RNA–Protein interactions for RNA: ENST00000533897.1

CTSC-208, Transcript of cathepsin C, humanhuman

TSL 2

Gene CTSC, Length 4,344 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSC-208ENST00000533897 MTX1Q13505 466 aa5.43□□□□□ -1.54
CTSC-208ENST00000533897 UTYO14607 1347 aa5.43□□□□□ -1.54
CTSC-208ENST00000533897 LSG1Q9H089 658 aaKnown RBP5.43□□□□□ -1.54
CTSC-208ENST00000533897 SPEF2Q9C093 1822 aa5.43□□□□□ -1.54
CTSC-208ENST00000533897 C4AP0C0L4 1744 aa5.43□□□□□ -1.54
CTSC-208ENST00000533897 C4BP0C0L5 1744 aa5.43□□□□□ -1.54
CTSC-208ENST00000533897 F6X3S4 739 aa5.42□□□□□ -1.54
CTSC-208ENST00000533897 TBX22Q9Y458 520 aa5.42□□□□□ -1.54
CTSC-208ENST00000533897 XIRP1Q702N8 1843 aaKnown RBP5.42□□□□□ -1.54
CTSC-208ENST00000533897 RRP9O43818 475 aaKnown RBP5.42□□□□□ -1.54
CTSC-208ENST00000533897 HOXC9P31274 260 aa5.42□□□□□ -1.54
CTSC-208ENST00000533897 HAP1P54257 671 aaPredicted RBP5.42□□□□□ -1.54
CTSC-208ENST00000533897 ABCA3Q99758 1704 aa5.42□□□□□ -1.54
CTSC-208ENST00000533897 FLIIQ13045 1269 aa5.42□□□□□ -1.54
CTSC-208ENST00000533897 FOXD4L1Q9NU39 408 aa5.42□□□□□ -1.54
CTSC-208ENST00000533897 MIS18AQ9NYP9 233 aa5.42□□□□□ -1.54
CTSC-208ENST00000533897 RBM27Q9P2N5 1060 aaKnown RBP5.42□□□□□ -1.54
CTSC-208ENST00000533897 RAD50Q92878 1312 aa5.42□□□□□ -1.54
CTSC-208ENST00000533897 REC8O95072 547 aa5.42□□□□□ -1.54
CTSC-208ENST00000533897 MX1P20591 662 aa5.42□□□□□ -1.54
CTSC-208ENST00000533897 MCTP1Q6DN14 999 aa5.42□□□□□ -1.54
CTSC-208ENST00000533897 GNAI2P04899 355 aa5.41□□□□□ -1.54
CTSC-208ENST00000533897 COL15A1P39059 1388 aa5.41□□□□□ -1.54
CTSC-208ENST00000533897 MCM2P49736 904 aa5.41□□□□□ -1.54
CTSC-208ENST00000533897 BEND3Q5T5X7 828 aa5.41□□□□□ -1.54
CTSC-208ENST00000533897 SENP3Q9H4L4 574 aaPredicted RBP5.41□□□□□ -1.54
CTSC-208ENST00000533897 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP5.41□□□□□ -1.54
CTSC-208ENST00000533897 PLEKHG2Q9H7P9 1386 aa5.41□□□□□ -1.54
CTSC-208ENST00000533897 SGSM2O43147 1006 aa5.41□□□□□ -1.54
CTSC-208ENST00000533897 TPM2P07951 284 aa5.41□□□□□ -1.54
CTSC-208ENST00000533897 HOXB7P09629 217 aa5.41□□□□□ -1.54
CTSC-208ENST00000533897 MCM5P33992 734 aa5.41□□□□□ -1.54
CTSC-208ENST00000533897 TSHZ3Q63HK5 1081 aa5.41□□□□□ -1.54
CTSC-208ENST00000533897 LRRCC1Q9C099 1032 aa5.41□□□□□ -1.54
CTSC-208ENST00000533897 MYH7P12883 1935 aa5.4□□□□□ -1.54
CTSC-208ENST00000533897 COL9A3Q14050 684 aaPredicted RBP5.4□□□□□ -1.54
CTSC-208ENST00000533897 CAVIN1Q6NZI2 390 aaKnown RBP5.4□□□□□ -1.54
CTSC-208ENST00000533897 KAZALD1Q96I82 304 aa5.4□□□□□ -1.54
CTSC-208ENST00000533897 SRCIN1Q9C0H9 1055 aa5.4□□□□□ -1.54
CTSC-208ENST00000533897 ZKSCAN5Q9Y2L8 839 aa5.4□□□□□ -1.54
CTSC-208ENST00000533897 DDX49Q9Y6V7 483 aaKnown RBP5.4□□□□□ -1.54
CTSC-208ENST00000533897 ARAP2Q8WZ64 1704 aa5.4□□□□□ -1.54
CTSC-208ENST00000533897 LRP10Q7Z4F1 713 aa5.4□□□□□ -1.54
CTSC-208ENST00000533897 EXOC6BQ9Y2D4 811 aa5.4□□□□□ -1.54
CTSC-208ENST00000533897 TOGARAM1Q9Y4F4 1720 aa5.4□□□□□ -1.55
CTSC-208ENST00000533897 AP5Z1O43299 807 aa5.4□□□□□ -1.55
CTSC-208ENST00000533897 ST18O60284 1047 aa5.4□□□□□ -1.55
CTSC-208ENST00000533897 GADD45BO75293 160 aaPredicted RBP5.4□□□□□ -1.55
CTSC-208ENST00000533897 GTF2F1P35269 517 aaKnown RBP eCLIP5.4□□□□□ -1.55
CTSC-208ENST00000533897 EIF4A1P60842 406 aaKnown RBP5.4□□□□□ -1.55
CTSC-208ENST00000533897 RUFY3Q7L099 469 aa5.4□□□□□ -1.55
CTSC-208ENST00000533897 ALDH8A1Q9H2A2 487 aaPredicted RBP5.4□□□□□ -1.55
CTSC-208ENST00000533897 SNX14Q9Y5W7 946 aa5.4□□□□□ -1.55
CTSC-208ENST00000533897 MED23Q9ULK4 1368 aa5.4□□□□□ -1.55
CTSC-208ENST00000533897 RASEFQ8IZ41 740 aa5.39□□□□□ -1.55
CTSC-208ENST00000533897 SPTLC3Q9NUV7 552 aa5.39□□□□□ -1.55
CTSC-208ENST00000533897 GNAT3A8MTJ3 354 aa5.39□□□□□ -1.55
CTSC-208ENST00000533897 PRPF40AO75400 957 aaKnown RBP5.39□□□□□ -1.55
CTSC-208ENST00000533897 TSPYL4Q9UJ04 414 aa5.39□□□□□ -1.55
CTSC-208ENST00000533897 LRRFIP2Q9Y608 721 aaKnown RBP5.39□□□□□ -1.55
CTSC-208ENST00000533897 CASZ1Q86V15 1759 aa5.39□□□□□ -1.55
CTSC-208ENST00000533897 GNAI3P08754 354 aa5.39□□□□□ -1.55
CTSC-208ENST00000533897 HYPKQ9NX55 129 aa5.39□□□□□ -1.55
CTSC-208ENST00000533897 RAB11FIP3O75154 756 aa5.39□□□□□ -1.55
CTSC-208ENST00000533897 HMMRO75330 724 aa5.39□□□□□ -1.55
CTSC-208ENST00000533897 LARGE1O95461 756 aa5.39□□□□□ -1.55
CTSC-208ENST00000533897 RBM43Q6ZSC3 357 aaKnown RBP5.39□□□□□ -1.55
CTSC-208ENST00000533897 PHAXQ9H814 394 aaKnown RBP5.39□□□□□ -1.55
CTSC-208ENST00000533897 DOCK2Q92608 1830 aa5.38□□□□□ -1.55
CTSC-208ENST00000533897 PDIA6Q15084 440 aa5.38□□□□□ -1.55
CTSC-208ENST00000533897 NECTIN1Q15223 517 aa5.38□□□□□ -1.55
CTSC-208ENST00000533897 CCDC30Q5VVM6 783 aa5.38□□□□□ -1.55
CTSC-208ENST00000533897 AMOTL2Q9Y2J4 779 aa5.38□□□□□ -1.55
CTSC-208ENST00000533897 KDM6AO15550 1401 aaPredicted RBP5.38□□□□□ -1.55
CTSC-208ENST00000533897 A0A1B0GUL6 1792 aa5.38□□□□□ -1.55
CTSC-208ENST00000533897 NBPF7P0C2Y1 421 aaPredicted RBP5.38□□□□□ -1.55
CTSC-208ENST00000533897 CYB5RLQ6IPT4 315 aa5.38□□□□□ -1.55
CTSC-208ENST00000533897 ANKRD36CQ5JPF3 1778 aa5.38□□□□□ -1.55
CTSC-208ENST00000533897 TTC41PQ6P2S7 1318 aa5.38□□□□□ -1.55
CTSC-208ENST00000533897 SYCE3A1L190 88 aa5.38□□□□□ -1.55
CTSC-208ENST00000533897 MBD3O95983 291 aa5.38□□□□□ -1.55
CTSC-208ENST00000533897 NEK4P51957 841 aa5.38□□□□□ -1.55
CTSC-208ENST00000533897 TAF7Q15545 349 aaPredicted RBP5.38□□□□□ -1.55
CTSC-208ENST00000533897 KIAA1211Q6ZU35 1233 aa5.38□□□□□ -1.55
CTSC-208ENST00000533897 TM6SF1Q9BZW5 370 aa5.38□□□□□ -1.55
CTSC-208ENST00000533897 ZSWIM6Q9HCJ5 1215 aa5.38□□□□□ -1.55
CTSC-208ENST00000533897 SETD1BQ9UPS6 1966 aaKnown RBP5.38□□□□□ -1.55
CTSC-208ENST00000533897 AKAP11Q9UKA4 1901 aa5.38□□□□□ -1.55
CTSC-208ENST00000533897 HDGFP51858 240 aaKnown RBP5.37□□□□□ -1.55
CTSC-208ENST00000533897 USP48Q86UV5 1035 aa5.37□□□□□ -1.55
CTSC-208ENST00000533897 CCDC171Q6TFL3 1326 aa5.37□□□□□ -1.55
CTSC-208ENST00000533897 TSGA10IPQ3SY00 556 aa5.37□□□□□ -1.55
CTSC-208ENST00000533897 RHPN1Q8TCX5 695 aa5.37□□□□□ -1.55
CTSC-208ENST00000533897 UVSSAQ2YD98 709 aa5.37□□□□□ -1.55
CTSC-208ENST00000533897 PPP1R42Q7Z4L9 355 aa5.37□□□□□ -1.55
CTSC-208ENST00000533897 KCPQ6ZWJ8 1503 aa5.37□□□□□ -1.55
CTSC-208ENST00000533897 WNK3Q9BYP7 1800 aa5.37□□□□□ -1.55
CTSC-208ENST00000533897 ZNF710Q8N1W2 664 aa5.37□□□□□ -1.55
CTSC-208ENST00000533897 IP6K1Q92551 441 aa5.37□□□□□ -1.55
CTSC-208ENST00000533897 PDCL3Q9H2J4 239 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms