627 aaKnown RBP12.88□□□□□ -0.35
SOX9-AS1-213ENST00000533996 ADAMTS7Q9UKP4 1686 aa12.88□□□□□ -0.35
SOX9-AS1-213ENST00000533996 ZPR1O75312 459 aa12.87□□□□□ -0.35
SOX9-AS1-213ENST00000533996 PYGBP11216 843 aa12.87□□□□□ -0.35
SOX9-AS1-213ENST00000533996 CABP4P57796 275 aa12.87□□□□□ -0.35
SOX9-AS1-213ENST00000533996 HS6ST3Q8IZP7 471 aa12.87□□□□□ -0.35
SOX9-AS1-213ENST00000533996 CNTNAP1P78357 1384 aa12.86□□□□□ -0.35
SOX9-AS1-213ENST00000533996 PLEKHO1Q53GL0 409 aaPredicted RBP12.86□□□□□ -0.35
SOX9-AS1-213ENST00000533996 AIDAQ96BJ3 306 aa12.86□□□□□ -0.35
SOX9-AS1-213ENST00000533996 MKRN1Q9UHC7 482 aaKnown RBP12.86□□□□□ -0.35
SOX9-AS1-213ENST00000533996 VIRMAQ69YN4 1812 aaKnown RBP12.85□□□□□ -0.35
SOX9-AS1-213ENST00000533996 TJP1Q07157 1748 aa12.85□□□□□ -0.35
SOX9-AS1-213ENST00000533996 AMOTQ4VCS5 1084 aa12.85□□□□□ -0.35
SOX9-AS1-213ENST00000533996 PDZRN3Q9UPQ7 1066 aa12.85□□□□□ -0.35
SOX9-AS1-213ENST00000533996 H0YIN7 160 aa12.84□□□□□ -0.35
SOX9-AS1-213ENST00000533996 PTCD1O75127 700 aaKnown RBP12.84□□□□□ -0.35
SOX9-AS1-213ENST00000533996 FER1L6Q2WGJ9 1857 aa12.84□□□□□ -0.35
SOX9-AS1-213ENST00000533996 NFKBIEO00221 500 aa12.83□□□□□ -0.36
SOX9-AS1-213ENST00000533996 USPL1Q5W0Q7 1092 aa12.83□□□□□ -0.36
SOX9-AS1-213ENST00000533996 INTS5Q6P9B9 1019 aaKnown RBP12.83□□□□□ -0.36
SOX9-AS1-213ENST00000533996 CARD14Q9BXL6 1004 aa12.83□□□□□ -0.36
SOX9-AS1-213ENST00000533996 POLKQ9UBT6 870 aa12.83□□□□□ -0.36
SOX9-AS1-213ENST00000533996 NARFQ9UHQ1 456 aa12.83□□□□□ -0.36
SOX9-AS1-213ENST00000533996 SERPINB2P05120 415 aa12.82□□□□□ -0.36
SOX9-AS1-213ENST00000533996 MTHFSP49914 203 aa12.82□□□□□ -0.36
SOX9-AS1-213ENST00000533996 EIF4A2Q14240 407 aaKnown RBP12.82□□□□□ -0.36
SOX9-AS1-213ENST00000533996 ERFEQ4G0M1 354 aa12.82□□□□□ -0.36
SOX9-AS1-213ENST00000533996 NFATC2IPQ8NCF5 419 aa12.82□□□□□ -0.36
SOX9-AS1-213ENST00000533996 WBP1LQ9NX94 342 aa12.82□□□□□ -0.36
SOX9-AS1-213ENST00000533996 SCN4AP35499 1836 aa12.82□□□□□ -0.36
SOX9-AS1-213ENST00000533996 PASKQ96RG2 1323 aa12.82□□□□□ -0.36
SOX9-AS1-213ENST00000533996 LTBP3Q9NS15 1303 aa12.82□□□□□ -0.36
SOX9-AS1-213ENST00000533996 IQCA1LA6NCM1 817 aa12.81□□□□□ -0.36
SOX9-AS1-213ENST00000533996 NFIXQ14938 502 aa12.81□□□□□ -0.36
SOX9-AS1-213ENST00000533996 FAM161AQ3B820 660 aa12.81□□□□□ -0.36
SOX9-AS1-213ENST00000533996 ZNF530Q6P9A1 599 aaPredicted RBP12.81□□□□□ -0.36
SOX9-AS1-213ENST00000533996 PAXIP1Q6ZW49 1069 aaPredicted RBP12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms