RNA–Protein interactions for RNA: ENST00000533834.1

RNPC3-209, Transcript of RNA binding region (RNP1, RRM) containing 3, humanhuman

TSL 1 (best)

Gene RNPC3, Length 3,658 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNPC3-209ENST00000533834 KCNB2Q92953 911 aa8.92□□□□□ -0.98
RNPC3-209ENST00000533834 CHMP5Q9NZZ3 219 aa8.92□□□□□ -0.98
RNPC3-209ENST00000533834 KCNQ3O43525 872 aa8.92□□□□□ -0.98
RNPC3-209ENST00000533834 UNC5CLQ8IV45 518 aa8.92□□□□□ -0.98
RNPC3-209ENST00000533834 PHF8Q9UPP1 1060 aa8.92□□□□□ -0.98
RNPC3-209ENST00000533834 BECN1Q14457 450 aa8.91□□□□□ -0.98
RNPC3-209ENST00000533834 ROBO1Q9Y6N7 1651 aa8.91□□□□□ -0.98
RNPC3-209ENST00000533834 PHAXQ9H814 394 aaKnown RBP8.91□□□□□ -0.98
RNPC3-209ENST00000533834 DOCK2Q92608 1830 aa8.91□□□□□ -0.98
RNPC3-209ENST00000533834 SLKQ9H2G2 1235 aaPredicted RBP8.91□□□□□ -0.98
RNPC3-209ENST00000533834 CPDO75976 1380 aa8.9□□□□□ -0.98
RNPC3-209ENST00000533834 K7ELQ4 463 aaPredicted RBP8.9□□□□□ -0.98
RNPC3-209ENST00000533834 XRCC6P12956 609 aaKnown RBP eCLIP8.9□□□□□ -0.98
RNPC3-209ENST00000533834 CUL4AQ13619 759 aa8.9□□□□□ -0.98
RNPC3-209ENST00000533834 TAF7Q15545 349 aaPredicted RBP8.9□□□□□ -0.98
RNPC3-209ENST00000533834 GAS2L3Q86XJ1 694 aa8.9□□□□□ -0.98
RNPC3-209ENST00000533834 ZNF831Q5JPB2 1677 aa8.9□□□□□ -0.98
RNPC3-209ENST00000533834 TSPYL4Q9UJ04 414 aa8.9□□□□□ -0.98
RNPC3-209ENST00000533834 EPB41L2O43491 1005 aaKnown RBP8.9□□□□□ -0.99
RNPC3-209ENST00000533834 MYH7P12883 1935 aa8.9□□□□□ -0.99
RNPC3-209ENST00000533834 SLIT2O94813 1529 aa8.89□□□□□ -0.99
RNPC3-209ENST00000533834 PKP1Q13835 747 aa8.89□□□□□ -0.99
RNPC3-209ENST00000533834 RPAP1Q9BWH6 1393 aaPredicted RBP8.89□□□□□ -0.99
RNPC3-209ENST00000533834 NLRP6P59044 892 aa8.89□□□□□ -0.99
RNPC3-209ENST00000533834 AKAP11Q9UKA4 1901 aa8.89□□□□□ -0.99
RNPC3-209ENST00000533834 C4AP0C0L4 1744 aa8.89□□□□□ -0.99
RNPC3-209ENST00000533834 C4BP0C0L5 1744 aa8.89□□□□□ -0.99
RNPC3-209ENST00000533834 RTL5Q5HYW3 569 aaPredicted RBP8.89□□□□□ -0.99
RNPC3-209ENST00000533834 PALD1Q9ULE6 856 aa8.89□□□□□ -0.99
RNPC3-209ENST00000533834 ERBB3P21860 1342 aa8.88□□□□□ -0.99
RNPC3-209ENST00000533834 AKAP4Q5JQC9 854 aa8.88□□□□□ -0.99
RNPC3-209ENST00000533834 ORAI2Q96SN7 254 aa8.88□□□□□ -0.99
RNPC3-209ENST00000533834 MYH3P11055 1940 aa8.88□□□□□ -0.99
RNPC3-209ENST00000533834 USHBP1Q8N6Y0 703 aa8.88□□□□□ -0.99
RNPC3-209ENST00000533834 COL5A3P25940 1745 aaPredicted RBP8.88□□□□□ -0.99
RNPC3-209ENST00000533834 TNS3Q68CZ2 1445 aa8.87□□□□□ -0.99
RNPC3-209ENST00000533834 CHMLP26374 656 aa8.87□□□□□ -0.99
RNPC3-209ENST00000533834 TTC14Q96N46 770 aa8.87□□□□□ -0.99
RNPC3-209ENST00000533834 HAP1P54257 671 aaPredicted RBP8.87□□□□□ -0.99
RNPC3-209ENST00000533834 PROSER3Q2NL68 480 aa8.87□□□□□ -0.99
RNPC3-209ENST00000533834 ESYT1Q9BSJ8 1104 aa8.87□□□□□ -0.99
RNPC3-209ENST00000533834 ESF1Q9H501 851 aaKnown RBP8.87□□□□□ -0.99
RNPC3-209ENST00000533834 PRAMEF22A3QJZ6 481 aa8.87□□□□□ -0.99
RNPC3-209ENST00000533834 RNMTO43148 476 aaKnown RBP8.87□□□□□ -0.99
RNPC3-209ENST00000533834 GIGYF1O75420 1035 aaPredicted RBP8.87□□□□□ -0.99
RNPC3-209ENST00000533834 NBPF7P0C2Y1 421 aaPredicted RBP8.87□□□□□ -0.99
RNPC3-209ENST00000533834 LRRC59Q96AG4 307 aaKnown RBP8.87□□□□□ -0.99
RNPC3-209ENST00000533834 BCORQ6W2J9 1755 aa8.87□□□□□ -0.99
RNPC3-209ENST00000533834 CCDC30Q5VVM6 783 aa8.86□□□□□ -0.99
RNPC3-209ENST00000533834 ABTB2Q8N961 1025 aa8.86□□□□□ -0.99
RNPC3-209ENST00000533834 MYO5AQ9Y4I1 1855 aaKnown RBP8.86□□□□□ -0.99
RNPC3-209ENST00000533834 GCP02774 474 aa8.86□□□□□ -0.99
RNPC3-209ENST00000533834 GNAI2P04899 355 aa8.86□□□□□ -0.99
RNPC3-209ENST00000533834 CASP7P55210 303 aa8.86□□□□□ -0.99
RNPC3-209ENST00000533834 ST3GAL1Q11201 340 aa8.86□□□□□ -0.99
RNPC3-209ENST00000533834 NGDNQ8NEJ9 315 aaKnown RBP8.86□□□□□ -0.99
RNPC3-209ENST00000533834 COL9A3Q14050 684 aaPredicted RBP8.86□□□□□ -0.99
RNPC3-209ENST00000533834 RABEP1Q15276 862 aa8.86□□□□□ -0.99
RNPC3-209ENST00000533834 ANKLE2Q86XL3 938 aa8.86□□□□□ -0.99
RNPC3-209ENST00000533834 RRAGDQ9NQL2 400 aaPredicted RBP8.86□□□□□ -0.99
RNPC3-209ENST00000533834 LMBRD1Q9NUN5 540 aa8.86□□□□□ -0.99
RNPC3-209ENST00000533834 LRRFIP2Q9Y608 721 aaKnown RBP8.85□□□□□ -0.99
RNPC3-209ENST00000533834 COL5A2P05997 1499 aaPredicted RBP8.85□□□□□ -0.99
RNPC3-209ENST00000533834 TRAK2O60296 914 aa8.85□□□□□ -0.99
RNPC3-209ENST00000533834 SSFA2P28290 1259 aa8.85□□□□□ -0.99
RNPC3-209ENST00000533834 PANK2Q9BZ23 570 aa8.85□□□□□ -0.99
RNPC3-209ENST00000533834 LSG1Q9H089 658 aaKnown RBP8.85□□□□□ -0.99
RNPC3-209ENST00000533834 UPF2Q9HAU5 1272 aaKnown RBP8.85□□□□□ -0.99
RNPC3-209ENST00000533834 ERBB4Q15303 1308 aa8.85□□□□□ -0.99
RNPC3-209ENST00000533834 NUTM2GQ5VZR2 741 aa8.85□□□□□ -0.99
RNPC3-209ENST00000533834 KCNH5Q8NCM2 988 aa8.85□□□□□ -0.99
RNPC3-209ENST00000533834 CHPF2Q9P2E5 772 aa8.85□□□□□ -0.99
RNPC3-209ENST00000533834 AMPHP49418 695 aa8.84□□□□□ -0.99
RNPC3-209ENST00000533834 COL4A1P02462 1669 aa8.84□□□□□ -0.99
RNPC3-209ENST00000533834 HSPA4P34932 840 aa8.84□□□□□ -0.99
RNPC3-209ENST00000533834 TSHZ3Q63HK5 1081 aa8.84□□□□□ -0.99
RNPC3-209ENST00000533834 ZGPATQ8N5A5 531 aaKnown RBP8.84□□□□□ -0.99
RNPC3-209ENST00000533834 EXOC6BQ9Y2D4 811 aa8.84□□□□□ -0.99
RNPC3-209ENST00000533834 NUP98P52948 1817 aa8.84□□□□□ -0.99
RNPC3-209ENST00000533834 IGKV5-2P06315 115 aa8.84□□□□□ -0.99
RNPC3-209ENST00000533834 RFX5P48382 616 aaPredicted RBP8.84□□□□□ -0.99
RNPC3-209ENST00000533834 RBM33Q96EV2 1170 aaKnown RBP8.84□□□□□ -0.99
RNPC3-209ENST00000533834 MED23Q9ULK4 1368 aa8.83□□□□□ -1
RNPC3-209ENST00000533834 BAG4O95429 457 aaKnown RBP8.83□□□□□ -1
RNPC3-209ENST00000533834 MX1P20591 662 aa8.83□□□□□ -1
RNPC3-209ENST00000533834 ANAPC15P60006 121 aa8.83□□□□□ -1
RNPC3-209ENST00000533834 GPT2Q8TD30 523 aa8.83□□□□□ -1
RNPC3-209ENST00000533834 DISP2A7MBM2 1401 aa8.83□□□□□ -1
RNPC3-209ENST00000533834 FAM43AQ8N2R8 423 aa8.83□□□□□ -1
RNPC3-209ENST00000533834 LRRCC1Q9C099 1032 aa8.83□□□□□ -1
RNPC3-209ENST00000533834 DOT1LQ8TEK3 1739 aa8.82□□□□□ -1
RNPC3-209ENST00000533834 ERC2O15083 957 aa8.82□□□□□ -1
RNPC3-209ENST00000533834 GNAI3P08754 354 aa8.82□□□□□ -1
RNPC3-209ENST00000533834 ZNF445P59923 1031 aa8.82□□□□□ -1
RNPC3-209ENST00000533834 HSCBQ8IWL3 235 aa8.82□□□□□ -1
RNPC3-209ENST00000533834 BRD1O95696 1058 aa8.82□□□□□ -1
RNPC3-209ENST00000533834 COL14A1Q05707 1796 aaKnown RBP8.82□□□□□ -1
RNPC3-209ENST00000533834 RAD50Q92878 1312 aa8.82□□□□□ -1
RNPC3-209ENST00000533834 SASH1O94885 1247 aa8.82□□□□□ -1
RNPC3-209ENST00000533834 NSFL1CQ9UNZ2 370 aaKnown RBP8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms